BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg322854
Length=1566
Score E
Sequences producing significant alignments: (Bits) Value
AT3G27300.1 | Symbols: G6PD5 | glucose-6-phosphate dehydrogenas... 2523 0.0
AT5G40760.1 | Symbols: G6PD6 | glucose-6-phosphate dehydrogenas... 1548 0.0
> AT3G27300.1 | Symbols: G6PD5 | glucose-6-phosphate dehydrogenase
5 | chr3:10083049-10086696 REVERSE LENGTH=1955
Length=1955
Score = 2523 bits (1366), Expect = 0.0
Identities = 1494/1555 (96%), Gaps = 12/1555 (1%)
Strand=Plus/Plus
Query 15 TTCTGGTCAATGGCATATGGAGAAGAGGTCTACTTTAAAGAATGATTCGTTTGTAAAAGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 141 TTCTGGTCAATGGCATATGGAGAAGAGGTCTACTTTAAAGAATGATTCGTTTGTAAAAGA 200
Query 75 ATACAATCCAGTCTCTGAAACTGGGAGTCTCTCTATCATTGTTCTTGGTGCTTCTGGTGA 134
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 ATACAATCCAGTCACGGAAACTGGGAGTCTCTCTATCATTGTTCTTGGTGCTTCTGGTGA 260
Query 135 TCTTGCTAAGAAGAAGACTTTTCCTGCACTTTTCCATCT-TTACCATCAGGGATTTCTTA 193
|||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||
Sbjct 261 TCTTGCTAAGAAGAAGACTTTTCCTGCACTTTTCAATCTATT-TCATCAGGGATTTCTTA 319
Query 194 ATCCAGATGAAGTTCATATATTTGGATATGCAAGGAGTAAGATTTCTGATGAGGAGCTTA 253
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 320 ATCCAGATGAAGTTCATATATTTGGATATGCAAGGAGTAAGATTACTGATGAGGAGCTTA 379
Query 254 GAGATAAAATCCGCGGATATCTTGTTGATGAGAGGAATGCATCTGACAAAGCAGAAGCTT 313
||||||||||||||||||||||||||||||||| |||||||||| | ||| |||||||||
Sbjct 380 GAGATAAAATCCGCGGATATCTTGTTGATGAGAAGAATGCATCTAAGAAAACAGAAGCTT 439
Query 314 TGTCCAAGTTTTTAAAGCTGATTAAGTATGTGAGTGGACCTTATGATTCTGAGGAAGGGT 373
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 TGTCCAAGTTTCTAAAGCTGATTAAGTATGTGAGTGGACCTTATGATTCTGAGGAAGGGT 499
Query 374 TTAAGAGATTAGATGAGGCGATTTCGGAGCACGAGATCTCTAAAAGGACTTCTGAAGGAT 433
||||||||||||| ||||||||| |||||||||||| ||||||| |||| |||||||||
Sbjct 500 TTAAGAGATTAGACAAGGCGATTTTGGAGCACGAGATATCTAAAAAGACTGCTGAAGGAT 559
Query 434 CTTCTAGGAGATTGTTTTATCTTGCACTTCCGCCGTCTGTATACCCTCCTGTAAGCAAGA 493
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 560 CTTCGAGGAGATTGTTTTATCTTGCACTTCCTCCGTCTGTATACCCTCCTGTAAGCAAGA 619
Query 494 TGATCAAGGCATGGTGCACTAACAAATCTGATCTTGGTGGATGGACTCGGATCGTTGTTG 553
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 620 TGATCAAGGCATGGTGCACTAACAAATCTGATCTTGGTGGATGGACTAGGATTGTTGTTG 679
