BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg322639
Length=1287
Score E
Sequences producing significant alignments: (Bits) Value
AT2G03360.2 | Symbols: | Glycosyltransferase family 61 protein... 839 0.0
AT2G03370.1 | Symbols: | Glycosyltransferase family 61 protein... 815 0.0
> AT2G03360.2 | Symbols: | Glycosyltransferase family 61 protein
| chr2:1022287-1024391 REVERSE LENGTH=1486
Length=1486
Score = 839 bits (454), Expect = 0.0
Identities = 673/774 (87%), Gaps = 33/774 (4%)
Strand=Plus/Plus
Query 1 ATGGTTAGGAAAACGACGTCGAAGAGATATTCGGTGGCGTTGGTGATCGTTATGGTTATA 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 119 ATGGTTAGGAAAACGACGTCGAAGAGTTATTCGGTGGCGTTGGTGATCGTTATGGTTATA 178
Query 61 TATGTTGCTTTCTCCTCCGTCTTCGATCGTCAATTGTTTC-TATCGTTAAGTTTCTCTCA 119
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 179 TATGTTGCTTTCTCCTCCGTCTTCGATCGTCAATTGTTTCGT-TCGTTAAGTTTCTCTCA 237
Query 120 AG--------GTA----CGTTACAACAAACATGGGAATCCAGAAGAATCAA-GCAA--CC 164
|| ||| |||||||||||| ||||||||| ||||||| ||| |||| ||
Sbjct 238 AGTTTCCTCTGTAGGTACGTTACAACAAAGATGGGAATCAAGAAGAA-CAAAGCAAAACC 296
Query 165 CACACAACCACAAGAGACTACTTCGGCAACAATCACATGTGACCGATCCCACAGT-GATT 223
|| | || | | | || | || |||| ||||||||||||||||||||||| | | ||
Sbjct 297 CA-A-AAGTG-ATG-G-CTGCATCAGCAAAAATCACATGTGACCGATCCCACACTAG-TT 350
Query 224 ACGATCTCTGCTCAATCAACGGCTCATGTATTCTCGACCCCAAAACCGGTACTTTTACTC 283
||||||| ||||| ||||||||||||||||||||| |||| |||||||| ||| | ||||
Sbjct 351 ACGATCTTTGCTCCATCAACGGCTCATGTATTCTCAACCCTAAAACCGGAACTCTAACTC 410
Query 284 TCATGGACCCAACATTTGCAACTTCA-C-----TTGTTGAGAAAATCAGGCCATACCCAA 337
| ||||||| |||| || | || ||| | |||| ||||||||||||||||||||||
Sbjct 411 TTATGGACCGAACACTTACCACATCAGCACCACTTGTCGAGAAAATCAGGCCATACCCAA 470
Query 338 GAAAAGCTGAAAACTGGACCATGCCTAGGATCAAAGAGCTAACATTAAGCT-CAGGCCCA 396
||||| | |||||||||| |||||||||||||| |||||||| | ||| || ||||||||
Sbjct 471 GAAAATCAGAAAACTGGATCATGCCTAGGATCAGAGAGCTAAAACTAA-CTTCAGGCCCA 529
Query 397 TTGGGCTTGACCCGATCATGTGACATAACACATGATTCGCCAGCGATTGTGTTCAGTGCC 456
| || | |||| ||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct 530 TCGGACCTGACACGATCATGTGATATAACACATGATTCGCCGGCCATTGTGTTCAGTGCT 589
Query 457 GGAGGTTACACCGGAAGCATTTATCATGATTTCATGGACGGTTTCATTCCTCTTTTCATC 516
||||||||||||||||| |||||||| ||||| || || |||||||| || ||||| |||
Sbjct 590 GGAGGTTACACCGGAAGTATTTATCACGATTTTATCGATGGTTTCATCCCACTTTTTATC 649
Query 517 ACCGCCAACTCCGTATACCCGGATCGCGATTTCATCCTCGTGGTAGTGAATTCTAAGGAG 576
|| |||||||| ||||||||||| |||||||||||||||||||| |||||| |||||||
Sbjct 650 ACGGCCAACTCGGTATACCCGGACCGCGATTTCATCCTCGTGGTTGTGAATCCTAAGGAA 709
