BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg322858
Length=3144
Score E
Sequences producing significant alignments: (Bits) Value
AT3G27325.2 | Symbols: | hydrolases, acting on ester bonds | c... 3140 0.0
> AT3G27325.2 | Symbols: | hydrolases, acting on ester bonds |
chr3:10095089-10102229 FORWARD LENGTH=3718
Length=3718
Score = 3140 bits (1700), Expect = 0.0
Identities = 1856/1930 (96%), Gaps = 15/1930 (1%)
Strand=Plus/Plus
Query 1 ATGCGTGATGTAAGATTTGCTATGAGCATTCGACCAAGGCTGAGGATAGTTGGCGTAGTG 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 319 ATGCGTGATGTAAGATTTGCTATGAGCATTCGACCAAGGCTGAGGATAGTTGGCGTTTTG 378
Query 61 ATTTTAGCAGCATGGATTGGGTTTGCAGCTTTGTTTGGTTTGCTAAAACCTATAAAGAAT 120
|||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 379 ATTTTAGCGGCATGGATTGGGCTTGTGGCTTTGTTTGGTTTGCTAAAACCTATAAAGAAT 438
Query 121 GGATGTACTATGACTTACATGTATCCCACTTATATTCCTATCTCTGTGACGGATGATGCA 180
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||
Sbjct 439 GGTTGTACTATGACTTACATGTATCCTACTTACATTCCTATCTCTGTGACGGATGATACA 498
Query 181 ACTCCTGGAAGATATGGACTCTATCTTTACCACGAAGGTTGGAGGAAGATTGACTTTAAG 240
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 499 ACTCCTGGAAGATATGGACTTTATCTTTACCATGAAGGTTGGAGGAAGATTGACTTTAAG 558
Query 241 GAGCATCTGAAGAAACTTAGTGGAGTTCCAGTTCTTTTCATTCCAGGCAATGCTGGTAGC 300
|| || || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 559 GAACACCTTAAGAAACTTAGTGGAGTTCCTGTTCTTTTCATTCCAGGCAATGCTGGTAGC 618
Query 301 TACAAGCAGGTCAGGTCTGTGGCAGCAGAATCTGATAGAGCGTTTCAgggggggCCATTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 619 TACAAGCAGGTCAGGTCTGTGGCAGCAGAATCTGATAGAGCGTTTCAGGGGGGCCCATTT 678
Query 361 GAGCGCACATTTTACCAGGAAGCTTCTCTATTCCGTGGGGGAGGTGCAGATACGGAGTTT 420
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 679 GAGCGCACATTTTACCAGGAAGCTTCTCTACTCCGTGGGGGAGGTGCAGATACGGAGTCT 738
Query 421 GTAGACTATGATTTGCCTAGTCAGTACAGTAACAGACTAGATTGGTTTGCTGTGGATCTT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 739 GTAGACTATGATTTGCCTAGTCAGTACAGTAACAGACTAGATTGGTTTGCTGTGGATCTT 798
Query 481 GAAGGTGAACATTCTGCAATGGATGGTCGCATACTTGAGGAGCACACTGAATATGTCGTA 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 799 GAAGGTGAACATTCTGCAATGGATGGTCGCATACTTGAGGAGCACACTGAATATGTCGTA 858
Query 541 TATGCCATTCATAGGGTGGGGATTTTGATAATTCTAGATCAATATAAGGAATCTCATGAT 600
||||||||||||| | | ||||||||||||||||||||||||||||||
Sbjct 859 TATGCCATTCATA-------G-----G---ATTCTAGATCAATATAAGGAATCTCATGAT 903
Query 601 ACCAGAGAAAGAGAAGGTGCCGCTGCGTCCAGCAACTTACCACATAATGTGATATTGGTT 660
|||||||||||||||||||||||||||||||| || ||||||||| ||||||| ||||||
Sbjct 904 ACCAGAGAAAGAGAAGGTGCCGCTGCGTCCAGTAAATTACCACATGATGTGATCTTGGTT 963
Query 661 GGCCATTCTATGGGTGGTTTTGTTGCCAGAGCTGCTGCAGTCCATCCTCGTTTGCGGAAA 720
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 964 GGGCATTCTATGGGTGGTTTTGTTGCTAGAGCTGCTGCAGTCCATCCTCGTTTGCGGAAA 1023
