BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323159
Length=2022
Score E
Sequences producing significant alignments: (Bits) Value
AT1G29880.1 | Symbols: | glycyl-tRNA synthetase / glycine--tRN... 2089 0.0
AT1G29870.1 | Symbols: | tRNA synthetase class II (G, H, P and... 893 0.0
AT3G44740.1 | Symbols: | Class II aaRS and biotin synthetases ... 891 0.0
> AT1G29880.1 | Symbols: | glycyl-tRNA synthetase / glycine--tRNA
ligase | chr1:10459478-10462801 REVERSE LENGTH=2394
Length=2394
Score = 2089 bits (1131), Expect = 0.0
Identities = 1468/1630 (90%), Gaps = 25/1630 (2%)
Strand=Plus/Plus
Query 8 CTCTTCGTGAATCGT-TATCGGAGAAATCTTCCTCCGTCGAAGCTCAAGGG-AATGTCGT 65
|||| ||| |||| | | || |||||||| || ||||||||||||| |||| || | |||
Sbjct 157 CTCTCCGTCAATC-TCTTTCCGAGAAATCCTCATCCGTCGAAGCTC-AGGGTAACGCCGT 214
Query 66 CAGAGCTCTCAAGGCTTCACAAGCAGCGAAGCCGGAGATCGATGCTGCTATTGAGCTGCT 125
| |||||||||||||||| | ||||| || || || ||||||||||| ||||||| ||
Sbjct 215 CCGAGCTCTCAAGGCTTCCCGTGCAGCTAAACCAGAAATCGATGCTGCCATTGAGCAACT 274
Query 126 CAATAAATTGAAGCTTGAGAAATCCGCCGTTGAGAAGCAGCTTCAAG-C----A--AGTA 178
||| ||||||||||| |||||||| |||| |||||| |||||| || | | ||||
Sbjct 275 CAACAAATTGAAGCTCGAGAAATCTACCGTCGAGAAGGAGCTTC-AGTCTATTATCAGTA 333
Query 179 --T-CGGAAATGGTTCACATAACCGTGAAGCTTTTCGACAAA-ATGTTGTTAATACTCTT 234
| ||| |||||||| | ||||||||| ||||||||| ||| |||||| ||||||||
Sbjct 334 GCTCCGGTAATGGTTCGCTTAACCGTGAGGCTTTTCGA-AAAGCTGTTGTCAATACTCTC 392
Query 235 GAGCGGCGTTTGTTCTATATTCCTTCATTCAAAATCTACGGTGGCGTCGCTGGACTTTTC 294
|||||||||||||||||||| ||||| || || |||||| |||||||||||||||||||
Sbjct 393 GAGCGGCGTTTGTTCTATATCCCTTCGTTTAAGATCTACAGTGGCGTCGCTGGACTTTTT 452
Query 295 GATTATGGTCCTCCTGGTTGTGCTGTTAAATCCAATGTTCTTAGCTTCTGGCGTCAACAT 354
||||||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||
Sbjct 453 GATTATGGTCCTCCTGGCTGTGCTATTAAATCCAATGTTCTCAGCTTTTGGCGTCAACAT 512
Query 355 TTCATTCTTGAGGAGAATATGCTAGAAGTGGATTGTCCATGTGTGACACCAGAGATTGTT 414
||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||
Sbjct 513 TTCATTCTTGAGGAGAACATGCTAGAAGTTGATTGTCCATGTGTGACACCAGAGGTTGTT 572
Query 415 CTCAAGGCATCTGGACATGTAGATAAGTTTACTGATCTTATGGTTAAGGATGAGAAAACT 474
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 573 CTCAAGGCATCTGGGCATGTAGATAAGTTCACTGATCTTATGGTTAAGGATGAGAAAACT 632
Query 475 GGGACTTGTTACCGTGCGGATCACTTGCTTAAGGATTATTGTAACGAGAAGTTAGAGAAA 534