Query 577 TGGTGGATGCCGAAATACATCGATATTCTAGGTGCGTTTAGCAAACACAAAACCATACTA 636
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 710 TGGTGGATGCCAAAATACATCGATATTCTAGGTACGTTTAGCAAACACAAAACCATATTA 769
Query 637 CTTGACAAAGAAAATGCTTCTTTTACACATTGCTTCCCTTCAGTCACTGTGGGTCTAGTT 696
|| |||||||||||||||||| |||||||||||||| |||||| ||||||||| ||| ||
Sbjct 770 CTAGACAAAGAAAATGCTTCTATTACACATTGCTTCACTTCAGCCACTGTGGGCCTAATT 829
Query 697 TCACATGGGCCTAAAATAATAGATCCAACCCAAATACCCAATTCCAAATCATTA 750
||||||||||||| | |||||| ||||||||||||||||| ||||||||||||
Sbjct 830 TCACATGGGCCTATGACAATAGACCCAACCCAAATACCCAACTCCAAATCATTA 883
Score = 726 bits (393), Expect = 0.0
Identities = 489/537 (91%), Gaps = 0/537 (0%)
Strand=Plus/Plus
Query 751 CCTCGTCTCATATTGGTTAGTAGATATGGGAACATTGGTCGGGTGATACTAAACGAGAAA 810
||||||||||||||||| |||||||||| ||||||||||| |||||| |||||||| ||
Sbjct 950 CCTCGTCTCATATTGGTCCGTAGATATGGTAACATTGGTCGAGTGATATTAAACGAGGAA 1009
Query 811 GAGATCAAAGAGATGCTTGAAGATGTTGGATTCGAGGTAATCACATTTAGATCATCGAAA 870
||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 1010 GAGATCAGAGAGATGCTTGAAGATGTTGGATTCGAGGTAATCACATTTAGACCATCAAAA 1069
Query 871 ACGACGAGTGTAAGAGAAGCGTACAAACTTATAAAGTCGAGCCACGTGATGGTTGGGGTT 930
|| |||||| | ||||||||||| |||||||||||||| ||||||| |||| | ||||||
Sbjct 1070 ACAACGAGTTTGAGAGAAGCGTATAAACTTATAAAGTCAAGCCACGGGATGATCGGGGTT 1129
Query 931 CATGGTGCGGCACTAACCCATTTGTTGTTTCTTCGACCCGGTTCAATGTTGGTTCAAGTT 990
|||||||| ||| ||||||| ||||||||||||||||| |||||| ||||||||||| ||
Sbjct 1130 CATGGTGCAGCATTAACCCAGTTGTTGTTTCTTCGACCAGGTTCAGTGTTGGTTCAAATT 1189
Query 991 GTTCCGCTTGGGCTAGGTTGGGCGTCAAAAACGTGTTACGAATCGCCAGCTAAGGCAATG 1050
|||||| |||| |||||||||| ||| |||||||||| |||| |||| ||||| ||||||
Sbjct 1190 GTTCCGGTTGGACTAGGTTGGGTGTCTAAAACGTGTTTCGAAACGCCGGCTAAAGCAATG 1249
Query 1051 AAGTTGGAGTATATTGAGTATCGGGTGAATGTGGAAGAGAGCAGTTTGATAGAGAAGTAT 1110
|||||||| |||| |||||||| || ||||||||||| |||||||||||||||||||||
Sbjct 1250 AAGTTGGATTATACGGAGTATCGAGTAAATGTGGAAGAAAGCAGTTTGATAGAGAAGTAT 1309
Query 1111 AACAGAGATGATTTGGTTTTGAAAGATCCGATTGCTTATAGAGGAATGGATTGGAATGTG 1170
| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1310 AGTAGAGATGATTTGGTTTTGAAAGATCCTATTGCTTATAGAGGAATGGATTGGAATGTG 1369
Query 1171 ACTAAAATGAAAGTTTATTTAAAAGAACAAGATGTTAGATTAGACGTGAATCGGTTTAGG 1230
|||||||||||||| ||||||||||| |||||||| || ||||| |||||||||||||||
Sbjct 1370 ACTAAAATGAAAGTCTATTTAAAAGATCAAGATGTGAGGTTAGATGTGAATCGGTTTAGG 1429
Query 1231 AAACATATGAATGAAGCATACGAGAAAGCTAAATTGTTTATGGACTTAAACGGTTGA 1287
||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||
