BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323079
Length=2829
Score E
Sequences producing significant alignments: (Bits) Value
AT3G43210.1 | Symbols: TES, ATNACK2, NACK2 | ATP binding microt... 4471 0.0
> AT3G43210.1 | Symbols: TES, ATNACK2, NACK2 | ATP binding microtubule
motor family protein | chr3:15190934-15196168 FORWARD
LENGTH=3193
Length=3193
Score = 4471 bits (2421), Expect = 0.0
Identities = 2697/2831 (95%), Gaps = 16/2831 (1%)
Strand=Plus/Plus
Query 1 ATGATGGGACCTCCGAGAACACCGTTAAGTAAGGTAGATAGGGTCAATAATCCTTATACT 60
|||||||||||||||||||| |||||||||||| |||||| ||| ||||||||||||
Sbjct 230 ATGATGGGACCTCCGAGAACTCCGTTAAGTAAGATAGATA-AGTC--CAATCCTTATACT 286
Query 61 CCAGGTGGTTCCAAAGTTACAGAGGAGAAGATTCTTGCCACTGTTCGGATGAGACCATTA 120
||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 287 CCATGTGGTTCCAAAGTTACAGAGGAGAAGATTCTTGTCACTGTTCGGATGAGACCATTA 346
Query 121 AACTGGAGGGAACATGCCAAATATGATCTCATTGCATGGGAATGTCCCGATGATCAGACC 180
|| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 347 AATTGGAGGGAACATGCCAAATATGATCTCATTGCTTGGGAATGTCCCGATGATGAGACT 406
Query 181 ATCGTCTTTAAGAATCCCAATCCTGAGAGGGCTGCAACCAAATTTTCATTTGATAAAGTT 240
||||||||||||||||| |||||||| | |||| |||| |||| ||||||||||||||||
Sbjct 407 ATCGTCTTTAAGAATCCGAATCCTGACAAGGCTCCAACAAAATATTCATTTGATAAAGTT 466
Query 241 TTTGAGCCAACTTGTGCAACTCAAGAGGTTTATGAAGGTGGTTCTAGGGACGTCGCACTA 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 467 TTTGAGCCAACTTGTGCAACTCAAGAGGTGTATGAAGGTGGTTCTAGGGACGTTGCACTA 526
Query 301 TCTGCATTAGCAGGAACCAATGCAACTATTTTTGCTTATGGTCAGACTAGCAGTGGCAAG 360
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 527 TCTGCATTAGCAGGAACAAATGCAACTATTTTTGCTTATGGTCAGACTAGTAGTGGCAAG 586
Query 361 ACGTTTACAATGAGGGGAGTTACTGATAGTGTAGTTAAAGATATATACGAGCATATAAGA 420
||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||||
Sbjct 587 ACGTTTACAATGAGGGGGGTTACTGAAAGTGTTGTTAAAGATATATACGAACATATAAGA 646
Query 421 AAAACTCAAGAAAGGAGCTTCGTCTTGAAAGTATCTGCTTTGGAGATCTATAACGAGACT 480
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 647 AAAACTCAAGAAAGGAGCTTTGTCTTGAAAGTATCTGCTTTGGAGATTTATAACGAGACC 706
Query 481 GTGGTTGACCTTTTAAATCGTGATACTGGGCCCCTTGGACTGTTAGATGATCCAGAGAAA 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 707 GTGGTTGACCTTTTAAATCGTGATACTGGGCCCCTTAGACTGTTAGATGATCCAGAGAAA 766
Query 541 GGAACCATTGTGGAAAATCTGGTGGAGGAAGTGGTAGAAAGCAGGCAACACTTACAGCAT 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 767 GGAACCATTGTGGAAAATCTGGTGGAGGAAGTGGTAGAAAGCAGGCAACATTTACAGCAT 826
