BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg322779
Length=1215
Score E
Sequences producing significant alignments: (Bits) Value
AT3G26440.1 | Symbols: | Protein of unknown function (DUF707) ... 1807 0.0
AT1G13000.1 | Symbols: | Protein of unknown function (DUF707) ... 728 0.0
AT1G24570.1 | Symbols: | Protein of unknown function (DUF707) ... 267 2e-70
> AT3G26440.1 | Symbols: | Protein of unknown function (DUF707)
| chr3:9676982-9679900 FORWARD LENGTH=1532
Length=1532
Score = 1807 bits (978), Expect = 0.0
Identities = 1140/1215 (94%), Gaps = 24/1215 (2%)
Strand=Plus/Plus
Query 1 ATGGCAAACAGAGCAGACAACTCAATACGTTGTTCAAATAGTAAAAAACCGAATGACGGT 60
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 123 ATGGCAAACAGAGCAGACAACTCAATGCGTTGTTCAAATAGTAAGAAACCGAATGACGGT 182
Query 61 ATGATGCTCGTAATATCAATTTTTGCGGGAATAGTTATCGGATTTTTGTTAGGAATATCT 120
||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 183 ATGATGCTCGTAATATCGATTTTCGCGGGAATAGTTATCGGATTTTTATTAGGCATATCT 242
Query 121 TTTCCTACATTGTCACTAACTAAGATGAATTTTCCATCAAGCATACTTCCTTCTGTTGCT 180
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 243 TTCCCTACATTGTCACTAACTAAGATGAATTTTCCATCAAGCATTCTTCCTTCTGTTGCT 302
Query 181 ACTGTTTACATAGAAAACGAGAAACCGGAGAAATCATCTAAGACGAGTTCACAAAATGAG 240
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 303 ACTGTCTACATAGAAAATGAGAAACCGGAGAAATCATCTAAGACGAGTTCACAAAACGA- 361
Query 241 TTTAGTGATGCAGCACATCATCATAAGGCATGTTTTTGTTTCTCCCTTATTTGGGTTCCA 300
||||||||| ||||||||||| | | | ||||||||||||
Sbjct 362 --AAGTGATGCATCACATCATCAT-A---A-------G----------ATTTGGGTTCCA 398
Query 301 TCGAATCCTCGCGGTGCAGAGATGTTGCCTCCAAGTTTTGTTGCAACCGAATCAGATTTT 360
||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||
Sbjct 399 TCGAATCCTCGAGGTGCAGAGATGTTACCTCCAAGTTTTGTTGCAGCCGAATCGGATTTT 458
Query 361 TACTTACGAAGATTGTGGGGATTGCCTAAAGATGATTTACCAGTGGTGAAACCTAAGTAT 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 459 TACTTACGAAGATTGTGGGGATTGCCTAAAGATGATTTACCAGTGGTGAAGCCTAAGTAT 518
Query 421 CTAGTTGCTTTTACTGTTTCTTATGAACAGCGAAAAAACATTGATGCTTGCATCAAGAAA 480
|| |||||||||||||||||||||||||| |||||||||| |||||||| |||| |||
Sbjct 519 CTTGTTGCTTTTACTGTTTCTTATGAACAAAGAAAAAACATCGATGCTTGTGTCAAAAAA 578
Query 481 TTCTCAGATAACTTCACTATCGTTCTGTTTCATTACGATGGAAAAACCTCGGAATATGAT 540
||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct 579 TTCTCAGATAACTTCACCATTGTTCTGTTTCATTACGATGGAAAAACCTCGGAGTATGAT 638
Query 541 GAATTTGAATGGTCTAAACGGGCGATACACGTGAGTGTACCTAAGCAAACCAAGTGGTGG 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 639 GAATTTGAATGGTCTAAACGGGCGATACACGTCAGTGTACCTAAGCAAACCAAGTGGTGG 698