Query 554 AGAAGCCGTTTGGAAAGGATTTGGAATCTGCAGAGCAACTGAGTTCTCAGATTGGGGCGC 613
|||| || ||||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct 680 AGAAACCATTTGGAAAGGATTTGGAATCTGCAGAGCAGCTGAGTTCTCAGATTGGAGC-C 738
Query 614 -TGTTTGATGAACCACAGATTTATCGTATTGATCACTATCTAGGAAAAGAATTAGTCCAA 672
||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||
Sbjct 739 TTGTTTGAAGAACCACAGATTTATCGTATTGATCACTATCTGGGAAAAGAGTTAGTTCAA 798
Query 673 AACATGTTGGTTCTTCGCTTTGCCAATCGTTTGTTTTTGCCACTATGGAACCGCGATAAT 732
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct 799 AACATGTTGGTTCTTCGGTTTGCCAATCGCTTGTTTTTGCCACTATGGAACCGCGACAAT 858
Query 733 ATTGCAAACGTACAGATCGTTTTCAGAGAAGATTTCGGAACTGAAGGTCGCGGGGGATAT 792
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 859 ATTGCAAACGTACAGATCGTTTTCAGAGAAGATTTTGGAACTGAAGGTCGCGGTGGATAT 918
Query 793 TTTGATGAATACGGAATCATTCGCGATATTATTCAAAACCACTTGCTCCAGGCAAGTGTT 852
||||||||||||||||||||||| ||||||||||||||||||||||| | | || |||
Sbjct 919 TTTGATGAATACGGAATCATTCGTGATATTATTCAAAACCACTTGCT-C---C-AG-GTT 972
Query 853 CTTTGCCTTGTTGCCATGGAGAAACCAATCTCCCTTAAACCCGAGCACATCCGGGATGAG 912
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 973 CTTTGCCTTGTCGCCATGGAGAAACCAATCTCTCTTAAACCCGAGCACATCCGGGATGAG 1032
Query 913 AAAGTGAAGGTTCTTCAATCTGTGATTCCCATAAAAGATGAAGAGGTGGTTCTTGGACAA 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 AAAGTGAAGGTTCTTCAATCTGTGATTCCCATAAAAGATGAAGAGGTGGTTCTTGGACAA 1092
Query 973 TATGAAGGATATAGAGATGATCCAACTGTTCCAAATGACTCAAACACTCCAACGTTTGCC 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093 TATGAAGGATATAGAGATGATCCAACTGTTCCAAATGACTCAAACACTCCAACGTTTGCC 1152
Query 1033 ACAACAATTCTTCGCAT-AGACAATGAAAGATGGGAAGGTGTTCCTTTTATACTGAAGGC 1091
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1153 ACAACAATTCTTCGCATTA-ACAATGAAAGATGGGAAGGTGTTCCTTTTATACTGAAGGC 1211
Query 1092 CGGAAAGGCAATGAGTTCAAAGAAGGCAGATATTCGCATTCAGTTTAAGGATGTTCCTGG 1151
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1212 CGGAAAGGCAATGAGTTCAAAGAAGGCAGATATTCGCATTCAGTTTAAAGATGTTCCTGG 1271
Query 1152 CGACATATTTAAATGTCAAAACCAAGGGAGGAACGAGTTTGTTATACGCTTGCAGCCTTC 1211
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1272 CGACATATTCAAATGTCAAAACCAAGGGAGGAACGAGTTTGTTATACGCTTGCAGCCTTC 1331
Query 1212 AGAGGCCATGTACATGAAGCTAACTGTGAAGCAACCGGGTCTGGAGATGCAAACTGTGCA 1271
