BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg323014 Length=1011 Score E Sequences producing significant alignments: (Bits) Value AT3G29380.1 | Symbols: | Cyclin-like family protein | chr3:112... 1375 0.0 > AT3G29380.1 | Symbols: | Cyclin-like family protein | chr3:11282407-11283524 REVERSE LENGTH=1011 Length=1011 Score = 1375 bits (744), Expect = 0.0 Identities = 926/1015 (91%), Gaps = 8/1015 (1%) Strand=Plus/Plus Query 1 ATGGAGGAAGAGACTTGCTTGGACTGCAAGAGACCGACCATAACGGTGATTGATCATAGT 60 ||||| |||||||| |||||||||||||||||||| ||||||| |||| ||||||| ||| Sbjct 1 ATGGAAGAAGAGACCTGCTTGGACTGCAAGAGACCAACCATAATGGTGGTTGATCACAGT 60 Query 61 AGCGGCGACACCATCTGCTCAGAGTGTGGCCTTGTCCTCGAAGCTCACATCATCGAATAC 120 ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGCGGTGACACCATCTGTTCGGAGTGTGGCCTTGTCCTCGAAGCTCACATCATCGAATAC 120 Query 121 TCTGAGGAATGGAGAACTTTCGCCTCCGACGACAATCGCAGTGACCGAGACCCAAACCGT 180 ||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||| Sbjct 121 TCTCAGGAATGGAGAACTTTCGCATCCGACGACAATCACAGTGACAGAGACCCAAACCGT 180 Query 181 GTTGGTGCTCCAACGAACCCTCTTCTCAAATCCGGCAATCTCGTTACCGTCATCGAGAAA 240 ||||||||| | || |||||| |||||||||| ||| |||| || ||| ||||||||||| Sbjct 181 GTTGGTGCTGCGACAAACCCTTTTCTCAAATCAGGCGATCTTGTCACCATCATCGAGAAA 240 Query 241 CCTAAAGAAAACGTTTCCTCTGTTGTGTCCAAAGATGACATCTCCACTTTGTGCCGTACA 300 |||||||||| || |||||||||| ||||||||||||||||||||||||||| |||| || Sbjct 241 CCTAAAGAAACCGCTTCCTCTGTTCTGTCCAAAGATGACATCTCCACTTTGTTCCGTGCA 300 Query 301 CAGAATCAAGTCAAGAATCATGAAGAAGATCTAATCAAGAAAGCTTTCGAGGAAATACAG 360 || |||||||||||||| ||||||||||| ||||||||| |||| ||||| ||||||||| Sbjct 301 CATAATCAAGTCAAGAACCATGAAGAAGACCTAATCAAGCAAGCCTTCGAAGAAATACAG 360 Query 361 AGAATGACTGATGCACTATACCTAAATATCGCT-GTAAACTCTAGGGCTTGTGAGATTGT 419 |||||||| ||||||||| ||||| |||||| | | ||||||||||||||||||||||| Sbjct 361 AGAATGACCGATGCACTAGACCTAGATATCG-TAATCAACTCTAGGGCTTGTGAGATTGT 419 Query 420 CTCCAAAT-TCGGTGGTCACGCTAACACGAAATTACGCAGAGGGAAGAAGCTATACGCTG 478 |||||||| | | ||||||||||||||| |||||||| ||||||||||||||| ||||| Sbjct 420 CTCCAAATAT-GATGGTCACGCTAACACCAAATTACGTAGAGGGAAGAAGCTAAACGCTA 478 Query 479 TTTGTGCAGCCTCTGTTTCAATGGCTTGTCGTGAACTGAAACTGTCGAGGACATTGAAAG 538 | ||||||||||||||||||| |||||||||||||||| |||| |||||||||||||||| Sbjct 479 TATGTGCAGCCTCTGTTTCAACGGCTTGTCGTGAACTGCAACTCTCGAGGACATTGAAAG 538 Query 539 AGATCGCT-ATGGTTGCCAACGGTGTTGA-ATTGAAGGATATCCGCAAATCGAGTATGGT 596 |||||||| | ||||||||| ||||| || | |||||||||||| ||| |||| |||| Sbjct 539 AGATCGCTGA-GGTTGCCAATGGTGTGGACA-AGAAGGATATCCGGAAAGAGAGTCTGGT 596 Query 597 GATAAAGCGTGTTCTTGAATCAGATCAAGCCTCCGTGTCTGCTGCTCAAGCGATTATCAA 656 |||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||| Sbjct 597 GATAAAGCGTGTTCTTGAGTCACATCAAACCTCCGTGTCTGCTTCTCAAGCGATTATCAA 656 Query 657 CACCGGAGAACTCGTTCGCCGGTTCTGTTCCAAACTTGATATAAGTCAAAGAGAGATAAT 716 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 657 CACCGGAGAACTCGTTCGCCGGTTCTGTTCCAAACTTGATATAAGTCAAAGAGAGATAAT 716 Query 717 GGCGATTCGAGAAGCTGTCGAAAAAGCTGAGAATTTCGATATCCGAAGAAACCCTAAGTC 776 |||||||| |||||| || || ||||| ||||||||||||||||| |||||||||||||| Sbjct 717 GGCGATTCCAGAAGCGGTTGAGAAAGCAGAGAATTTCGATATCCGGAGAAACCCTAAGTC 776 Query 777 AGTTCTTGCGGCAATTATCTTCATGATCTCTCATATATCTCAGACCAACAGGAGACCTAT 836 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 777 AGTTCTTGCAGCAATTATCTTCATGATCTCTCATATATCTCAGACCAACAGGAAACCTAT 836 Query 837 TCGAGAAATTGGGATCGTTGCGGAAGTAGTGGAGAATACAATCAAGAACTCGGTTAAAGA 896 | |||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 837 TAGAGAAATTGGCATCGTTGCGGAAGTTGTGGAGAATACGATCAAGAACTCGGTTAAAGA 896 Query 897 TATGTACCCTTACGCCTTGAAGATTATACCTAACTGGTATGCTTGTGAAGCAGAGATTAT 956 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || || Sbjct 897 TATGTACCCGTACGCCTTGAAGATTATACCTAACTGGTATGCTTGTGAATCAGACATCAT 956 Query 957 CAAGAGGTTAGATGGTGTCATAACTTCTTGGGATTCAGCAAAAAATTCAGTATAA 1011 ||| ||||||||||||||||| || || |||||||| |||||| |||||||||| Sbjct 957 CAAAAGGTTAGATGGTGTCATCACGTCCTGGGATTCTGCAAAATTTTCAGTATAA 1011 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49530868942 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5