Query 721 TCAGCTGTGCAAACCATTATAACACTCTCAAGTCCACACCAATCACCTCCTCTGGCATTG 780
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1024 TCAGCTGTGCAAACCATTCTAACACTCTCAAGTCCACACCAATCACCTCCTCTGGCATTG 1083
Query 781 CAGCCATCCTTGGGGCATTACTTTGCTCAAGTGAATCGAGAATGGAAAAAAGGTTATGAA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 CAGCCATCCTTGGGGCATTACTTTGCTCAAGTGAATCGAGAATGGAAAAAAGGTTATGAA 1143
Query 841 GTTCAAACATCCCCTGGGGGAAGTTATGTGTCTGACCCATTACTATCCGGAGTTATTGTT 900
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 1144 GTTCAAACATCCCCTGGGGGAAATTATGTGTCTGACCCATTACTATCCGGAGTTGTTGTT 1203
Query 901 GTATCCATTTCCGGTGGCTACAATGACTATCAGGTTCGATCGAAGTTAGAGTCACTTGAT 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1204 GTATCCATTTCCGGTGGCTACAATGACTATCAGGTTCGATCGAAGTTAGAGTCACTTGAT 1263
Query 961 GGCATTGTCCCTTCAAGTCACGGCTTTATGATAAGTAGTACAAGCATGAAAAACGTGTGG 1020
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1264 GGCATTGTCCCTTCAAGTCACGGCTTTATGATAAGTAGTACAAGCATGACAAACGTGTGG 1323
Query 1021 CTGTCAATGGAACATCAAGCTATCTTGTGGTGTAACCAATTGGTTGTTCAAGTTTCACAT 1080
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1324 CTGTCAATGGAACATCAAGCTATTTTGTGGTGTAACCAATTGGTTGTTCAAGTTTCACAT 1383
Query 1081 ACGCTTCTCAGTTTGGTGGACTCGAAAACTAATCAGCCATTTTCTGATACTGATAAGCGA 1140
|||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1384 ACGCTTCTTAGTATGGTTGACTCGAAAACTAATCAGCCATTTTCTGATACTGATAAGAGA 1443
Query 1141 CTTTGGGTTTTAACCAGAATGCTTCAAAGTGCATTAGCTCAAAGTTTCAATGGAATGACA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1444 CTTTGGGTTTTAACCAGAATGCTTCAAAGTGCATTAGCTCAAAGTTTCAATGGAATGACA 1503
Query 1201 CCCATGGAAGTCTCTCATGAGTTACCCATGTTGGCCTCAAAGGGCTCTACGTGTTCCCTG 1260
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct 1504 CCCATGGAAGTCTCTCATGAGTTACCCATATTGGCCTCAAAGGGCTCTACGTGTTTCCTG 1563
Query 1261 GATTGGAGAGATGATGCTCTCGATAGGGATCTATACATACAAACAAGTACTGTTACGATT 1320
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1564 GATTGGAGGGATGATGCTCTCGATAGGGATCTATACATACAAACAAGTACTGTCACGATT 1623
Query 1321 TTGGCAATGGACGGGAGAAGGCGCTGGTTGGACATAGATTTATTGGGGTCAAATGGAAAG 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1624 TTGGCAATGGACGGGAGAAGGCGCTGGTTGGACATAGATTTATTGGGGTCAAATGGAAAG 1683
Query 1381 AACCACTTTATCTTTGTTACAAATCTGGCGCCCTGTTCTGGAGTAAGACTCCATCTATGG 1440
|| |||||||| ||||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct 1684 AATCACTTTATATTTGTCACAAATCTGGTGCCTTGTTCTGGAGTAAGACTCCATCTATGG 1743
Query 1441 CCTGAGAAGGAGAAATCAAATTCAAATTTACCGGTTTGTGAAAGGATCGTGGAAGTTACA 1500
||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||
Sbjct 1744 CCTGAGAAGGAGAAATCGAATTCAAATTTACCGGTTTGTGAAAGGGTCTTGGAAGTTACA 1803
Query 1501 TCAAAGATGGTTCTCATTCCGGCAGGCCCTGCACCAAAACAGTCGGAACCAGGGAGTCAG 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1804 TCAAAGATGGTTCTCATTCCGGCAGGCCCTGCACCAAAACAGTCGGAACCAGGGAGTCAG 1863