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1332 AGAGGCCATGTACATGAAGCTAACTGTGAAGCAACCGGGTCTGGAGATGCAAACCGTGCA 1391
Query 1272 GAGTGAACTAGACCTGTCATACAAGCAGCGTTACCAAGATGTCTCGATTCCAGAGGCTTA 1331
||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1392 GAGTGAACTAGACCTATCGTACAAGCAGCGTTACCAAGATGTCTCAATTCCAGAGGCTTA 1451
Query 1332 CGAACGCCTTATTCTTGACACAATCAAAGGCGACCAACAACACTTTGTTCGCAGAGACGA 1391
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1452 CGAACGCCTTATTCTTGACACAATCAGAGGCGACCAACAACACTTTGTTCGCAGAGACGA 1511
Query 1392 ATTGAAGGCAGCTTGGGAAATCTTCACTCCATTGCTTCACAGGATCGACAAGGGAGAAGT 1451
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1512 ATTAAAGGCAGCTTGGGAAATCTTCACTCCACTGCTTCACAGGATCGACAAGGGAGAAGT 1571
Query 1452 AAAATCGATCCCATACAAACAAGGTAGCCGTGGCCCAGCGGAAGCAGATCAGCTACTTAA 1511
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1572 GAAATCGGTCCCATACAAACAAGGTAGCCGTGGCCCAGCGGAAGCAGATCAGCTACTTAA 1631
Query 1512 GAAAGCTGGTTATACGCAGACCCATGGCTACATTTGGATCCCTCCTACATTGTAA 1566
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 1632 GAAAGCTGGTTATATGCAGACTCATGGCTACATTTGGATCCCTCCTACATTGTAA 1686
> AT5G40760.1 | Symbols: G6PD6 | glucose-6-phosphate dehydrogenase
6 | chr5:16310748-16314774 FORWARD LENGTH=1959
Length=1959
Score = 1548 bits (838), Expect = 0.0
Identities = 1327/1561 (85%), Gaps = 41/1561 (3%)
Strand=Plus/Plus
Query 16 TCTGGTCAATGGCATATGGAGAAGAGGTCTAC-TTTAAAGAATGATTCGTTTGTAAAAGA 74
|||||||||||||| | ||||| |||||||| ||| | ||||||||||||||| | |||
Sbjct 200 TCTGGTCAATGGCACGTTGAGAAAAGGTCTACGTTT-AGGAATGATTCGTTTGTGAGAGA 258
Query 75 ATACAATCCAG-TCTCTGAAACTGGGAGTCTCTCTATCATTGTTCTTGGTGCTTCTGGTG 133
||| | || || | |||||||| |||| || ||||| |||||||||||||||||||
Sbjct 259 ATATGGTATAGTTC-CAGAAACTGGTTGTCTTTCAATCATAGTTCTTGGTGCTTCTGGTG 317
Query 134 ATCTTGCTAAGAAGAAGACTTTTCCTGCACTTTTCCATCTT-TACCATCAGGGATTTCTT 192
|||||||||||||||||||||||||||| ||||| | ||| |||| ||||||||||||
Sbjct 318 ATCTTGCTAAGAAGAAGACTTTTCCTGCTCTTTTTAA-CTTATACCGTCAGGGATTTCTC 376
Query 193 AATCCAGATGAAGTTCATATATTT-GGATATGCAAGGAGTAAGATTTCTGATGAGGAGCT 251
|||||||||||||||||||| ||| || ||||| |||| ||||||||||||||| |||||
Sbjct 377 AATCCAGATGAAGTTCATAT-TTTCGGGTATGCGAGGACTAAGATTTCTGATGAAGAGCT 435
Query 252 TAGAGATAAAATCCGCGGATATCTTGTTGATGAGAGGAATGCATCTGACAAAGCAGAAGC 311
||||||| || || ||||||||||||||||||| |||||| | | ||| || |||||
