BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg322371 Length=1983 Score E Sequences producing significant alignments: (Bits) Value AT2G47240.1 | Symbols: CER8, LACS1 | AMP-dependent synthetase a... 2377 0.0 > AT2G47240.1 | Symbols: CER8, LACS1 | AMP-dependent synthetase and ligase family protein | chr2:19392558-19397831 FORWARD LENGTH=2407 Length=2407 Score = 2377 bits (1287), Expect = 0.0 Identities = 1765/1997 (88%), Gaps = 28/1997 (1%) Strand=Plus/Plus Query 1 ATGAAGTGTTTCGCGGCAAAGGTGGAAGAAGGAGTTAAAGGGGA-AGATGGAAAGCCATC 59 ||||||| ||| ||||| ||||| ||||| ||||||||| || | ||| |||||||| || Sbjct 210 ATGAAGTCTTTTGCGGCTAAGGTAGAAGAGGGAGTTAAA-GGAATAGACGGAAAGCCGTC 268 Query 60 GGTAGGCCCGGTGTACCGGAATCTTTTGTCGGAGAAAGGTTTTCCTCCTCGA--GATTCT 117 |||||| |||||||||||||||||| ||||||| |||||||||||| | ||| |||||| Sbjct 269 GGTAGGTCCGGTGTACCGGAATCTTCTGTCGGAAAAAGGTTTTCCT-C-CGATTGATTCT 326 Query 118 GATATCACCACTACTTGGGACATTTTCAGTAAATCTGTGGAGAAATTTCCTGATAACAAG 177 || ||||||||| |||||||||||||||||||||| ||||||||||| ||||| || || Sbjct 327 GAGATCACCACTGCTTGGGACATTTTCAGTAAATCAGTGGAGAAATTCCCTGACAATAAT 386 Query 178 ATGCTTGGATGGCGTCAAATTGTGGATGAGAAGGTTGGACCGTATATGTGGAAAACGTAC 237 |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| Sbjct 387 ATGCTTGGATGGCGTCGAATTGTTGATGAGAAGGTTGGACCATATATGTGGAAAACGTAC 446 Query 238 AAGGATA-TATACGAAGAAGTTCT-CTTGATCGGTTCTGCACTACGAGCCGTCGGAGCTG 295 ||||| | |||||||||||||| | | ||| || |||||||||||||||| |||||||| Sbjct 447 AAGGA-AGTATACGAAGAAGTTTTGC-AGATTGGCTCTGCACTACGAGCCGCCGGAGCTG 504 Query 296 AACCTGGGTCTCGAGTGGGGATCTATGGAGCTAATTGTCCTCAGTGGATCATAGCAATGG 355 |||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||| Sbjct 505 AACCTGGGAGTCGAGTGGGGATCTACGGTGTTAATTGTCCTCAGTGGATCATAGCAATGG 564 Query 356 AGGCTTGTGCAGCTCACACTCTAATATGTGTACCTCTATATGATACATTGGGTTCAGGAG 415 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 565 AGGCTTGTGCAGCTCACACTCTAATCTGTGTACCTCTATATGATACATTGGGTTCAGGAG 624 Query 416 CAGTCGATTATATCGTTGATCACGCGGAAATCGATTTTGTGTTCGTCCA-GAACACCAAA 474 |||||||||| || || || || ||||||||||| |||||||| ||||| || ||||||| Sbjct 625 CAGTCGATTACATTGTAGAGCATGCGGAAATCGACTTTGTGTTTGTCCAAGA-CACCAAA 683 Query 475 ATTAGAGGACTTCTTGAGCCAGATTGCAAAGGTGCAAAACGTCTAAAAGCTATAGTTTCT 534 |||| ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 684 ATTAAAGGACTTCTTGAGCCAGATTGCAAATGTGCTAAACGGCTAAAAGCTATAGTTTCC 743 Query 535 TTCACTAATGTGGGCGAAGAACAGAGCTACAAGGCTTTAGAAATTGGAGTCAAAGCATAC 594 |||||||| ||| |||| || | ||| ||||||||| |||||||||||||||| ||||| Sbjct 744 TTCACTAACGTGAGCGACGAGCTTAGCCACAAGGCTTCAGAAATTGGAGTCAAAACATAC 