|| || ||||||||||| || |||||||| ||||||||||||| ||||||| | ||||||
Sbjct 633 GGAACATGTTACCGTGCTGACCACTTGCTCAAGGATTATTGTACCGAGAAGCTGGAGAAA 692
Query 535 GATCTTACTATCTCGGGTGAGAAAGCTGCTGAATTGAAGGATGTTCTTGCTGTCATGGAA 594
|||||||| ||||| | |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 693 GATCTTACCATCTCTGCTGAGAAAGCTGCTGAATTGAAGGATGTTCTTGCTGTTATGGAA 752
Query 595 GATTTTTCTAGTGAACAGCTTGGTGCTAAGATTAAGGAGTATGGGATTACTGCTCCAGAC 654
||||||||| ||||||||| ||||| ||||| | |||||||||||| ||||||||||||
Sbjct 753 GATTTTTCTCCTGAACAGCTAGGTGCCAAGATCAGGGAGTATGGGATCACTGCTCCAGAC 812
Query 655 ACGAAGAACCCTCTCTCTGATCCTTATCCGTTTAACTTGATGTTTCAAACATCCATTGGT 714
|||||||| || |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 813 ACGAAGAATCCACTCTCTGATCCTTACCCGTTTAATTTGATGTTTCAAACATCCATTGGC 872
Query 715 CCATCTGGTTCGAGTCCCGGTTACATGCGGCCTGAAACTGCACAGGGCATTTTTGTGAAC 774
|||||||||| || ||| ||||||||||| ||||||||||| || || |||||||| |||
Sbjct 873 CCATCTGGTTTGATTCCTGGTTACATGCGTCCTGAAACTGCTCAAGGTATTTTTGTCAAC 932
Query 775 TTTAAGGACTTGTATTACTACAATGGG-AGAAAACTTCCCTTTGCTGCTGCTCAAATTGG 833
|||||||||||||| || ||||||||| || |||||||| ||||| || |||||||||||
Sbjct 933 TTTAAGGACTTGTACTATTACAATGGGAAG-AAACTTCCTTTTGCCGCGGCTCAAATTGG 991
Query 834 TCAGGCCTTTAGAAATGAGATATCTCCTCGTCAAGGGCTTCTTAGAGTTCGTGAATTCAC 893
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 992 TCAAGCCTTTAGAAATGAGATATCTCCTCGACAAGGGCTTCTTAGAGTTCGTGAATTCAC 1051
Query 894 TCTGGCAGAAATTGAGCATTTTGTTGATCCTGAGAATAAGTCACAT-CTGAAATTCTCTG 952
|||||||| |||||||| || |||||||||||||||||||||||| || || |||||||
Sbjct 1052 GCTGGCAGAGATTGAGCACTTCGTTGATCCTGAGAATAAGTCACATCCT-AAGTTCTCTG 1110
Query 953 AGGTAGCAAAATTGGAATTCCTGATGTTTCCAAGAGAGGAACAAATGTCTGGCCAATCTG 1012
| |||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||||
Sbjct 1111 ACGTAGCAAAATTGGAATTCCTTATGTTCCCAAGGGAAGAACAAATGTCTGGCCAATCTG 1170
Query 1013 CCAAAAAATTTTGCCTTGGCGAAGCTGTTGCCAAGGGAACTGTGAACAATGAAACTCTAG 1072
|||||||| |||||||||| ||||||||||| || || ||||||||||||||||||||||
Sbjct 1171 CCAAAAAACTTTGCCTTGGTGAAGCTGTTGCTAAAGGTACTGTGAACAATGAAACTCTAG 1230
Query 1073 GCTACTTCATTGGGAGAGTGTATCTTTTCCTTGTC-CGTCTTGGCATAGACAAGGAACGG 1131
| |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||
Sbjct 1231 GATACTTCATTGGGAGAGTGTATCTTTTCCTT-ACTCGTCTTGGCATTGACAAGGAACGG 1289
Query 1132 TTGCGTTTCCGCCAGCATCTAGCAAATGAAATGGCCCACTATGCTGCAGATTGTTGGGAT 1191