Sbjct 436 GAGAGATAGGATTCGTGGATATCTTGTTGATGAGAAGAATGC-TGAG-CAA-GCTGAAGC 492
Query 312 TTTGTCCAAGTTTTTAAAGCTGATTAAGTATGTGAGTGGACCTTATGATTCTGAGGAAGG 371
|||||| |||||| | |||||||||||||||||||||| ||||||||| ||||||| ||
Sbjct 493 TTTGTCAAAGTTTCTGCAGCTGATTAAGTATGTGAGTGGCCCTTATGATGCTGAGGAGGG 552
Query 372 GTTTAAGAGATTAGATGAGGCGATTTCGGAGCACGAGATCTCTAAAAGGACTTCTGAAGG 431
||| |||||||||| |||| ||||| |||||||| ||||| |||| | | |||||||
Sbjct 553 GTTCCAGAGATTAGACAAGGCAATTTCAGAGCACGAAATCTCCAAAAATAGTACTGAAGG 612
Query 432 ATCTTCTAGGAGATTGTTTTATCTTGCACTTCCGCCGTCTGTATACCCTCCTGTAAGCAA 491
|||||||| ||| ||||||||||||||||||| |||||||| || ||| ||||| ||||
Sbjct 613 GTCTTCTAGAAGACTGTTTTATCTTGCACTTCCACCGTCTGTTTATCCTTCTGTATGCAA 672
Query 492 GATGATCAAGGCATGGTGCACT-AACAAATCTGATCTTGGTGGATGGACTCGGATCGTTG 550
|||||||||| | || |||| | |||||||||||||||||||||||||| ||||| ||||
Sbjct 673 GATGATCAAGACGTGCTGCA-TGAACAAATCTGATCTTGGTGGATGGACACGGATTGTTG 731
Query 551 TTGAGAAGCCGTTTGGAAAGGAT-TTGGAATCTGCAGAGCAACTGAGTTCTCAGATTGGG 609
| |||||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct 732 TGGAGAAGCCATTTGGCAAGGACCTTG-AATCTGCAGAGCAACTGAGTTCTCAGATTGGA 790
Query 610 GCGCTGTTTGATGAACCACAGATTTATCGTATTGATCACTATCTAGGAAAAGAATTAGTC 669
| | | ||||||||| ||||||| |||||||| || || ||||| || || ||||||||
Sbjct 791 GAGTTATTTGATGAATCACAGATCTATCGTATAGACCATTATCTTGGGAAGGAATTAGTT 850
Query 670 CAAAACATGTTGGTTCTTCGCTTTGCCAATCGTTTGTTT-TTGCCACTATGGAACCGCGA 728
|||||||||||||| || || ||||| ||||| || ||| |||||||| |||||||| ||
Sbjct 851 CAAAACATGTTGGTCCTCCGGTTTGCAAATCGCTT-TTTCTTGCCACTTTGGAACCGTGA 909
Query 729 TAATATTGCA-AACGTACAGATCGTTTTCAGAGAAGATTTCGGAACTGAAGGTCGCGGGG 787
||||| | | ||||| ||||| |||||||| |||||||| ||||||||||| || || |
Sbjct 910 CAATATCG-AGAACGTGCAGATTGTTTTCAGGGAAGATTTTGGAACTGAAGGGCGTGGCG 968
Query 788 GATATTTTGATGAATACGGAATCATTCGCGATATTATTCAAAACCA-CTTGCTCCAGGCA 846
|||||||||| ||||| ||||| || || ||||||||||||||||| || ||| | ||
Sbjct 969 GATATTTTGACGAATATGGAATAATCCGTGATATTATTCAAAACCATCT-GCT--A--CA 1023
Query 847 AGTGTTCTTTGCCTTGTTGCCATGGAGAAACCAATCTCCCTTAAACCCGAGCACATCCGG 906
| |||||||||||||||||||||||||||||||| || |||||||| ||||| ||||||
Sbjct 1024 -G-GTTCTTTGCCTTGTTGCCATGGAGAAACCAATATCTCTTAAACCTGAGCATATCCGG 1081
Query 907 GATGAGAAAGTGAAGGTTCTTCAATCTGTGATTCCCATAAAAGATGAAGAGGTGGTTCTT 966
||||||||||||||||| |||||||||||| |||| |||| ||||| ||||| ||||||
Sbjct 1082 GATGAGAAAGTGAAGGTGCTTCAATCTGTGGTTCCGATAAGCGATGACGAGGTAGTTCTT 1141
