BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg322753 Length=1812 Score E Sequences producing significant alignments: (Bits) Value AT3G26120.1 | Symbols: TEL1 | terminal EAR1-like 1 | chr3:95463... 2577 0.0 > AT3G26120.1 | Symbols: TEL1 | terminal EAR1-like 1 | chr3:9546398-9549453 FORWARD LENGTH=2056 Length=2056 Score = 2577 bits (1395), Expect = 0.0 Identities = 1711/1856 (92%), Gaps = 52/1856 (3%) Strand=Plus/Plus Query 1 ATGGAAGATTCTAGACTTTTTCCGTTCGCCGGAAACTTAGACCCTCGTGCTCAAGAGTTT 60 |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1 ATGGAAGACTCCAGACTTTTTCCGTTCGTCGGAAACTTAGACCCTCGTGCTCAAGAGTTT 60 Query 61 ATACCACTT-AACCCTACCTCCTCCGGTTTTTACTTCCCGTTCACTCCTCCT--T-CACC 116 |||||| || ||||||| ||||||||||||| |||| |||| |||||||||| | ||| Sbjct 61 ATACCA-TTCAACCCTATCTCCTCCGGTTTTCACTTTCCGTACACTCCTCCTCCTCCACA 119 Query 117 GCTTCCTCCGCCGTTA----CATC--CGT-C-G------T----CGGAGCCAAGAGTTTT 158 ||||||||| |||||| | || ||| | | | |||||||||||||||| Sbjct 120 GCTTCCTCCTCCGTTACCTCCGTCGTCGTACGGATTATCTCCGACGGAGCCAAGAGTTTT 179 Query 159 CACATTCTTCAACATCCCACCACATCCGGTGATGTTTTCTCCTCCTCCTTCTCAACCACC 218 |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 180 CACATTCTTCAATATCCCACCACATCCGATGATGTTTTCTCCTCCTCCTCCTCAACCACC 239 Query 219 ACCATCACCACCACCGCGTCCGTGTTTTAACGGCGTTTCGGCAGCTCAACGACTTCCTCC 278 | | |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct 240 A-C--CACCACCACCGCGTCCATGTTTCAACGGCGTTTCGGCAGCTCAACGGCTTCCTCT 296 Query 279 GCCGTCAAATTCTCCGACGCGATCTCTCTCATTGATCTCCGTACCGCGTGACGTCACCGA 338 |||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct 297 GCCGTCAAATACTCCGACGCGATCTCTCTCTTTGATCTCCGTACCACGTGACGTAACCGA 356 Query 339 GTCTACAGTGAGACGTGACTTGGAGGTTTACGGCGACGTTCGTGGCGTGCAAATGGAGAG 398 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 GTCTACGGTGAGACGTGACTTGGAGGTTTACGGCGACGTTCGTGGCGTGCAAATGGAGAG 416 Query 399 AATCTCTGAAGGAATCGTGACCGTCCATTTCTACGATATCCGTGACGCTAAAAGAGCGGT 458 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 417 AATCTCTGAAGGAATCGTGACCGTCCATTTCTACGATATACGTGACGCTAAAAGAGCGGT 476 Query 459 TCGAGAAGTTTGTGGTAGACACATGCAGCAACAAGCCAGAGGTGGAAGCGTTTGGAGCTC 518 || |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 477 ACGTGAAGTTTGTGGTAGACACATGCAGCAACAAGCTAGAGGTGGAAGCGTCTGGAGCTC 536 Query 519 ACCTTCTACTTCATCGGCGCGTGGGTTTGTTTCCGGTAGACCTGTGTGGGCTCAGTTCGT 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 537 ACCTTCTACTTCATCGGCGCGTGGGTTTGTTTCCGGTAGACCTGTGTGGGCTCAGTTCGT 596 Query 579 AGTTCCGGCCACTAGCGCCGTTCCCGGAGGTTGTAACCAGGGAACGTTAGTTATATTTAA 638 ||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 597 AGTTCCGGCGACTAGTGCCGTTCCCGGAGGTTGTAACCAAGGAACGTTAGTAATATTTAA 656 Query 639 CTTAGACCCTGAAGTCTCTTCCATTACTCTCAGACAGTTTTTCCAAGTTTACGGTCCGAT 698 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 657 CTTAGACCCTGAGGTCTCTTCCATTACTCTCAGACAGATTTTCCAAGTTTACGGTCCGAT 716 Query 699 CAAAGAGTTGAGAGAGACACCGTACAAGAAACATCAAAGGTTCATTGAGTTTTATGATGT 758 ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct 717 CAAAGAGTTGAGAGAGACACCGTACAAAAAACATCAAAGGTTCGTTGAGTTTTATGATGT 776 Query 759 AAGAGATGCGGCGAGAGCGTTTGATCGAATGAATGGTGAAGAGATCGGTGGGAAGCAAGT 818 ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 777 GAGAGACGCGGCGAGAGCGTTTGATCGAATGAATGGTAAAGAGATTGGTGGGAAGCAAGT 836 Query 819 TGTGATCGAATTTAGTCGACCTGGTGGAATTAAGAACAAGTTCAGGTCATCTAGGCAACC 878 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 837 TGTGATCGAATTTAGTCGACCTGGTGGAATTAAGAACAGGTTCAGGTCATCTAGGCAACC 896 Query 879 