|||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1290 CTGCGCTTCCGTCAGCATCTAGCAAATGAAATGGCCCACTATGCAGCAGATTGTTGGGAT 1349
Query 1192 GCTGAAATTGAGAGTTCATATGGGTGGATTGAATGTGTTGGGATTGCAGATAGGTCTGCG 1251
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1350 GCTGAAATTGAAAGTTCATATGGGTGGATTGAATGTGTTGGGATTGCAGATAGGTCTGC- 1408
Query 1252 TTT-GACTTATGTGCCCACTCAGAAAAAAGTGGCGTTCCTCTTGTGGCTGAAGAGAAACT 1310
|| |||||| |||| ||||| || |||||||| |||||||||||||||||||||| |
Sbjct 1409 TTACGACTTACGTGCTCACTCTGACAAAAGTGGTACTCCTCTTGTGGCTGAAGAGAAATT 1468
Query 1311 TGCAGAACCTAAAGAAGTAGAGAAACTTGTGATTACTCCTGTGAAGAAAGAACTTGGTCT 1370
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1469 TGCAGAACCTAAAGAAGTAGAGAAACTTGTGATAACTCCTGTGAAGAAAGAACTGGGTCT 1528
Query 1371 TGCATTCAAGGGAAATCAAAAGAATGTGGTTGAATCTTTAGAGGCGATGAATGAAGAAGA 1430
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1529 TGCATTCAAGGGAAATCAAAAGAATGTGGTTGAATCTTTGGAGGCGATGAATGAGGAAGA 1588
Query 1431 AGCTATGCAGATGAAAGCAACTCTGGAATCCAAAGGGGAAGTAGAGTTTTACGTATGTAC 1490
||||||| ||||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct 1589 AGCTATGGAGATGAAAGCAACCCTGGAATCCAAAGGGGAAGTGGAGTTTTACGTGTGTAC 1648
Query 1491 CCTAGAGAAAAACGTGAGCATCAAGAAGAATATGGTGTCAATCTCAAAGAAGAAAAAGAA 1550
|||| |||||| ||||| ||||||||| || |||||||| || |||||| |||| |||||
Sbjct 1649 CCTAAAGAAAAGCGTGAACATCAAGAAAAACATGGTGTCTATATCAAAGGAGAAGAAGAA 1708
Query 1551 AGAGCACCAGCGGGTTTTCACTCCTTCAGTGATTGAACCATCATTTGGGATTGGTCGGAT 1610
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1709 AGAGCACCAGCGGGTTTTCACTCCATCAGTGATTGAACCATCGTTTGGGATTGGTCGGAT 1768
Query 1611 CATATATTGT 1620
||||||||||
Sbjct 1769 CATATATTGT 1778
Score = 582 bits (315), Expect = 4e-165
Identities = 372/400 (93%), Gaps = 2/400 (1%)
Strand=Plus/Plus
Query 1623 CAAAACAGGTGATGAACAGTTGAA-TGTGTTCCGTTTCCCTCCTCTTGTAGCACCCATCA 1681
|||| |||| ||||| |||||||| | ||||||||||||||||||||||||| |||||||
Sbjct 1811 CAAAGCAGGGGATGAGCAGTTGAACT-TGTTCCGTTTCCCTCCTCTTGTAGCTCCCATCA 1869
Query 1682 AGTGCACGGTTTTCCCGCTTGTTCAGAACCAACAATTCGAGGAAGCAGCCAAAGTTATTT 1741
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1870 AGTGCACGGTTTTCCCGCTTGTTCAGAACCAACAATTCGAGGAAGTAGCCAAAGTTATTT 1929
Query 1742 CGAAGGAACTCGCTTCTGTTGGCATCTCACATAAGATTGACATCACTGGTACATCGATAG 1801
| ||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||