Query 601 TTAATTAGCATTTGTGAAGATCAAAGGCAAGTAGGTGAAACTGCTTTGAACGACAAAAGT 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 827 TTAATTAGCATTTGTGAAGATCAAAGGCAAGTAGGTGAAACTGCTTTAAACGACAAAAGT 886
Query 661 TCAAGATCGCATCAGATTATTCGGCTGACCATCCAGAGCAGTCTCAGGGAAATAGCTGGC 720
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 887 TCAAGATCGCATCAGATTATTCGGCTGACCATCCATAGCAGTCTCAGGGAAATAGCAGGC 946
Query 721 TGTGTGCAGTCTTTCATGGCAACTCTGAATCTTGTTGATCTTGCTGGAAGCGAACGTGCT 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 TGTGTGCAGTCTTTCATGGCAACTCTGAATCTTGTTGATCTTGCTGGAAGCGAACGTGCT 1006
Query 781 TGTCAAACAAACGCAGATGGCCTAAGATTGAAGGAAGGGAGCCATATTAACCGTAGTTTA 840
| |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct 1007 TTTCAAACAAACGCAGATGGTCTAAGATTGAAGGAAGGAAGCCACATTAACCGTAGTTTA 1066
Query 841 TTGACACTTACTACAGTAATCAGAAAACTGAGTTCTGGAAGAAAAAGTGATCACGTGCCA 900
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1067 TTGACACTTACTACAGTGATCAGAAAACTGAGTTCTGGAAGAAAAAGGGATCACGTGCCG 1126
Query 901 TATAGAGACTCAAAGTTGACAAGGATTTTGCAAAATTCACTTGGCGGGAATGCTAGAACA 960
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1127 TATAGAGACTCAAAGCTGACAAGAATTTTGCAAAATTCACTTGGCGGGAATGCTAGAACA 1186
Query 961 GCAATTATATGTACGATTAGCCCAGCACTCAGCCACGTTGAACAGACCAAAAAGACACTC 1020
|||||||||||||||||||| || ||||| || || ||||||||||| |||||||||||
Sbjct 1187 GCAATTATATGTACGATTAGTCCGGCACTGAGTCATGTTGAACAGACAAAAAAGACACTT 1246
Query 1021 TCTTTTGCCATGAGTGCGAAGGAAGTCACCAACTGCGCTAAAGTGAACATGGTTGTCTCA 1080
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1247 TCTTTTGCCATGAGTGCGAAGGAAGTCACCAATTGCGCTAAAGTAAACATGGTTGTCTCA 1306
Query 1081 GAGAAAAAGTTGCTGAAACATCTGCAGCAAAAAGTAGCCAAACTCGAGTCAGAGTTAAGA 1140
|| |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1307 GAAAAAAAGCTGCTGAAACATCTGCAGCAAAAAGTAGCTAAACTCGAGTCAGAGTTAAGA 1366
Query 1141 AGCCCGGAGTCCAGTTCATCTACCTGCTTAAAGTCTCTGTTAATTGAGAAAGAGATGAAA 1200
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1367 AGCCCGGAGCCCAGTTCATCCACCTGCTTAAAGTCTCTGTTAATTGAGAAAGAGATGAAA 1426
Query 1201 ATCCAACAGATGGAATCCGAAATGAAAGAGCTAAAGCGTCAGAGAGACATTGCACAATCT 1260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1427 ATCCAACAGATGGAATCCGAAATGAAAGAGCTAAAGCGTCAGAGAGACATTGCACAGTCT 1486
Query 1261 GAGCTTGATCTAGAAAGAAAAGCAAAGGAGCTGAAGGGGTCAAGTGAGTGTGAACCTTTT 1320
|| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 1487 GAACTTGATCTAGAAAGAAAAGCAAAGGAGCGGAAGGGATCAAGTGAGTGTGAACCTTTT 1546
Query 1321 TCTCAAGTGGCAAGGTGTCTCTCCTACCAAACTGAGGAGGAGTCCATTCCAAGCAAATCT 1380
||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||||
Sbjct 1547 TCTCAAGTGGCAAGGTGTCTCTCATACCATACAAAGGAGGAATCCATTCCAAGCAAATCT 1606