Query 601 TATGCTAAAAGGTTTCTGCATCCTGATATCATAGCACCGTATGAATATATATTCATTTGG 660
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 699 TATGCTAAAAGGTTTCTGCATCCTGATATCATAGCACCATATGAATATATATTCATTTGG 758
Query 661 GATGAAGATCTTGGTGTTGAAAACTTCGACGCAGAAGAGTACATCGAGATTGTGAAGAAG 720
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 759 GATGAAGATCTTGGCGTTGAAAACTTCGACGCAGAAGAGTACATCAAGATTGTGAATAAG 818
Query 721 CATGGTCTAGAAATATCGCAACCCGCTGTGGAATCAAGAAAATCAATCACATGGAAGATA 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 CATGGTCTAGAAATATCGCAACCCGCTGTGGAATCAAGAAAATCAATCACATGGAAGATA 878
Query 781 ACAAAGAGAATACCCAGAAGCGAAGTTCACAAAGAAGTCGAAGAGAAACCAGGCCGCTGT 840
||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 879 ACAAAGAGAATACCCGGAATCGAAGTTCACAAAGAAGTCGAAGAGAAACCAGGCCGCTGC 938
Query 841 AATGACCCTCACCTACCTCCTTGTGCAGGGTTTATAGAGATTATGGCTCCAGTTTTCTCA 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 AATGACCCTCACCTACCTCCTTGTGCAGGGTTTATAGAGATTATGGCTCCAGTTTTCTCT 998
Query 901 AGAGATTCATGGCGCTGCGTGTGGCATATGATACAGAATGACTTGGTTCACGGTTGGGGT 960
||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 999 AGAGAGGCATGGCGTTGTGTGTGGCATATGATTCAGAATGACTTGGTTCACGGTTGGGGT 1058
Query 961 CTTGACTTTGCGCTAAGAAAATGTGTTGAGCCTGCACATGAGAAGATTGGTATTGTGGAT 1020
||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||
Sbjct 1059 CTTGACTTTGCGCTAAGAAAATGCGTCGAGCCTGCACATGAGAAGATTGGTGTTGTGGAT 1118
Query 1021 TCTCAATGGATCATTCATCAAAAGATTCCTTCTTTAGGAAGCCAGGGAACTGCGCAGGAA 1080
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1119 TCTCAATGGATCATTCATCAAAAGATTCCTTCTTTAGGCAGCCAGGGAACCGCGCAGGAA 1178
Query 1081 GGGAAATCCGCGTTCCAAGGGGTAAGAGAGAGATGTAAACGGGAATGGACAATGTTTCAG 1140
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1179 GGGAAAACCGCGTTCCAAGGGGTAAGAGAGAGATGTAAACGGGAATGGACAATGTTTCAG 1238
Query 1141 AAAAGAATGACGCGATCAGAGCAGAAGTATCTGAAAGAAATTGCATCTGCCTCTTCAAAC 1200
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1239 AAAAGAATGACCCGATCAGAGCAGAAGTATCTGAAAGAAATTGCATCTGCCTCTTCAAAC 1298
Query 1201 GCTACACTTACTTAA 1215
|||||| |||||||
Sbjct 1299 TCTACACGTACTTAA 1313
> AT1G13000.1 | Symbols: | Protein of unknown function (DUF707)
| chr1:4436105-4439464 REVERSE LENGTH=1901
Length=1901
Score = 728 bits (394), Expect = 0.0
Identities = 956/1220 (78%), Gaps = 67/1220 (5%)
Strand=Plus/Plus
Query 1 ATGGCAAACAGAGCAGACAACTC-AATACGTTGTTCAAATAGTAAAAAACCGAATGACGG 59
||||| ||| || |||||||||| ||| || ||||| ||| ||||||| || ||||| ||