GCAGCTACCGTTTCAACCGCTTCAACAGCCACCAATTCTATTTCCTCCTTTGAGGCGGCC 938 ||||||||| ||||||||||||| | |||||||||| ||| ||||||||||||||||||| Sbjct 897 GCAGCTACCATTTCAACCGCTTCGAGAGCCACCAATCCTAATTCCTCCTTTGAGGCGGCC 956 Query 939 AGTAACTCTCATGAAAGATAAAAACAAGAATGTGAGCCCTAAAAATGGAATTATTGCTGT 998 |||| || |||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 957 AGTATCTTTCATCAAAGATAAAAACAAGAATGTGAGCCCTAAAAATGGAGTTATTGCTGT 1016 Query 999 TGGTGCTTCTATGCGTTCGTTATGTATCATTGGTGATGACGATAATAAGAC-C------C 1051 || ||||||||||||||| ||||||||||| | || ||||||||||||||| | | Sbjct 1017 TGATGCTTCTATGCGTTCCTTATGTATCATCGATGCTGACGATAATAAGACTCGAGGAAC 1076 Query 1052 --GAGGAACGGAATCCGAATGTGCGGAGACAAAGAGCAAGAATGTGGCTAAGTGGGGGAA 1109 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1077 CCGAGGAACGGAATCCGAATGCGCGGAGACAAAAAGCAAGAATGTGGCTAAGTGGGGGAA 1136 Query 1110 GAAAAGACAGATGAAGAACATGGAACTAAGTCAGTTTCTTATCAGTGAAGAAACCATGGA 1169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1137 GAAAAGACAGATGAAGAACATGGAACTAAGTCAGTTTCTTATCAGTGAAGAAACCATGGA 1196 Query 1170 AGATCCGAGTTGCAGAGATCCACGTACTACTTTGATGATCAAGAACATACCAAACAAGTA 1229 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1197 AGATCCGAGTTGCAGAGATCCACGTACCACTTTGATGATCAAGAACATACCAAACAAGTA 1256 Query 1230 CAGTCAAAAGCTACTCTTGGATATGCTAGACAATCATTGCATTCACATCAACAAAGCAAT 1289 ||||||||||||||| ||||||||| | ||||| |||||||||||||| ||| ||||||| Sbjct 1257 CAGTCAAAAGCTACTGTTGGATATGTTGGACAAGCATTGCATTCACATAAACGAAGCAAT 1316 Query 1290 CACCGAGGAGCACGATGAACATGAGTCTCATCATCAGCCGTATTCTTCTTATGATTTCGT 1349 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1317 CACCGAGGAGCACAATAAACATGAGTCTCATCATCAGCCGTATTCTTCTTATGATTTCGT 1376 Query 1350 GTATCTCCCCATGGATTTCAACAATAAGTGCAATGTTGGTTATGGGTTTGTGAACATGAC 1409 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1377 GTATCTCCCCATGGATTTCAACAACAAGTGCAATGTTGGTTATGGGTTTGTGAACATGAC 1436 Query 1410 ATCTCCGGAAGCAGCTTGGAGGTTTTACAAGGCGTTTCATCATCAACGTTGGGAGGTTTT 1469 ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| Sbjct 1437 ATCTCCGGAAGCAGCTTGGAGGTTTTACAAGGCATTTCATGGTCAGCGTTGGGAGGTTTT 1496 Query 1470 TAATTCGCGTAAGATTTGCCAGATCACATATGCAAGAGTTCAGGGTTTGGAGGATCTAAA 1529 |||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1497 TAATTCGCATAAGATTTGCCAAATCACATATGCGAGAGTTCAGGGTTTGGAGGATCTAAA 1556 Query 1530 GGAACACTTCAAGAGCTCTAAGTTTCCGTACGAGGCTGAGCTATACCTGCCAGTGGTCTT 1589 |||||||||||||||||| || ||||| | ||||||||||||||||||||| |||||||| Sbjct 1557 GGAACACTTCAAGAGCTCGAAATTTCCATGCGAGGCTGAGCTATACCTGCCGGTGGTCTT 1616 Query 1590 CTCGCCTCCACGAGACGGGAAG-AGGTTAACAGAACCTGTCTCCATCAACAT--C-A--A 1643 ||||||||||||||| |||||| || |||||||||||||||||||||||||| | | | Sbjct 1617 CTCGCCTCCACGAGATGGGAAGCAG-TTAACAGAACCTGTCTCCATCAACATAACCATCA 1675 Query 1644 -CGGCTGCACCAGACTTAATCAT---C-TT--GAGCGAATGGACGGTCAAGATCACTCTC 1696 |||||||||||||||||||||| | || |||| || | |||||||||||||| || Sbjct 1676 ACGGCTGCACCAGACTTAATCATAATCATTTTGAGCAAACAGTCGGTCAAGATCACTTTC 1735 Query 1697 TGAGTAGATCATATTGTGATAGTGACCATGATAATAGTCACGAAGATGGATTTTCCGGCA 1756 ||||| |||||| |||||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct 1736 TGAGTGGATCATGTTGTGACAGTGACCATGATAACAGTCATGAAGATGGATTTTCCGGCA 1795 Query 1757 GTAGTAGCATAGACTGTGGCCGGTGTATCACATTGGAAGGAGAAACATCTTTCTAG 1812 |||| | |||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 1796 GTAGC-G--TAGACTGTGGCCGGAGTATCACCGTGGAAGGAGAAACATCTTTCTAG 1848 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89658173370 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5