BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg322734

Length=471
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G25930.1 | Symbols:  | Adenine nucleotide alpha hydrolases-l...   671    0.0  


> AT3G25930.1 | Symbols:  | Adenine nucleotide alpha hydrolases-like 
superfamily protein | chr3:9492845-9493953 REVERSE LENGTH=734
Length=734

 Score =  671 bits (363),  Expect = 0.0
 Identities = 436/471 (93%), Gaps = 6/471 (1%)
 Strand=Plus/Plus

Query  1    ATGAAGAATGTTATGGTGATTATTGACGAGAGTAATTCAAGTTATGATTTACTCATTTGG  60
            ||||||||||||||| |||||||||||||||| ||  |||||||||||||||||||||||
Sbjct  83   ATGAAGAATGTTATGCTGATTATTGACGAGAGCAACGCAAGTTATGATTTACTCATTTGG  142

Query  61   GCCCTTGAAAACCAGAAAGATACCATTGAGAGCTCCAAAGTTTTTCTCTTTGCAACACAG  120
            || ||||||||||| |||||||||||||||||||||||||||| | ||||||||| ||||
Sbjct  143  GCACTTGAAAACCAAAAAGATACCATTGAGAGCTCCAAAGTTTATATCTTTGCAAAACAG  202

Query  121  CCACAAAATTCCTTCACTCCTCCTACCGTACTTTCTTCATCAGTCGGTTTTGCTCAAATT  180
            |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  203  CCACAAAATTCCTTTACTCCTCCTACCGTACTTTCTTCATCAGTCGGCTTTGCTCAAATT  262

Query  181  TTCTATCCATTTTCACCTAATTCAGAACTCATAAGATTGGCTCAAGAAAAGAATATGAAA  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  263  TTCTATCCATTTTCACCTAATTCAGAACTCATAAGATTGGCTCAAGAAAAGAATATGAAA  322

Query  241  ATTGCTTTGGGTATATTAGAGAAAGCCAAGGAGATATGTTTAAATCATGGGATTAAAGCA  300
            |||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||
Sbjct  323  ATTGCTTTGGGTATATTAGAGAAAGCCAAGAAGATATGTTTAAATCATGGGATCAAGGCA  382

Query  301  GAGACGTTTACAGATGTTGGAGATCCTAAAGATCTAATCCGCAAGATAATTCAAGATCAA  360
            ||||| ||||| |||| |||||| |||||||||||||||||||||||||||||||| | |
Sbjct  383  GAGACATTTACTGATGATGGAGACCCTAAAGATCTAATCCGCAAGATAATTCAAGAACGA  442

Query  361  AATATCCATTTAATAGTTACGAACGATCAACAAACTCAAAATCTCAAAAAGTGTACACGT  420
            |||||| ||||||||||||||| ||||||||||| ||    ||  |||||||||||||  
Sbjct  443  AATATCAATTTAATAGTTACGAGCGATCAACAAAGTC----TC--AAAAAGTGTACACAA  496

Query  421  AATACAGATTGTTCTCTTCTTGTCGTGACGAAAACACTAAGCAAAGATTAA  471
            |||||||||||||||||||||||||||| ||||| |||  |||||||||||
Sbjct  497  AATACAGATTGTTCTCTTCTTGTCGTGAAGAAAAGACTTCGCAAAGATTAA  547



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 22404429562


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5