Sbjct 1930 CCAAGGAACTCGCCTCTGTCGGTATCTCCCATAAGATTGACATCACTGGTACATCGATAG 1989
Query 1802 GGAAGAGATATGCGAGAACCGATGAGCTTGGAGTGCCATTGGCAATAACAGTGGACTCGG 1861
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1990 GGAAGAGATATGCGAGAACCGATGAGCTTGGAGTGCCATTTGCAATAACAGTGGACTCGG 2049
Query 1862 ACACATCAGTGACAATCAGAGAAAGAGACAGCAAAGACCAAGTTCGAGTCAGCTTAAAGG 1921
| ||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| ||||
Sbjct 2050 ATACATCAGTGACAATCAGAGAAAGAGACAGCAAAGATCAAGTCCGAGTCACCTTGAAGG 2109
Query 1922 AGGCAGCTTCCGTGGTTAGCTCAGTCGCAGAGGGGAAGATGACGTGGCAAGACGTCTGGG 1981
||||||||||||| || ||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 2110 AGGCAGCTTCCGTTGTGAGCTCAGTCTCAGAGGGGAAAATGACGTGGCAAGACGTCTGGG 2169
Query 1982 CTAGTTTCCCTCACCACTCTTCTGCTGCTGTAGATGAGTA 2021
| | ||||||||||| ||||||||||||| ||| |||||
Sbjct 2170 CAACCTTCCCTCACCATTCTTCTGCTGCTGCAGACGAGTA 2209
> AT1G29870.1 | Symbols: | tRNA synthetase class II (G, H, P and
S) family protein | chr1:10456902-10458782 REVERSE LENGTH=1392
Length=1392
Score = 893 bits (483), Expect = 0.0
Identities = 1006/1251 (80%), Gaps = 66/1251 (5%)
Strand=Plus/Plus
Query 197 ACCGTGAAGCTTTTCGACAA-AATGTTGTTAATACTCTTGAGCGGCGTTTGTTC-TATAT 254
||||||| | |||||| || | || || || ||||| || |||| ||||||| | |
Sbjct 167 ACCGTGAGGATTTTCGGGAAGCA-GTGGTCAAAACTCTCGATCGGCTTTTGTTCGTCCA- 224
Query 255 TCCTTCATTCAAAATCTACGGTGGCGTCGCTGGACTTTTCGATTAT-GGTCCTCCTGGTT 313
| || ||| | |||||| ||||||||||||||||| ||||| | ||||||| ||||
Sbjct 225 TAAATCTTTCGATATCTACCATGGCGTCGCTGGACTTTACGATT-TCGGTCCTCATGGTC 283
Query 314 GTGCTGTT-AAATCCAATGTTCTTAGCTTCTGGCGTCAA-CATTTCATTCTTGAGGAGAA 371
|| ||||| || | ||| | |||||| |||||||| || ||| || ||| ||| |
Sbjct 284 GTACTGTTGAACT-TAATATACTTAGCCTCTGGCGT-AAGTGTTTTGTTGATGAAGAGGA 341
Query 372 TATGCTAGAAGTGGATTGTCCATG-TGTGACACCAGAGATTGTTCTCAAGGCATCTGGAC 430
||| | || || | |||| || | | ||||||||||| ||| |||| |||||||| |
Sbjct 342 CATGATGGAGGTTGCTTGTACA-GCTTTGACACCAGAGGCCGTTTTCAACGCATCTGGGC 400
Query 431 ATGTAGATAAGTTTACTGATCTTATGGTTAAGGATGA-GAAAACTGGGA-C-TTGTTACC 487
||||| | ||||| |||||||||||||| |||||||| | | | | ||| | || | |||
Sbjct 401 ATGTAAAAAAGTTCACTGATCTTATGGTCAAGGATGAGGTAGA-T-GGAGCATT-TCACC 457
Query 488 GTGCGGATCACTTGCT-TAAGGATTATTGTAACGAGAAGTTAGAGAAAGATCTTACTATC 546
||||||| |||||| | || | ||||||| || || | ||||||||| ||| |||