Sbjct 399 ATGGCTAACCGAACAGACAACTCGAAT-CGCTGTTCGAATGGTAAAAAGCCAAATGATGG 457
Query 60 TATGATG-CTCGTAATATCAATTTTTGCGGGAATAGTTATCGGATTT-TTGTTAGGAATA 117
|||| | ||| | ||| | | || | ||||||||| |||| ||| || || || |||
Sbjct 458 AATGA-GACTCATTATAGCGACATTCGTAGGAATAGTTGTCGG-TTTCTTCTTGGGGATA 515
Query 118 TCTTTTCCTACATTGTCACTAACTAAGA-TGAATTTTCCATCAAGCATACTTCCTTCTGT 176
||||| |||||| | |||||||| || | | |||||||| || |||| ||||| |||||
Sbjct 516 TCTTTCCCTACACTATCACTAAC-AAAACTAAATTTTCCCTCTGGCATTCTTCCCTCTGT 574
Query 177 TGCTACTGTTTACATAGAAAACGAGAAACCGGAGAA-ATC-ATCT-AAGACGAGTTCACA 233
|| || | |||| ||||| | |||| ||| || || ||| | | || ||| || ||
Sbjct 575 TGATATTACTTACGTAGAAGATGAGACACCAGA-AACATCGA-GTGAA-ACGCTTTTGCA 631
Query 234 -AAATGAGT--T-TAGTGATGCAG-CACAT-CATCATAAGGCATGTTTTTGTTTCTCC-C 286
| ||| || | ||| | | | | |||| | ||| || | || | | || |
Sbjct 632 TACATG-GTCATCTAGGGGT-CCGTTACATGGGGC-TAATTCAAG----TGATGCACCGC 684
Query 287 -TT-----ATTTGGGTTCCATCGAATCCTCGCGGTGCAGAGATGTTGCCTCCAAGTTTTG 340
|| |||||||||||||||||||| || |||||||||||| || |||| || |
Sbjct 685 ATTGGAAGATTTGGGTTCCATCGAATCCCCGAGGTGCAGAGATGCTGACTCCTGGTATCA 744
Query 341 TTGCAACC-GAATCAGATTTTTACTTACGAAGA-TTGTGGGGATTGCCTAAAGATGAT-T 397
|||| ||| |||||||||| |||||||| ||| || |||||||| ||| | || ||| |
Sbjct 745 TTGC-ACCTGAATCAGATTACTACTTACGCAGACTT-TGGGGATTACCTGAGGAGGATGT 802
Query 398 TACCAGTGGTGAAACCTAAGTATCT-AGTTGCTTTTACTGTTTCTTATGAACAGCGAAA- 455
| || | ||||| || |||||||| | |||| |||||||| || || || ||||
Sbjct 803 T-CC--T-GTGAAGCCAAAGTATCTCA-TTGCGTTTACTGTCGGTTTTGGTCA--GAAAG 855
Query 456 -AAACATTGATGCTTGCATCAAGAAATTCTCAGATA-ACTTCACTATCGTTCTGTTTCAT 513
||| |||||||||| ||||||| || ||| | | | || || || ||||| || ||
Sbjct 856 TGAACGTTGATGCTTGTGTCAAGAAGTTTTCA-AAAGATTTTACAATTGTTCTATTCCAC 914
Query 514 TACGATGGAAAAACCTCGGAATATGATGAATTTGAATGGTCTAAACGGGCGATACACGTG 573
||||| ||| |||| | |||| || ||||| |||||||| ||||| || |||||||||
Sbjct 915 TACGACGGACGAACCACAGAATGGGAAGAATTAGAATGGTCCAAACGCGCAATACACGTG 974
Query 574 AGTGTACCTAAGCAAACCAAGTGGTGGTATGCTAAAAGGTTTCTGCATCCTGATATCATA 633
|| || || ||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct 975 AGCGTGCCAAAGCAAACCAAATGGTGGTATGCTAAAAGGTTTCTGCATCCTGACATTGTG 1034
Query 634 GCACCGTATGAATATATATTCATTTGGGATGAAGATCTTGGTGTTGAAAACTTCGACGCA 693
||||| ||||| ||| ||||||| ||||||||||| || || ||||||||||||| | |
Sbjct 1035 GCACCTTATGACTATGTATTCATCTGGGATGAAGACCTCGGCCTTGAAAACTTCGATGTA 1094
Query 694 GAAGAGTACATCGAGA-TTGTGAAGAAGCATGGTCTAGAAATATCGCAACCCGCTGTGGA 752