Query 1381 GTTCCGTCAAGCCGCAGAACAACTCGTGGTAGGAGAAAGGATAATGTGAGGCAGTCTTTA 1440
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 1607 GTTCCGTCAAGCCGCAGAACAGCTCGTGATAGGAGAAAGGATAATGTGAGGCAGTCTTTA 1666
Query 1441 ACTTCAGCGGATCCAACAGC-CTTAGTCCAAGAAATTCGTTTGCTTGAAAAACATCAAAA 1499
||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 1667 ACTTCGGCGGATCCAACAGCGCT-AGTCCAAGAAATTCGTTTGCTTGAAAAACATCAAAA 1725
Query 1500 GAAGTTGGGTGAGGAAGCAAACCAAGCACTGGAGCTAATTCATAAAGAAGTGACATCCCA 1559
|||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1726 GAAGTTGGGTGAAGAAGCAAACCAAGCACTGGATCTAATTCACAAAGAAGTGACATCCCA 1785
Query 1560 TAAACTGGGTGATCAACAAGCTGCAGAAAAAGTTGCGAAAATGCTGTCAGAAATCCGAGA 1619
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1786 TAAACTGGGTGATCAACAAGCTGCAGAAAAAGTTGCGAAAATGCTGTCAGAAATCAGGGA 1845
Query 1620 CATGCAGAAGAGCAACCTTTTAACCGAGGAAATTGTAGTTGGTGATAAAGCTAACTTGAA 1679
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||
Sbjct 1846 CATGCAGAAGAGCAACCTTTTAACTGAGGAAATTGTAGTTGGTGATAAAGCCAACCTGAA 1905
Query 1680 GGAAGAAATAACCCGGTTGAATTCTCAAGAAATTGCAGCTTTGGAGAAGAAGCTTGAGTG 1739
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1906 GGAAGAAATAAATCGGTTGAATTCTCAAGAAATTGCAGCTTTGGAGAAGAAGCTAGAGTG 1965
Query 1740 TGTTCAGAACACTATTGACATGCTTGTCTCGTCTTTTCAGACAGAGGAACAACAGACTCC 1799
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1966 TGTTCAGAACACTATTGACATGCTTGTCTCGTCTTTTCAGACAGATGAACA---GACTCC 2022
Query 1800 AGATTTCAGGACCCAGGTGAAAAAGAAGAGAGTTCTTCCCTTCGGCTTAAGTAATAGTCC 1859
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2023 AGATTTCAGGACCCAGGTGAAAAAGAAGAGACTTCTTCCCTTCGGCTTAAGTAATAGTCC 2082
Query 1860 TAACATACAGCATATGATCCGGGCACCATGTTCACCTCTTTCGTCTTCTGGGACTGAAAA 1919
|||| |||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct 2083 TAACCTACAGCATATGATCCGGGGACCATGTTCACCTCTTTC-T-----GGGACTGAAAA 2136
Query 1920 TAAGGCTCCTGAGAGCAATGTTGTGTCTACTAATTCAGCCCCTGTTTCTTTTGGAGCTAC 1979
||||| |||||||||||||||||||||| ||||||||||||| || ||||||||||||||
Sbjct 2137 TAAGGATCCTGAGAGCAATGTTGTGTCTGCTAATTCAGCCCCAGTGTCTTTTGGAGCTAC 2196
Query 1980 TCCACCAAAGAGGGATGATAACCGCA-GTCGAACACCGTCAAGGGAAGGAACGCCTGTAT 2038
|||||||||||||||||||||||| | |||| |||| |||||||||||||||||||||||
Sbjct 2197 TCCACCAAAGAGGGATGATAACCG-ATGTCGTACACAGTCAAGGGAAGGAACGCCTGTAT 2255
Query 2039 CACGACAAGCAAACTCAGTTGATGTTAAGAGAATGAAGCGCATGTTTAAGAATGCTGCCG 2098
||||||||||||| ||||| ||| ||||||||||||| || |||| ||||||||||||||
Sbjct 2256 CACGACAAGCAAATTCAGTCGATATTAAGAGAATGAATCGAATGTATAAGAATGCTGCCG 2315
Query 2099 AAGAAAATATACGTAACATCAAAGCTTATGTTACTGGATTGAAAGAACGTGTGGCGAAGC 2158