Query 1561 ACTGAACAAGCTCCCCCATCTGCAGTGCTGAAACTGGGGCCGGAAGACATGCGTGGATTT 1620
|||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct 1864 ACTGAACAAGCTCCCCCATCTGCAGTACTGAAGCTGGGGCCTGAAGACATGCGTGGATTC 1923
Query 1621 AGATTCTTGACTATCTCAGTTGCGCCTCGCGAAGCCGTTTCTGGTAAACCTCCTGTAGCA 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1924 AGATTCTTGACTATCTCAGTTGCGCCTCGCGAAGCCGTTTCTGGTAAACCTCCAGTAGCA 1983
Query 1681 GTTTCCATGGCAGTAGGGCAGTTCTTTAATCCCGGAAACGGGGCCGTGGAGGTCTCATCT 1740
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1984 GTTTCCATGGCAGTAGGGCAGTTCTTTAATCCCGGAGACGGGGCCGTGGAGGTCTCATCT 2043
Query 1741 CAATCAATGCTCTTATCCACTTACTGGGCAAAGGAAATATTTTTGAAGGAGGACCAACCT 1800
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2044 CAATCAATGCTCTTATCCACTTACTGGGCAAAGGAAATATTTTTGAAGGAGGACCATCCT 2103
Query 1801 CTTGCTTACAATCTATCGTTTGCTACCAGCTTAGGTCTATTGCCCACAACACTGTCCCTG 1860
|| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 2104 CTAGCTTACAATCTATCGTTTTCTACCAGCTTAGGTCTATTGCCCGCAACACTGTCCCTG 2163
Query 1861 AAAACTGCTGGATGTGGAATTAAAACTTTTGGTTTACCAGATGGCGAGACAGGAGACTTG 1920
|||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2164 AAAACTACTGGATGCGGAATTAAAACTTTTGGTTTACCAGACGGCGAGACAGGAGACTTG 2223
Query 1921 GACAAGGATA 1930
||||||||||
Sbjct 2224 GACAAGGATA 2233
Score = 1147 bits (621), Expect = 0.0
Identities = 663/684 (97%), Gaps = 0/684 (0%)
Strand=Plus/Plus
Query 2461 GCAATCCGAATTCTGAAGCTCAACACAAAAATTGTTATGACACTAGTCGCAGTTACCTTG 2520
|||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct 2893 GCAATCCGAATTCTGAAGCTCAACACAACAATTCTTATGACACTAATCGCAGTTACCTTG 2952
Query 2521 GTGTCCTTTGTTCATCCAGCTTTGGGTCTTTTTGTACTCCTCGCCTCTCATGCCCTTTGC 2580
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2953 GTGTCCTTTGTTCATCCGGCTTTGGGTCTTTTTGTACTCCTCGCCTCTCATGCCCTTTGC 3012
Query 2581 TGCCATAACTCCATGTGCTGTATTGTGACGTCATCGAGGAGAAAGGAATCAGTCGACCAG 2640
|||||||||||||||||||||||| ||| | |||| | ||||||||||||| ||||||||
Sbjct 3013 TGCCATAACTCCATGTGCTGTATTATGATGGCATCAAAGAGAAAGGAATCACTCGACCAG 3072
Query 2641 AAAAATGAAGCCGAGCGTAAAACGCGACATCCCTCGAGCAGAGAGGATCCCGTGTCAGGA 2700
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3073 AAAAATGAAGCCGAGCGTAAAACGCGACATCCCTCAAGCAGAGAGGATCCCGTGTCAGGA 3132
Query 2701 GACTTGTCTGAAAAGTCATTTGTTGAGACACAAGCAGACATCTTCAACCACAGGCACGGC 2760
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3133 GACTTGTCTGAAAAGTCATTTGTTGAGACGCAAGCAGACATCTTCAACCACAGGCACGGT 3192
Query 2761 TTACTAATATTGCATCTCCTTGCAGCTTTGATGTTCGTACCCTCTCTTGCCGCTTGGTTC 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3193 TTACTAATATTGCATCTCCTTGCAGCTTTGATGTTCGTACCCTCTCTTGCCGCTTGGTTC 3252
Query 2821 CAGCGGATCGGAACAGGACAAAGCTTCCCTTGGTTTGCTGACTCTGCTCTCTGCGTTGGT 2880