|||||||||||| || || | ||||| || |||||||| |||||||| || ||||| ||
Sbjct 1095 GAAGAGTACATC-AGGCTTATAAAGAAACACGGTCTAGAGATATCGCAGCCTGCTGTTGA 1153
Query 753 ATC-AAGAAAATCAATCACATGGAAGATAACAAAGAGAATACCCAGAAGC-GAAGTTCAC 810
|| ||||||| | |||||||| ||||||||||||||| | ||| ||| |||||||||
Sbjct 1154 GTCTAAGAAAAAGA-TCACATGGGAGATAACAAAGAGAAAAACCA-AAGGAGAAGTTCAC 1211
Query 811 AAAGAAGTCGAAG-AGAAACCAGGCCGCTGTAATGACCCTCACCTACCTCCTTGTGCAGG 869
||||| | ||||| |||||||||| || || |||||||||||| | ||||| |||||||
Sbjct 1212 AAAGATG-CGAAGGAGAAACCAGGTCGATGCAATGACCCTCACTTGCCTCCCTGTGCAGC 1270
Query 870 GTTTATAGAGATTATGGCTCCAGTTTTCTCAAGAGATTCATGGCGCTGCGTGTGGCATAT 929
|||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||
Sbjct 1271 GTTTATAGAGATTATGGCTCCAGTATTCTCAAGAGATGCATGGCGTTGCGTGTGGCATAT 1330
Query 930 GATACAGAATGACTTGGTTCACGGTTGGGGTCTTGACTTT-GCGCTAAGAAAATGTGTTG 988
||| ||||| || ||||||||||||||||||||||| ||| || || | ||||| ||||
Sbjct 1331 GATTCAGAACGATTTGGTTCACGGTTGGGGTCTTGA-TTTCGCACTCCGTAAATGCGTTG 1389
Query 989 AGCCTGCACATGAGAAGATTGGTA-TTGTGGATTCTCAATGGATCATTCATCAAAAGATT 1047
||||||||||||||||||| || | |||||||||||||||||||||| |||||| ||
Sbjct 1390 AGCCTGCACATGAGAAGATAGG-AGTTGTGGATTCTCAATGGATCATACATCAATCTCTT 1448
Query 1048 CCTTCTTTAGGAAGCCAGGGA-ACTGCGCAGGAAGGGAAATCCGCGTTCCAAGGGGTAAG 1106
||||||||||| ||||||||| | || || || || ||| | | || |||||||| ||
Sbjct 1449 CCTTCTTTAGGCAGCCAGGGAGAG-GCACAAGACGGTAAAGCAGGGTGGCAAGGGGTGAG 1507
Query 1107 AGAGAGATGTAAACGGGAATGGACAATGTTTCAGAAAA-GAATGACGCGATCAGAGCAGA 1165
||| |||||||||||||||||||||||||| || || ||||| | | || ||| ||
Sbjct 1508 AGACAGATGTAAACGGGAATGGACAATGTTCCA-AAGCCGAATGGCTAGTTCCGAGAAGC 1566
Query 1166 AGTATCTGAAAGAAATTGCA 1185
||||||| || ||||| |||
Sbjct 1567 AGTATCTCAAGGAAATCGCA 1586
> AT1G24570.1 | Symbols: | Protein of unknown function (DUF707)
| chr1:8707197-8709589 FORWARD LENGTH=1244
Length=1244
Score = 267 bits (144), Expect = 2e-70
Identities = 621/842 (74%), Gaps = 69/842 (8%)
Strand=Plus/Plus
Query 341 TTGCAACCGAATCAGATTTTTACTTACGAAGATTGT-GGGGATTGCCTAAAGATGATTTA 399
||||| ||||||| || || ||||| || ||||| | ||||| ||| | || |||||
Sbjct 263 TTGCATCCGAATCGGACTTGTACTTGCGCAGATTATGGGGGA-ACCCTGATGAGGATTT- 320
Query 400 CCAGTGGTGA-AACCTAAG-TATCTAGTTGCTTTTACTGTTTCTTATGAA-CAGCGAAAA 456
||| | | |||| || ||||||| | ||||| || |||| || ||| || |
Sbjct 321 --AGT-GAAACAACC-GAGATATCTAGCAACATTTACAGTGGGTTAT-AATCAGAGACAC 375
Query 457 AACATTGATGCTTGCATCAAG-AAATTCTCAGATAACTTCACTATCGTTCTGTTTCATTA 515
|| || ||||| || | || || || ||||| ||||| ||||| ||||||||||||||
