BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg322266 Length=342 Score E Sequences producing significant alignments: (Bits) Value AT2G46130.1 | Symbols: WRKY43, ATWRKY43 | WRKY DNA-binding prot... 479 8e-135 > AT2G46130.1 | Symbols: WRKY43, ATWRKY43 | WRKY DNA-binding protein 43 | chr2:18957226-18957911 FORWARD LENGTH=600 Length=600 Score = 479 bits (259), Expect = 8e-135 Identities = 284/296 (96%), Gaps = 2/296 (1%) Strand=Plus/Plus Query 38 ATAAGAAGATGAAAAATCCGCGATTTGCGTTTCGCACAAAGAGTGATTCAGAT-TTACTT 96 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| || || Sbjct 57 ATAAGAAGATGAAAAATCCGCGATTTTCGTTTCGCACAAAGAGTGATGCAGATATT-CTC 115 Query 97 GATGATGGTTATCGATGGAGAAAGTACGGTCAGAAGTCCGTCAAGAACAGCTTGTATCCC 156 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 116 GATGATGGTTATCGATGGAGAAAGTACGGTCAGAAATCCGTCAAGAACAGCTTGTATCCC 175 Query 157 AGGAGCTATTATAGATGCACACAACACATGTGTAACGTGAAGAAGCAAGTTCAGAGGCTG 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176 AGGAGCTATTATAGATGCACACAACACATGTGTAACGTGAAGAAGCAAGTTCAGAGGCTG 235 Query 217 TCGAAGGAGACGAACATGGTGGAGACAACTTATGAAGGAATCCATAACCATCCTTGTGAG 276 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 236 TCGAAGGAGACGAGCATTGTGGAGACAACTTATGAAGGAATCCATAACCATCCTTGTGAG 295 Query 277 GAGCACATGCAAACCCTAACACCTCTTCTTCATCAAATGCAGTTCCTGTCTAAGTT 332 |||| ||||||||||||||| ||||||||||||||| |||||||||| |||||||| Sbjct 296 GAGCTCATGCAAACCCTAACTCCTCTTCTTCATCAATTGCAGTTCCTCTCTAAGTT 351 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15985144182 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5