Sbjct 1430 AAACATATGAATGAAGCATACAAGAAAGCTAAGTCGTTTATGGACTTAAACGGTTGA 1486
> AT2G03370.1 | Symbols: | Glycosyltransferase family 61 protein
| chr2:1024710-1027045 REVERSE LENGTH=1439
Length=1439
Score = 815 bits (441), Expect = 0.0
Identities = 661/765 (86%), Gaps = 24/765 (3%)
Strand=Plus/Plus
Query 1 ATGGTTAGGAAAACGACGTCGAAGAGATATTCGGTGGC-GTTG--GTGATCGTTATGGTT 57
|||||||||||| || ||||||||| ||||||||||| | | | | | || || |||
Sbjct 77 ATGGTTAGGAAACCGTCGTCGAAGATTTATTCGGTGGCAGCAGCTGCGTTGGTGATCGTT 136
Query 58 ATATATGTTGCTTTCTCCTCCGTCTTCGATCGTCAATTGTTTCTATCGTTAAGTTTCTCT 117
|||||||||| ||||| |||||| || |||||||||||||| | ||||| |||||| | |
Sbjct 137 ATATATGTTGTTTTCTGCTCCGTGTTTGATCGTCAATTGTTACAATCGTCAAGTTTATAT 196
Query 118 CAAGGTACGTTACAACAAACATGGGAATCCAGAAGAATCAAGCAA--CCCAC-ACAACCA 174
|||||||||||||||||| |||||||||| ||||||||||||||| ||||| ||||||
Sbjct 197 CAAGGTACGTTACAACAACCATGGGAATCTAGAAGAATCAAGCAAGCCCCACAACAACCG 256
Query 175 CAAGAGACTACTTCGGCAACAATCACATGTGACCGATCCCACAGTGATTACGATCTCTGC 234
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 257 CAAGAGACTACTTCGGCAACAATCACATGTGACCGATCCCACACTAATTACGATCTCTGC 316
Query 235 TCAATCAACGGCTCATGTATTCTCGACCCCAAAACCGGTACTTTTACTCTCATGGACCCA 294
||||||||||||||||||| ||| |||| |||||||| ||||| ||||| |||||||||
Sbjct 317 TCAATCAACGGCTCATGTAATCTGGACCTTAAAACCGGAACTTTGACTCTAATGGACCCA 376
Query 295 ACATTTGCAACTTCACTTGTTGAGAAA-ATCAGGCCATACCCAAGAAAAG-CTGAAAACT 352
|||| ||| | ||||||| || ||| |||||||||||||||| ||||| |||| ||||
Sbjct 377 ACATCAGCA-C--CACTTGTCGA-AAAGATCAGGCCATACCCAA-AAAAGGCTGACAACT 431
Query 353 GGACCATGCCTAGGATCAAAGAGCTAACATTAAGCTCAGGCCCATTGGG-CTTGACCCGA 411
||| |||||||||||||| |||||||||| ||| ||||||||||||||| || | |||||
Sbjct 432 GGATCATGCCTAGGATCAGAGAGCTAACACTAACCTCAGGCCCATTGGGTCT-GCCCCGA 490
Query 412 TCATGTGACATAACACATGATTCGCCAGCGATTGTGTTCAGTGCCGGAGGTTACACCGGA 471
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 491 TCATGTGACATAACACATGATTTGCCGGCGATTGTGTTCAGTGCCGGAGGTTACACCGGA 550
Query 472 AGCATTTATCATGATTTCATGGACGGTTTCATTCCTCTTTTCATCACCGCCAACTCCGTA 531
||||| ||||| ||||| ||||| ||||| || || ||||||||||| ||||| || |||
Sbjct 551 AGCATCTATCACGATTTAATGGATGGTTTTATCCCGCTTTTCATCACGGCCAATTCGGTA 610
Query 532 TACCCGGATCGCGATTTCATCCTCG-TGGTAGTGAATTCTAAGGAGTGGTGGATGCCGAA 590
|| ||||| || |||||||||| || ||||||| ||| | ||||| ||||||||||| ||
Sbjct 611 TATCCGGACCGTGATTTCATCC-CGGTGGTAGTAAATGCAAAGGAATGGTGGATGCCAAA 669
Query 591 ATACATCGATATTCTAGGTGCGTTTAGCAAACACAAAACCATACTACT--T-GACAAAGA 647
||||||||||||||||||| ||||||||||||| ||| ||||| |||| | ||||||||