Query 967 GGACAATATGAAGGATATAGAGATGATCCA-ACTGTTCCAAATGACTCAAACACTCCAAC 1025
|||||||| ||||||||||| |||||| | ||||||||||| |||||||||||||||||
Sbjct 1142 GGACAATACGAAGGATATAGGGATGATG-ATACTGTTCCAAACGACTCAAACACTCCAAC 1200
Query 1026 GTTTGCCACAACAATTCTTCGCATAGACAATGAAAGATGGGAAGGTGTTCCTTTTATACT 1085
|||||||||||||| ||||||||| |||| |||||||||||||||||||| |||||| |
Sbjct 1201 ATTTGCCACAACAATCCTTCGCATACACAACGAAAGATGGGAAGGTGTTCCATTTATATT 1260
Query 1086 GAAGGCCGGAAAGGCAATGAGTTCAAAGAAGGCAGATATTCGCATTCAGTTTAAGGATGT 1145
||||||||||| || ||| ||||| ||||||||| ||||||||||| || ||||||||
Sbjct 1261 AAAGGCCGGAAAAGCGTTGAATTCAAGGAAGGCAGAAATTCGCATTCAATTCAAGGATGT 1320
Query 1146 TCCTGGCGACATATTTAAATGTCAAAACCAAGGGAGGAACGAGTTTGTTATACGCTTGCA 1205
|| ||||||||||| | ||||||||| ||||| |||||||||||||| |||||||||||
Sbjct 1321 CCCAGGCGACATATTCAGATGTCAAAAGCAAGGAAGGAACGAGTTTGTGATACGCTTGCA 1380
Query 1206 GCCTTCAGAGGCCATGTACATGAAGCTAACTGTGAAGCAACCGGGTCTGGAGATGCAA-A 1264
||||||||||| ||||||||||| |||||||| |||||||| ||||| || ||| || |
Sbjct 1381 ACCTTCAGAGGCAATGTACATGAAACTAACTGTTAAGCAACCAGGTCTAGATATG-AATA 1439
Query 1265 CTGTGCAGAGTGAACTAGACCTGTCATACAAGCAGCGTTACCAAGATGTCTCGATTCCAG 1324
||||||| |||||||||||| |||| || ||| || || |||| |||| | || || |
Sbjct 1440 CTGTGCAAAGTGAACTAGACTTGTCGTATGGGCAACGGTATCAAGGTGTCGCTATCCCTG 1499
Query 1325 AGGCTTACGAACGCCTTA-TTCTTGACACAATCAAAGGCGACCAACAACACTTT-GTTCG 1382
|||| ||||| ||| ||| |||||||||||||||||||||| |||||||| ||| |||||
Sbjct 1500 AGGCATACGAGCGC-TTAATTCTTGACACAATCAAAGGCGATCAACAACA-TTTCGTTCG 1557
Query 1383 CAGAGACGAATTGAAGGCAGCTTGGGAAATCTTCACTCCATTGCTTCACAGGATCGACAA 1442
||||||||||| |||| || ||||| |||||||| || | || ||||||||||||||
Sbjct 1558 TAGAGACGAATTAAAGGTTGCGTGGGAGATCTTCACGCCGCTACTCCACAGGATCGACAA 1617
Query 1443 GGGAGAAGTAAAATCGATCCCATACAAACAAGGTAGCCGTGGCCC-AGCGGAAGCAGATC 1501
||||||||||| || ||||||||||||| ||| ||||| || || | | |||| ||||
Sbjct 1618 AGGAGAAGTAAAGTCAATCCCATACAAACCAGGAAGCCGAGGACCGAAAG-AAGCTGATC 1676
Query 1502 AGCTACTTA-AGAAAGCTGGTTATACG-CAGACCCATGGCTACATTTGGATCCCTCCTAC 1559
||||||| | |||||||||||||| | ||||| || ||||| || ||||||||||||||
Sbjct 1677 AGCTACT-AGAGAAAGCTGGTTAT-CTTCAGACTCACGGCTATATCTGGATCCCTCCTAC 1734
Query 1560 A 1560
|
Sbjct 1735 A 1735
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77308839300
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5