803 Query 595 TCGTGGCTCGATTTTCTCCATATGGGACAAGAGAAGCCGAAAGAGACAAACCCGCCTAAA 654 || ||| ||||||||||||||||||||| ||||| ||| |||| || ||||||||||| Sbjct 804 TCCTGGATCGATTTTCTCCATATGGGACGTGAGAAACCGGAAGACACGAACCCGCCTAAG 863 Query 655 CCGTCTGACGTGTGCACCATAATGTACACGAGCGGCACAAGCGGTGAACCTAAAGGTGTG 714 ||| | || | ||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 864 GCGTTTAACATATGCACCATAATGTACACCAGCGGCACAAGCGGTGATCCTAAAGGTGTG 923 Query 715 CTTTTGACCCACGAAGCGGCCGCGACTTGCGTCATTGGGGTGGATCTCTGCT-TGGACCA 773 ||||||| ||| |||||| |||||||| || ||||| ||||||||| | ||||||| Sbjct 924 GTTTTGACTCACCAAGCGGTCGCGACTTTTGTTGTTGGGATGGATCTCTA-TATGGACCA 982 Query 774 GTTCGAGGACAAGATGACACATGAAGATGTGTATCTCTCGTTTCT-GCCGTTGGCTCATA 832 ||| || || |||||||||||||| |||||||||||||| || || ||| |||||||||| Sbjct 983 GTTTGAAGATAAGATGACACATGATGATGTGTATCTCTCCTT-CTTGCCCTTGGCTCATA 1041 Query 833 TCCTCGACCGTGCAAATGAGGAATATTTCTTCCGTAAAGGCGCTTCCGTTGGCTATTACC 892 | || |||||| || |||||||| ||||| || |||||||||||||| |||||||||| Sbjct 1042 TTCTTGACCGTATGAACGAGGAATACTTCTTTCGCAAAGGCGCTTCCGTCGGCTATTACC 1101 Query 893 ATGGAGATTTGAATGCGTTACACGATGATATTCAAGAACTGAAACCGACTTTTCTTGCGG 952 ||||| ||||||| | ||||| || ||||||||||||||||||||||||| ||| || | Sbjct 1102 ATGGAAATTTGAACGTGTTACGTGACGATATTCAAGAACTGAAACCGACTTATCTAGCTG 1161 Query 953 GAGTTCCAAGAGTCTTCGAGAGGATTTATGATGGGATTCAGAAAG-CTCTTCAGGAGCTT 1011 |||| |||||||| || ||||| || |||| |||||||| |||| ||||||| || ||| Sbjct 1162 GAGTACCAAGAGTGTTTGAGAGAATCCATGAGGGGATTCA-AAAGGCTCTTCAAGAACTT 1220 Query 1012 AACCCAAGAAGAAGACTCATCTTCTATGCTCTCTATAAATACAAACTTGCGTGGATGAAT 1071 ||||||||||| ||| |||||||| |||||||||| ||| |||| ||||||||| ||||| Sbjct 1221 AACCCAAGAAGGAGATTCATCTTCAATGCTCTCTACAAACACAAGCTTGCGTGGTTGAAT 1280 Query 1072 CGTGGATATTCTCACAGCAAAGCTTCACCCATGGCTGACTTCATAGCTTTCAAAAAGATT 1131 ||||| || ||||| || |||||||||||||||||||| ||||| ||||||| ||||||| Sbjct 1281 CGTGGGTACTCTCATAGTAAAGCTTCACCCATGGCTGATTTCATTGCTTTCAGAAAGATT 1340 Query 1132 AAAAACCAATTAGGAGGTAGAATTCGGTTGCTAGTATCTGGAGGAGCACCACTGAGTCTT 1191 | | || |||| |||||| | || |||||||||||||||||||||||||| |||| | | Sbjct 1341 AGAGACAAATTGGGAGGTCGCATCCGGTTGCTAGTATCTGGAGGAGCACCTTTGAGCCCT 1400 Query 1192 GAGATCGAAGAGTTCTTGAGAGTTACTTCTTGTTGCTTCGTCGTTCAAGGCTATGGTCTA 1251 ||||| |||||||| ||||||||||||| ||||||||| |||||||||||||| |||||| Sbjct 1401 GAGATTGAAGAGTTTTTGAGAGTTACTTGTTGTTGCTTTGTCGTTCAAGGCTACGGTCTA 1460 Query 1252 ACGGAGACGCTTGGAGGAACAACTTTGGGTTACCCGGACGAGATGTGTATGCTCGGGACG 1311 |||||||| ||||||||||| ||||||||| ||||||||||||||||||||| ||||| Sbjct 1461 ACGGAGACACTTGGAGGAACGGCTTTGGGTTTCCCGGACGAGATGTGTATGCTAGGGACA 