BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg323016 Length=1011 Score E Sequences producing significant alignments: (Bits) Value AT3G29380.1 | Symbols: | Cyclin-like family protein | chr3:112... 1363 0.0 > AT3G29380.1 | Symbols: | Cyclin-like family protein | chr3:11282407-11283524 REVERSE LENGTH=1011 Length=1011 Score = 1363 bits (738), Expect = 0.0 Identities = 925/1016 (91%), Gaps = 10/1016 (1%) Strand=Plus/Plus Query 1 ATGGAGGAAGAGACTTGCTTGGACTGCAAGAGACCGACCATAACGGTGATTGATCACAGT 60 ||||| |||||||| |||||||||||||||||||| ||||||| |||| ||||||||||| Sbjct 1 ATGGAAGAAGAGACCTGCTTGGACTGCAAGAGACCAACCATAATGGTGGTTGATCACAGT 60 Query 61 AGCGGCGACACCATCTGCTCAGAGTGTGGCCTTGTCCTCGAAGCTCACATCATCGAATAC 120 ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGCGGTGACACCATCTGTTCGGAGTGTGGCCTTGTCCTCGAAGCTCACATCATCGAATAC 120 Query 121 TCTGAGGAATGGAGAACTTTCGCCTCCGACGACAATCGCAGTGACAGAGACCCAAACCGT 180 ||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 121 TCTCAGGAATGGAGAACTTTCGCATCCGACGACAATCACAGTGACAGAGACCCAAACCGT 180 Query 181 GTTGGTGCTCCAACGAACCCTCTTCTCAAATCCGGTGATCTCGTCACCGTCATCGAGAAA 240 ||||||||| | || |||||| |||||||||| || ||||| |||||| ||||||||||| Sbjct 181 GTTGGTGCTGCGACAAACCCTTTTCTCAAATCAGGCGATCTTGTCACCATCATCGAGAAA 240 Query 241 CCTAAGGAAAACATTTCTTCTGTTGTGTCCAAAGATGATC-TCTCTACTTTGTGCCGTGC 299 ||||| |||| | ||| |||||| ||||||||||||| | |||| ||||||| |||||| Sbjct 241 CCTAAAGAAACCGCTTCCTCTGTTCTGTCCAAAGATGA-CATCTCCACTTTGTTCCGTGC 299 Query 300 GCAGAATCAACTCAAGAACCATGAAGAAGATCTAATCAAGAAAGCATTCGAGGAAATACA 359 || |||||| ||||||||||||||||||| ||||||||| |||| ||||| |||||||| Sbjct 300 ACATAATCAAGTCAAGAACCATGAAGAAGACCTAATCAAGCAAGCCTTCGAAGAAATACA 359 Query 360 GAGAATAACTGATGCACTATACCTAGATATCGTTGTAC-ACTCTAGGGCTTGTGAGATTG 418 |||||| || ||||||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct 360 GAGAATGACCGATGCACTAGACCTAGATATCGTAAT-CAACTCTAGGGCTTGTGAGATTG 418 Query 419 TCTCCAAAT-TCGGTGGTCACGCTAACACGAAATTACGCAGAGGGAAGACGCTATACGCT 477 ||||||||| | | ||||||||||||||| |||||||| |||||||||| |||| ||||| Sbjct 419 TCTCCAAATAT-GATGGTCACGCTAACACCAAATTACGTAGAGGGAAGAAGCTAAACGCT 477 Query 478 GTTTGTGCAGCCTCTGTTTCAATGGCTTGTCGTGAACTGAAACTGTCGAGGACATTGAAA 537 | ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||| Sbjct 478 ATATGTGCAGCCTCTGTTTCAACGGCTTGTCGTGAACTGCAACTCTCGAGGACATTGAAA 537 Query 538 GAGATCGCT-ATGGTTGCCAACGGTGTTGA-ATTGAAGGATATCCGCAAATCGAGTATGG 595 ||||||||| | ||||||||| ||||| || | |||||||||||| ||| |||| ||| Sbjct 538 GAGATCGCTGA-GGTTGCCAATGGTGTGGACA-AGAAGGATATCCGGAAAGAGAGTCTGG 595 Query 596 TGATAAAGCGTGTTCTTGAATCAGATCAAGCCTCCGTGTCTGCTGCTCAAGCGATTATCA 655 ||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| Sbjct 596 TGATAAAGCGTGTTCTTGAGTCACATCAAACCTCCGTGTCTGCTTCTCAAGCGATTATCA 655 Query 656 ACACCGGAGAACTCGTTCGCCGGTTCTGTTCCAAACTTGATATAAGTCAAAGAGAGATAA 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 656 ACACCGGAGAACTCGTTCGCCGGTTCTGTTCCAAACTTGATATAAGTCAAAGAGAGATAA 715 Query 716 TGGCGATTCGAGAAGCTGTCGAAAAAGCTGAGAATTTCGATATCCGAAGAAACCCTAAGT 775 ||||||||| |||||| || || ||||| ||||||||||||||||| ||||||||||||| Sbjct 716 TGGCGATTCCAGAAGCGGTTGAGAAAGCAGAGAATTTCGATATCCGGAGAAACCCTAAGT 775 Query 776 CAGTTCTTGCGGCAATTATCTTCATGATCTCTCATATATCTCAGACCAACAGGAGACCTA 835 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 776 CAGTTCTTGCAGCAATTATCTTCATGATCTCTCATATATCTCAGACCAACAGGAAACCTA 835 Query 836 TTCGAGAAATTGGAATCGTTGCGGAAGTCGTGGAGAATACAATCAAGAACTCGGTTAAAG 895 || |||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 836 TTAGAGAAATTGGCATCGTTGCGGAAGTTGTGGAGAATACGATCAAGAACTCGGTTAAAG 895 Query 896 ATATGTACCCTTACGCCTTGAAGATTATACCTAACTGGTATGCTTGTGAATCAGACATTA 955 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 896 ATATGTACCCGTACGCCTTGAAGATTATACCTAACTGGTATGCTTGTGAATCAGACATCA 955 Query 956 TCAAGAGATTAGATGGTGTCATAACTTCTTGGGATTCTGCAAAAATTACAGTATAA 1011 |||| || |||||||||||||| || || ||||||||||||||| || |||||||| Sbjct 956 TCAAAAGGTTAGATGGTGTCATCACGTCCTGGGATTCTGCAAAATTTTCAGTATAA 1011 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49530868942 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5