Sbjct 458 GTGCGGACCACTTGGTCAAAAG-TTATTGT---GAAAACCGAAAGAAAGATCCTACCATC 513
Query 547 TCGGGTGAGAAAGCTGCTGAATTGAAGGATGTTCTTGCTGTCA--TGGAAGATTTTTCTA 604
|| | |||||| |||||||||||| | | ||| | || ||| |||||||| |||||
Sbjct 514 TCTGCTGAGAATGCTGCTGAATTGGATAAAGTTATAGC--TCATGTGGAAGATCTTTCT- 570
Query 605 G-TGAACAGCTTGGTGCTAAGATTAAGGAGT-ATGGGAT-TACTGCTCCAGACACGAAGA 661
| |||| ||||||||| || || ||| | | | | || ||||||| ||||||||
Sbjct 571 GCTGAAGAGCTTGGTG----GAGTATGGAATCA-CTGCTCCACAGCTCCAGTCACGAAGA 625
Query 662 A-CC-CTCTCTC-TGATCCTTATCCGTTTAACTTGATGTTTCAAACATCCATTGGTCCAT 718
| || || |||| | |||| || || ||||||||||||||||| ||| |||| ||
Sbjct 626 ATCCACTTTCTCATCCTCCTCGCCCCTTCAACTTGATGTTTCAAACTTCCTTTGGAGCAA 685
Query 719 CTGGTTCGAGT-CCCGGTTACATGCGGCCTGAAACTGCACAGGGCA-TTTTTGTGAACTT 776
||||||| | |||||| |||| ||||||||||| || |||| |||||| |||||
Sbjct 686 GTGGTTCG-TTGATAGGTTACTTGCGTCCTGAAACTGCTCAAGGCAGTTTTTG-CAACTT 743
Query 777 TAAGGACTT-GTATTACTACAATGGGAGAAAACTTCCCTTTGCTGCT-GCTCAAATTGGT 834
||||| || ||| | | ||||||||||||||||| ||||| | | |||||| |||||
Sbjct 744 CAAGGA-TTATTATAATTTGAATGGGAGAAAACTTCCGTTTGCCG-TGGCTCAAGTTGGT 801
Query 835 CAG-GCCTTTAGAAATGAGATATCTCCTCGTCAAGGGCTTCTTAGAGTTCGTGAATTCAC 893
| | | |||||| |||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct 802 C-GAGTCTTTAGGAATGAGATATCTCCACGTCAAGGGCTTCTTAGAACTCGTGAATTCAC 860
Query 894 TCTGGCAGAAATTGAGCATTTTGTTGATCCTGAGAATAAGTCACA-TCTGAAATTCTCTG 952
|||||||||||||||||| |||||| | |||||| |||||||||| ||| || |||||||
Sbjct 861 TCTGGCAGAAATTGAGCACTTTGTTCACCCTGAGCATAAGTCACATTCT-AAGTTCTCTG 919
Query 953 AGGTAGCAAAA-TTGGAATTCCTGATGTTTCCAAGAGAGGAAC---AAATGTCTGGCCAA 1008
| ||||||||| || ||| |||| |||||||||||||| |||| ||| ||||||||
Sbjct 920 ATGTAGCAAAACTT-GAACTCCTTATGTTTCCAAGAGAAGAACAAGAAAAACCTGGCCAA 978
Query 1009 TCTGCCAAAAA-ATTTTGCCTTGGCGAAGCTGTTGCCAA-GGGAACTGTGAACAATGAAA 1066
| || |||||| | |||||||||||||||||||||| || ||| | |||||||| ||| |
Sbjct 979 TTTG-CAAAAAGACTTTGCCTTGGCGAAGCTGTTGCTAAGGGGCA-TGTGAACAGTGAGA 1036
Query 1067 CTCTAGGCTACTTCATTGGGAGAGTGTATCTTTTCCTTGTCCGTCTTGGCATAGACAAGG 1126
||||||| | |||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1037 CTCTAGGATTCTTCATTGGGAGAGTGTATCTTTTCCTTATCCGTCTTGGAATAGACAAGG 1096
Query 1127 AACGGTTGCGTTTCCGCCAGCATCTAGCAAATGAAATGGCCCACTATGCTGCAGATTGTT 1186
|||| |||| ||||| || ||||| |||||||||||||| |||||||| | |||||||
Sbjct 1097 AACGCCTGCGCTTCCGTCATCATCTTGCAAATGAAATGGCACACTATGCAACCGATTGTT 1156