1520 Query 1312 GTCGGTGTTCCAGCGGTTTACAATGAGATACGGCTTGAGGAGGT-TCCGGAAATGGAG-T 1369 |||||| |||||||||||||||| |||||||||||||| ||||| || | |||||| | | Sbjct 1521 GTCGGTATTCCAGCGGTTTACAACGAGATACGGCTTGAAGAGGTGTCTG-AAATGG-GCT 1578 Query 1370 ATGACCCATTGGGAGAAAATCCGGCAGGGGAGATCTGTATAAGAGGA-ATATGTCTGTTT 1428 ||||||| | ||||||||||||||||| |||||||||||||||||| | |||| ||||| Sbjct 1579 ATGACCCGCTCGGAGAAAATCCGGCAGGAGAGATCTGTATAAGAGGACA-ATGTATGTTT 1637 Query 1429 TCTGGGTATTACAAGAACCCTGAACTCACTGAAGAAGTCATGAAAGACGGATGGTTCCAT 1488 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1638 TCAGGGTATTACAAGAACCCTGAACTCACTGAAGAAGTCATGAAAGATGGATGGTTCCAC 1697 Query 1489 ACAGGAGACATAGGTGAGATTCTTCCAAACGGATTACTTAAGATCATCGATCGTAAGAAG 1548 |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||| Sbjct 1698 ACAGGAGATATAGGTGAGATTCTTCCAAACGGAGTACTCAAGATCATCGATCGTAAAAAG 1757 Query 1549 AACCTGATCAAACTCTCTCAAGGAGAATATGTTGCTCTTGAACATTTGGAAAGCATCTAC 1608 || ||||||||||| ||||||||||||||||||||||| || |||||||||| ||||| | Sbjct 1758 AATCTGATCAAACTTTCTCAAGGAGAATATGTTGCTCTCGAGCATTTGGAAAACATCTTC 1817 Query 1609 GGACAAAACCCTATTGTCCAAGATATATGGGTTTATGGAGACAGCTTCAAATCTATGCTT 1668 || |||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1818 GGGCAAAACTCTGTTGTCCAAGATATATGGGTTTATGGAGACAGCTTCAAATCTATGCTT 1877 Query 1669 GTGGCGGTGATTGTTCCCAATCCAGAAACCCTAAACCGGTGGGCTAAAGATCTCGGTTTT 1728 || |||||| |||||||||| ||||||||| | ||| ||||||||||||||||||||||| Sbjct 1878 GTCGCGGTGGTTGTTCCCAACCCAGAAACCGTCAACAGGTGGGCTAAAGATCTCGGTTTT 1937 Query 1729 ACTAAACCACTCGAAGAACTCTGTTCTTTCCCGGAGCTTAAAGAACACATCATTTCAGAA 1788 ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 1938 ACTAAACCATTCGAAGAACTCTGTTCTTTCCCGGAACTAAAAGAACACATCATTTCAGAA 1997 Query 1789 CTGAAGTCCACGGCAGAGAAGAGCAAGCTAAGCAGGTTTGAGTACATAAAAGCTGTGACG 1848 ||||||||||||||||| |||| ||||||||| | |||||||||||| ||||| ||||| Sbjct 1998 CTGAAGTCCACGGCAGAAAAGAACAAGCTAAGAAAGTTTGAGTACATCAAAGCGGTGACA 2057 Query 1849 GTGGAGACAAAACCTTTTGATGTAGAGAGAGACTTGGTGACTGCGAC-CTTGAAAAATAG 1907 ||||||||||||||||| || |||||||||||||| ||||||||||| || || ||| | Sbjct 2058 GTGGAGACAAAACCTTTCGACGTAGAGAGAGACTTAGTGACTGCGACGCTC-AAGAATCG 2116 Query 1908 GAGGACCAATCTTCTCAAGTATTATCAGGTATCAA-TCGACGAAATGTACCGAAAATTGG 1966 ||||| |||||||||||| ||||||||||| ||| |||||||||||||||| ||||||| Sbjct 2117 GAGGAACAATCTTCTCAAATATTATCAGGTG-CAAATCGACGAAATGTACCGCAAATTGG 2175 Query 1967 CGGCAAAGAGAAGCTGA 1983 | |||||| || |||| Sbjct 2176 CCTCAAAGAAAATCTGA 2192 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98242466565 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5