Sbjct 670 ATACATCGATATTCTAGGTACGTTTAGCAAACATAAACCCATATTACTACTAGACAAAGA 729
Query 648 AAATGCTT-CTTTTACACATTGCTTCCCTTCAG-TCACTGTGGGTCTAGTTTCACATGGG 705
|| || || || ||||||||||||| |||||| | | |||||| ||| || ||||| ||
Sbjct 730 AAGTG-TTGCTACTACACATTGCTTCACTTCAGCT-ATTGTGGGCCTAATTACACATTGG 787
Query 706 CCTAAAATAATAGATCCAACCCAAATACCCAATTCCAAATCATTA 750
|| | | |||||| ||||||||||||||||| ||||||||||||
Sbjct 788 CCCATGACAATAGACCCAACCCAAATACCCAACTCCAAATCATTA 832
Score = 732 bits (396), Expect = 0.0
Identities = 492/539 (91%), Gaps = 4/539 (1%)
Strand=Plus/Plus
Query 751 CCTCGTCTCATATTGGTTAGTAGATATGGGAACATTGGTCGGGTGATACTAAACGAGAAA 810
||||||||||| ||||||||| ||||||| ||||||||||| |||||| |||||||| ||
Sbjct 899 CCTCGTCTCATGTTGGTTAGTCGATATGGTAACATTGGTCGAGTGATATTAAACGAGCAA 958
Query 811 GAGATCAAAGAGATGCTTGAAGATGTTGGATTCGAGGTAATCACATTTAGATCATCGAAA 870
|||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||
Sbjct 959 GAGATCAAAGAGATGCTTGAAGATGTCGGGTTCGAGGTAATCATATTTAGACCATCGAAA 1018
Query 871 ACGACGAGTGT-AAGAGAAGCGTACAAACTTATAAAGTCGAGCCACGTG-ATGGTTGGGG 928
||||||| | | || |||||| || |||||||| ||||| ||||||| | ||||| || |
Sbjct 1019 ACGACGAATTTGAA-AGAAGCATATAAACTTATCAAGTCTAGCCACG-GAATGGTCGGTG 1076
Query 929 TTCATGGTGCGGCACTAACCCATTTGTTGTTTCTTCGACCCGGTTCAATGTTGGTTCAAG 988
| |||||||||||| |||| || |||||||||||||||||||||||||| || |||||||
Sbjct 1077 TACATGGTGCGGCATTAACACACTTGTTGTTTCTTCGACCCGGTTCAATATTTGTTCAAG 1136
Query 989 TTGTTCCGCTTGGGCTAGGTTGGGCGTCAAAAACGTGTTACGAATCGCCAGCTAAGGCAA 1048
|||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||
Sbjct 1137 TTGTTCCGCTTGGGCTAGGTTGGGCGTCTAAACCGTGTTACGAATCGCCAGCTAAGACAA 1196
Query 1049 TGAAGTTGGAGTATATTGAGTATCGGGTGAATGTGGAAGAGAGCAGTTTGATAGAGAAGT 1108
|||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||
Sbjct 1197 TGAAGTTGGAGTATCTGGAGTATAAGGTGAATGTGGAAGAGAGCAGTTTGATAGAGAAGT 1256
Query 1109 ATAACAGAGATGATTTGGTTTTGAAAGATCCGATTGCTTATAGAGGAATGGATTGGAATG 1168
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1257 ATAACAGAGATGATTTGGTTTTGAAAGATCCTATTGCTTATAGAGGAATGGATTGGAATG 1316
Query 1169 TGACTAAAATGAAAGTTTATTTAAAAGAACAAGATGTTAGATTAGACGTGAATCGGTTTA 1228
||||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||
Sbjct 1317 CGACTAAAATGAAAGTATATTTAAAAGAACAAGATGTGAGTTTAGATGTGAATCGGTTTA 1376
Query 1229 GGAAACATATGAATGAAGCATACGAGAAAGCTAAATTGTTTATGGACTTAAACGGTTGA 1287
| |||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||
Sbjct 1377 GAAAACATATGAATGAAGCATATAAGAAAGCTAAAATATTTATGGACATAAACGGTTGA 1435
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63302887245
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5