Query 1187 GGGATGCTGAAATTGAGAGTTCATATGGGTGGATTGAATGTGTTGGGATTGCAGATAGGT 1246
||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1157 GGGATGCTGAAATTGAGTGTTCATATGGTTGGATTGAATGTGTTGGAATTGCAGATAGGT 1216
Query 1247 CTGCGTT-TGACTTATGTGCCCACTCAGAAAAAAGTGGCGTTCCTCTTGTGGCTGAAGAG 1305
||| || |||||| |||| ||||| |||||||||||| | ||||||||||| |||||
Sbjct 1217 CTG-ATTACGACTTACGTGCTCACTCCGAAAAAAGTGGCCATGCTCTTGTGGCTCAAGAG 1275
Query 1306 AAACTTGCAGAACCTAAAGAAGTAGAGAAACTTG-TGATTACTCCTGTGAAGAAAGAACT 1364
||||||||||| |||| ||||||||||||||||| | ||||| |||| || ||||||| |
Sbjct 1276 AAACTTGCAGAGCCTATAGAAGTAGAGAAACTTGCT-ATTACACCTGAGATGAAAGAA-T 1333
Query 1365 T-GGTCTTGCATTCAAGGGAAATCAAAAGAATGTGGTTGAATCTTTAGAGG 1414
| |||| |||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 1334 TGGGTCCTGCATTCAAGGGAAATCAAAAGAATGTGGTTGAAGCTTTGGAGG 1384
> AT3G44740.1 | Symbols: | Class II aaRS and biotin synthetases
superfamily protein | chr3:16295970-16297805 REVERSE LENGTH=1224
Length=1224
Score = 891 bits (482), Expect = 0.0
Identities = 588/638 (92%), Gaps = 12/638 (2%)
Strand=Plus/Plus
Query 778 AAGGACTTGTATTACTACAATGGGAGAAAACTTCCCTTTGCTGCTGCTCAAATTGGTCAG 837
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 315 AAGGACTTGTATTACTACAATGGGAGGAAATTTCCCTTTGCTGCTGCTCAAATTGGTCA- 373
Query 838 GCCTTTAGAAATGAGATATCTCCTCGTCAAGGGCTTCTTAGAGTTCGTGAATTCACTCTG 897
||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||
Sbjct 374 ACCTTTAGAAATGAGATATCTCATCGTCAAGGGCTTCTTAGAGTTTGTGAATTCACGCTG 433
Query 898 GCAGAAATTGAGCATTTTGTTGATCCTGAGAATAAGTCACATCTGAAATTCTCTGAGGTA 957
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||
Sbjct 434 GCAGAAATTGAGCATTTTGTTGATCCTGGGAATAAGTCACATCCGAAATTCTCTGATGTA 493
Query 958 GCAAAATTGGAATTCCTGATGTTTCCAAGAGAGGAACAAATGTCTGGCCAATCTGCCAAA 1017
||||| || |||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 494 GCAAATTTTGAATTCCTTATGTTTCCAAGAGAGGAACAAATGTCTGGCCAATCTGCGAAA 553
Query 1018 AAATTTTGCCTTGGCGAAGCTGTTGCCAAGGGAACTGTGAACAATGAAACTCTAGGCTAC 1077
||| ||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||
Sbjct 554 AAACTTTGCCTTGGCGAAGTTGTTGCCAAGGGAACTGTGAACAAAGAAACTGTAGGCTAC 613
Query 1078 TTCATTGGGAGAGTGTATCTTTTCCTTGTCCGTCTTGGCATAGACAAGGAACGGTTGCGT 1137
||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 614 TTCATTGCGAGAGTGTATCTTTTCCTTGTCCGTCTTGGCACAGACAAGGAACAGTTGCGT 673