|||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2316 AAGAGAATATACGTAATATCAAATCTTATGTTACTGGATTGAAAGAACGTGTGGCGAAGC 2375
Query 2159 TTCAATACCAGAAGCAGCTTCTTGTTTGCCAGGTGTTAGAACTGGAGGCAAACGAGACAG 2218
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2376 TTCAATACCAGAAGCAGCTGCTTGTTTGCCAGGTGTTAGAACTGGAGGCAAACGAGACAG 2435
Query 2219 GTGCTGCTTCAGAGTCCGATGCAACCGATGAATCTCAGATGGATTGGCCCTTGTGTTTTG 2278
| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2436 GCGCTGCTTCGGAGTACGATGCAACCGATGAATCTCAGATGGATTGGCCATTGTGTTTTG 2495
Query 2279 AAGAGCAGAGAAAGCAAATCATAATGTTATGGCATCTGTGCCACATTTCAATCATTCACA 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2496 AAGAGCAGAGAAAGCAAATCATAATGTTATGGCATCTGTGCCACATTTCAATCATTCACA 2555
Query 2339 GGACACAATTCTACATGTTATTCAAAGGAGACCCAGCTGATCAAATCTACATGGAAGTTG 2398
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2556 GAACACAATTCTACATGTTATTCAAAGGAGACCCAGCTGATCAAATCTACATGGAGGTTG 2615
Query 2399 AGCTCCGCAGGCTGACATGGCTCGAACAGCACTTGGCCGAGCTTGGGAATGCGAGTCCTG 2458
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2616 AGCTCCGCAGGCTGACATGGCTCGAACAGCACTTGGCTGAGCTTGGGAATGCGAGTCCTG 2675
Query 2459 CATTGCTTGGTGATGAACCAGCAAGCTACGTAGCATCAAGTATTAGAGCTTTGAAGCAGG 2518
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 2676 CATTGCTTGGTGATGAACCAGCAAGCTACGTAGCATCGAGTATAAGAGCTTTGAAGCAGG 2735
Query 2519 AGAGAGAGTATTTGGCGAAACGGGTAAACACAAAGCTAGGAGCGGAGGAAAGAGAGATGC 2578
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2736 AGAGAGAGTATTTGGCGAAACGGGTAAACACAAAGCTAGGAGCAGAGGAAAGAGAGATGC 2795
Query 2579 TGTACCTGAAATGGGATGTCCCGCCGGTGGGAAAACAGAGGAGGCAACAGTTCATCAACA 2638
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2796 TATACCTGAAATGGGATGTCCCGCCGGTGGGAAAACAGAGGAGACAACAGTTCATCAACA 2855
Query 2639 AACTCTGGACAGATCCTCACAACATGCAGCACGTGAGAGAGAGCGCAGAGATCGTGGCTA 2698
|||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||
Sbjct 2856 AACTCTGGACAGATCCTCACAACATGCAACACGTGAGAGAGAGTGCGGAGATCGTGGCTA 2915
Query 2699 AGCTTGTCGGATTCTGTGACTCGGGAGAGAACATAAGAAAAGAAATGTTTGAGCTCAACT 2758
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2916 AGCTTGTCGGATTCTGTGACTCGGGAGAGACCATAAGGAAAGAAATGTTTGAGCTCAACT 2975
Query 2759 TTGCGTCTCCTTCAGATAAGAAGACATGGATGATGGGTTGGAACTTCATATCAAACTTGT 2818
|||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 2976 TTGCATCTCCTTCAGATAAGAAGACTTGGATGATGGGTTGGAACTTCATATCCAACTTGT 3035
Query 2819 TGCATCTCTAG 2829
|||||||||||
Sbjct 3036 TGCATCTCTAG 3046
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140567774286
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5