Sbjct 376 AATATAGATGCGTGTGT-TAGCAAGTTTTCAGAGAACTTTACTATTGTTCTGTTTCATTA 434
Query 516 CGAT-G-G-AA-AA--ACCTCGGAATATGATGAATTTGAATGGTCTA--AACGGGCGATA 567
||| | | || || | | || | ||||||| ||||| ||||| | || || |||
Sbjct 435 TGATGGCGTAACAAGTGCAT-GG-A-ATGATGAGTTTGAGTGGTCGAGGAA--TGCAATA 489
Query 568 CACGTGAGTGTAC-CTAAGCAAACCAAGTGGTGGTATGCTAAAAG-GTTTC-TGCATCCT 624
||| | ||||| | ||||| || || ||||||||||| |||| | ||| |||| ||
Sbjct 490 CACATAAGTGT-CAAAAAGCAGACAAAATGGTGGTATGC--AAAGAGATTCTTGCACCCG 546
Query 625 GATATCATAGCACCG-TATGAATATATATTCATTTGGGATGAAGATCTTGGTGTTGAAAA 683
|| || ||||| || || || ||||||||||| |||||||| |||||||| ||||| |
Sbjct 547 GACATTGTAGCA-CGATACGATTATATATTCATATGGGATGAGGATCTTGGAGTTGATCA 605
Query 684 CTTCGACGCAGAAGAGTACAT-CGAGATTGTGAAGAAGCATGGTCTAGAAATATCGCAAC 742
||| | |||||||| ||||| | | || ||||||||||| | || || || ||||| |
Sbjct 606 CTTTAATGCAGAAGAATACATAC-ACATAGTGAAGAAGCACGACCTTGAGATTTCGCAGC 664
Query 743 CCGCTGTGGAATCAAGAAAAT-CAATCACA-TGGAAGAT-AACAAAGAGAATACCCAGA- 798
| | | ||| | | ||| | | | | | ||| |||| | |||| |||| | | |
Sbjct 665 CTGGTTTGG-ACCCAGAGACTGGGTTTA-ATTGGCAGATCACCAAA-AGAAGA-GAACAT 720
Query 799 AGCGAAGTTCACAAAGAAGTC-GAAGAGAAAC-CAGGCCGCTG-TAATGACCCTCACCTA 855
|| ||||| ||| ||| || | || ||||||| | | | | || | | | |||| ||
Sbjct 721 AGTGAAGTCCAC-AAGGAGACAGATGAGAAACTC-GACTGGTGCT-CTAATCCTCCCCGG 777
Query 856 CCTCCTTGTGCAGGGTTTATAGAGATTATGGCTCCAGTTTTCTCAAGAGATTCATGGCGC 915
||||| ||||| | || | ||||| |||||||| || |||||||||||| ||||||||
Sbjct 778 CCTCCATGTGCTGCATTCGTGGAGATAATGGCTCCTGTATTCTCAAGAGATGCATGGCGC 837
Query 916 TGCGTGTGGCATATGATACAGAATGACTTGGTTCACGGTTGGGGTCTTGACTTTGCGCTA 975
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||
Sbjct 838 TGCGTGTGGCATATGATCCAGAATGATTTGGTTCACGGTTGGGGTCTTGACTTTGCACTG 897
Query 976 AGAAAATGTGTTGAG---CCTGCACATGAGAAGATTGGTATTGTGGATTCTCAATGGATC 1032
|||| |||||||||| |||||| ||||||||| || || || || || || ||||||
Sbjct 898 AGAAGATGTGTTGAGGAGCCTGCATTTGAGAAGATAGGAATAGTAGACTCACAGTGGATC 957
Query 1033 ATTCATCAAAAGATTCCTTCT-TTAGG-AAGCCAGGG-AACTGC-GCAGGAA-GGGAAAT 1087
|||||||| || ||||| || || || |||||| || || | | || ||||||
Sbjct 958 GTTCATCAATTTATCCCTTCCCTT-GGCAA-CCAGGGGAAA-GCAG-AT-AACGGGAAAG 1012
Query 1088 C-CGCGTTCCAAGGGGTAAGAGAGAGATGT-AAACGGGAATGGACAATGTTTC-AGAAAA 1144
| | | | |||||||| || || |||||| ||| || |||||| |||||| | |||| |
Sbjct 1013 CAC-CATGGCAAGGGGTGAGGGATAGATGTCAAATGG-AATGGAAAATGTT-CGAGAACA 1069
Query 1145 GA 1146
||
Sbjct 1070 GA 1071
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59688448005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5