Query 1138 TTCCGCCAGCATCTAGCAAATGAAATGGCCCACTATGCTGCAGATTGTTGGGATGCTGAA 1197
|||||||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 674 TTCCGCCAGCATTTTGCAAATGAAATGGCCCGCTATGCTGCAGATTGTTTGGATGCTGAA 733
Query 1198 ATTGAGAGTTCATATGGGTGGATTGAATGTGTTGGGATTGCAGATAGGTCTGCGTTTGAC 1257
|||||||||||||||||||||||||||||||||| || |||||||||||||| || |||
Sbjct 734 TTTGAGAGTTCATATGGGTGGATTGAATGTGTTGGTATAGCAGATAGGTCTGCATTCGAC 793
Query 1258 TTATGTGCCCACTCAG-A-AAAAAGTGGCGTTCCTCTTGTGGCTGAAGAGAAACTTGCAG 1315
||| |||||||||| | | |||| ||| ||| |||||||| ||||||| || |||
Sbjct 794 TTACGTGCCCACTCGGTAGGAAAA-----GTTGCTC-TGTGGCTG-AGAGAAATTTCCAG 846
Query 1316 AACCTAAAGAAGTAGAGAAACTTGTGATTACTCCTGTGAAGAAAGAACTTGGT-CTTGCA 1374
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 847 AACCTAAAGAAGTAGAGAAACTTGTGATTACTCCTGTGAAGAAAGAACT-GGTTCTTGCA 905
Query 1375 TTCAAGGGAAATCAAAAGAATGTGGTTGAATCTTTAGA 1412
|||||||||||||||||| |||| ||| ||||||||||
Sbjct 906 TTCAAGGGAAATCAAAAGCATGTCGTTAAATCTTTAGA 943
Score = 180 bits (97), Expect = 6e-44
Identities = 120/130 (92%), Gaps = 5/130 (4%)
Strand=Plus/Plus
Query 1412 AGGCGATGAATGAAG-AAGAAGCTATGCAGATGAAAGCAACTC-TGGAATCCAAAGGGGA 1469
|||||||||||| || || |||||||| |||||||||||| || ||||| ||||||||||
Sbjct 1039 AGGCGATGAATG-AGCAATAAGCTATGGAGATGAAAGCAA-TCTTGGAAACCAAAGGGGA 1096
Query 1470 AGTAGAGTTTTACGTATGTACCCTAGAGAAAAACGTGAGCATCAAGAAGAATATGGTGTC 1529
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 1097 AGTAGAGTTTTACGTATGTACCCTAAAGAGAAACGTGAGCATCAAGAAGAATATGGTGTC 1156
Query 1530 AATCTC-AAA 1538
|||||| |||
Sbjct 1157 AATCTCTAAA 1166
Score = 148 bits (80), Expect = 2e-34
Identities = 125/145 (86%), Gaps = 10/145 (7%)
Strand=Plus/Plus
Query 208 TTTCGACAAAATGTTGTTAATACTCTTGAGCGGCGTTTGTTCTATATTCCTTCATTCAAA 267
|||||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 109 TTTCGACAAAATGTGGTTAATACTCTCGAGCGGCGTTTGTTCTATATCCCTTCTTTCAAA 168
Query 268 ATCTACGGTGGCGTCGCTGGACT-TTTCGATTATGGTCCTCCTGGTTGTGCTGTTAAATC 326
||| || ||| |||||| ||||| ||| ||||| | | |||||||||||||||
Sbjct 169 ATCAACCGTGACGTCGCCGGACTATTT-GATTA-AG-------GATTGTGCTGTTAAATC 219
Query 327 CAATGTTCTTAGCTTCTGGCGTCAA 351
|||||||||||||||||||||||||
Sbjct 220 CAATGTTCTTAGCTTCTGGCGTCAA 244
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100200287820
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5