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3253 CAGCGGATAGGAACAGGACAAAGCTTCCCTTGGTTTGCTGACTCGGCTCTCTGCGTTGGC 3312
Query 2881 GTAATCTTCCATGGAATACTGAACTCGAGACCCGAGTCAAGCATCCTACGCTCTTTCCCA 2940
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3313 GTAATCTTCCATGGAATACTGAACTCGAGACCCGAGTCAAGCATTCTACGCTCTTTCCCG 3372
Query 2941 TTTCTCTCAGGACACCAACTCCGTCCGCATCACATCTATCTTCTCGCTGGCTACTACTGC 3000
||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 3373 TTTTTCTCAGGACACCAAATCCGTCCCCATCACATCTATCTTCTCGCTGGCTACTACTGC 3432
Query 3001 TTCTTCTCCGGGCTAGAGTTGGCTCCATACAAAGTGTTCTATGCGATAGCTTCTTTAGGC 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3433 TTCTTCTCCGGGCTAGAGTTGGCTCCATACAAAGTGTTCTATGCGATAGCTTCTTTAGGC 3492
Query 3061 TATATCTCTTTGACTCTTAAGATCTCACAGGTGAACAAGAACGACCTTCGTTTCCGTACT 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3493 TATATCTCTTTGACTCTTAAGATCTCACAGGTGAACAAGAACGACCTTCGTTTCCGTACT 3552
Query 3121 AAAAGCAGAATACACAGAAACTGA 3144
||||||||||||||||||||||||
Sbjct 3553 AAAAGCAGAATACACAGAAACTGA 3576
Score = 782 bits (423), Expect = 0.0
Identities = 451/465 (97%), Gaps = 0/465 (0%)
Strand=Plus/Plus
Query 1997 AGCTCTGCAAATTGCGTTGTTTCCCACCTGTTGCTCTTGCCTGGGATTCTGCTTCTGGAC 2056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2234 AGCTCTGCAAATTGCGTTGTTTCCCACCTGTTGCTCTTGCCTGGGATTCTGCTTCTGGAC 2293
Query 2057 TTCACGTTTTTGCAAATCTCTACAGTGAGACAATAGTTATTGATTCATCACCAGCTCTTT 2116
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2294 TTCACGTTTTTGCAAATCTATACAGTGAGACAATAGTTATTGATTCATCACCAGCTCTTT 2353
Query 2117 GGAGTTCTCAGAGTTCTGAGAAAACTACCGTTATGCTACTGGTTGACCCTCATTGCTCAT 2176
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 2354 GGAGTTCTCAGAGTTCTGAGAAAACAACCGTTATGCTATTGGTTGACCCTCATTGCTCAT 2413
Query 2177 ACACAGCAAGTGTTCATGTTTCTGCTCCAGCCATCTCCAGCAGATTTGTCCTTCTATATG 2236
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2414 ACACCGCAAGTGTTCATGTTTCTGCTCCAGCCATGTCCAGCAGATTTGTCCTTCTATATG 2473
Query 2237 GTCCTCAGATAGTTGGCATCTCATTTGCCGTCGTAATGTTCGCTCTTATGCGGCAAGCTA 2296
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 2474 GTCCTCAGATAGTTGGCTTCTCATTTGCCGTCATAATGTTCGCTCTTATGCGGCAAGCTA 2533
Query 2297 ATCAATGGGACAACAAACTATCAGTGCCACCATTGCTCTCTGCTGTGGAGTACAATTTAG 2356
||||||||||||||||| |||||||||||||||| || |||||||| |||||||||||||
Sbjct 2534 ATCAATGGGACAACAAATTATCAGTGCCACCATTACTTTCTGCTGTAGAGTACAATTTAG 2593
Query 2357 AAATGCCATCTCCATTTCTGCTTCTAGCTATTTTACCTCTTATAAGTTCATTGTTCTACT 2416
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2594 AAATGCCATCCCCATTTCTGCTTCTAGCTGTTTTACCTCTTATAAGTTCATTGTTCTACT 2653
Query 2417 CCTTCCTAATGGCTCAACCAATTCCTCCCCTCACAAGCTTCACAG 2461
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2654 CCTTCCTAATGGGTCAACCAATTCCTCCCCTCACAAGCTTCACAG 2698
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 156370361331
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5