BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg323168 Length=1998 Score E Sequences producing significant alignments: (Bits) Value AT3G44830.1 | Symbols: | Lecithin:cholesterol acyltransferase ... 3081 0.0 > AT3G44830.1 | Symbols: | Lecithin:cholesterol acyltransferase family protein | chr3:16368890-16372356 FORWARD LENGTH=1998 Length=1998 Score = 3081 bits (1668), Expect = 0.0 Identities = 1890/2000 (95%), Gaps = 4/2000 (0%) Strand=Plus/Plus Query 1 ATGCCTCCACTTCTCCGGTTTAGAAAACTATCGTCCTTCTCTGAAGAGACCGTTAACCCT 60 ||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 1 ATGTCTCCACTTCTCCGGTTTAGAAAACTATCGTCCTTCTCTGAAGATACCATTAACCCT 60 Query 61 AAAGCCAAACAATCGGCCACCGTCGAGAAACCAAAACGTCGTCGTTCCGGGAGATGTAGC 120 ||| ||||||||||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct 61 AAACCCAAACAATCGGCAACCGTCGAGAAACCAAAACGGCGCCGTTCCGGGAGATGTAGC 120 Query 121 TGCGTTGACTCATGTTGCTGGCTGATTGGTTATCTCTGTACGGCTTGGTGGCTTCTTTTA 180 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| | Sbjct 121 TGCGTTGACTCATGTTGCTGGTTGATTGGTTATCTCTGTACGGCGTGGTGGCTTCTCCTC 180 Query 181 TTCCTCTATCACTCTGTTCCGGTCCCGGCGATGCTTCAAGCTCCGGAGTCTCCGGGAACT 240 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TTTCTTTACCACTCTGTTCCGGTCCCGGCGATGCTTCAAGCTCCGGAGTCTCCGGGAACT 240 Query 241 CGGTTGAGTCGAGACGGTGTCAAGGCGCTGCACCCGGTGATTCTTGTTCCGGGGATTGTA 300 ||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||| Sbjct 241 CGGTTGAGTCGAGACGGTGTCAAGGCGTTTCATCCGGTGATTCTTGTTCCGGGGATTGTA 300 Query 301 ACCGGCGGGCTCGAGCTTTGGGAAGGTCGGCCTTGCGCTGAAGGACTCTTTCGTAAACGT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ACCGGCGGGCTCGAGCTTTGGGAAGGTCGGCCTTGCGCTGAAGGACTCTTTCGTAAACGT 360 Query 361 CTTTGGGGTGCTAGCTTCACCGAGATTCTTAGAAGGCCATTGTGCTGGTTGGAGCACTTA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTTTGGGGTGCTAGCTTCTCCGAGATTCTTAGAAGGCCATTGTGCTGGTTGGAGCACTTA 420 Query 421 TCTCTGGACAGTGAGACTGGTCTCGACCCACCGGGAATACGAGTCCGAGCAGTCCCAGGA 480 ||||| ||||||||||| |||||||| ||| ||||||| || |||||||||||||||||| Sbjct 421 TCTCTAGACAGTGAGACCGGTCTCGATCCATCGGGAATCCGTGTCCGAGCAGTCCCAGGA 480 Query 481 CTGGTGGCTGCAGACTATTTCGCACCGTGCTACTTTGCTTGGGCAGTTCTCATAGAGAAT 540 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 481 CTAGTGGCTGCAGACTATTTCGCACCATGCTACTTTGCTTGGGCAGTTCTCATAGAGAAT 540 Query 541 TTGGCGAAAATTGGATATGAAGGCAAGAACCTTCATATGGCCTCTTATGATTGGAGACTC 600 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 541 TTGGCAAAAATTGGATATGAAGGCAAGAACCTTCACATGGCCTCTTATGATTGGAGACTC 600 Query 601 TCTTTCCATAACACCGAGGTACGTGACCAATCGTTAAGTAGACTGAAGAGTAAAATCGAG 660 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 601 TCTTTCCATAACACCGAGGTACGTGACCAATCGTTAAGTAGACTGAAGAGCAAAATCGAG 660 Query 661 CTAATGTATGCCACCAATGGGTATAAGAAAGTGGTGGTGGTGCCTCATTCAATGGGGGCT 720 |||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| Sbjct 661 CTAATGTATGCCACCAATGGGTTTAAGAAAGTTGTGGTGGTTCCGCATTCAATGGGGGCT 720 Query 721 ATCTATTTCCTTCACTTCCTTAAGTGGGTGGAAACACCTCTTCATGATGGAGGAGGTGGT 780 ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||| Sbjct 721 ATCTATTTCCTTCACTTCCTTAAATGGGTAGAAACACCTCTTCCTGATGGAGGCGGTGGG 780 Query 781 GGTGGTCCAGGTTGGTGCGCCAAACACATCAAAGCCGTCGTCAACATTGGACCCGCCTTT 840 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 781 GGTGGTCCAGGTTGGTGTGCCAAACACATCAAATCCGTCGTCAACATTGGACCCGCCTTT 840 Query 841 TTAGGTGTCCCTAAAGCCGTCAGTAATTTGCTTTCAGCTGAGGGCAAAGACATCGCTTAC 900 |||||||| |||||||||||||||||||| ||||| ||||| |||||||||||||||||| Sbjct 841 TTAGGTGTTCCTAAAGCCGTCAGTAATTTACTTTCTGCTGAAGGCAAAGACATCGCTTAC 900 Query 901 GCCAGATCGTTAGCACCCGGTCTCCTGGACTCGGAACTTCTCAAGCTGCAAACACTCGAA 960 |||||||| || || || |||||| ||||||||||||||||||||||||||||||||||| Sbjct 901 GCCAGATCTTTGGCTCCAGGTCTCTTGGACTCGGAACTTCTCAAGCTGCAAACACTCGAA 960 Query 961 CATCTTATGCGGATGTCACATAGCTGGGATTCAATAGTTTCTTTATTACCAAAGGGGGGT 1020 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 961 CACCTTATGCGGATGTCACATAGCTGGGATTCAATAGTATCTTTATTACCAAAGGGCGGT 1020 Query 1021 GAGGCAATCTGGGGAGATCTTGACTCGCACGCTGAAGAAGGCCACAATTGTATTTACTCC 1080 |||||||| ||||| ||||| |||||||||||||||||||| | |||||||||||||||| Sbjct 1021 GAGGCAATTTGGGGCGATCTAGACTCGCACGCTGAAGAAGGACTCAATTGTATTTACTCC 1080 Query 1081 AAGAGAAAATCATCGCAGCTATTGCTAAGTAGTCTCCATAGACAAAACTACAGCAATAAA 1140 |||||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||| Sbjct 1081 AAGAGAAAATCATCGCAGCTATCGCTAAGTAATCTCCATAAACAAAACTACAGCCTTAAA 1140 Query 1141 CCGGAGTCTTGGGTGAAAGAACCCGCAAAATACGGAAGAATTATAGCTTTCGGAAAACGA 1200 |||| ||| ||||||||||||||||||| ||||||||||| || ||||||| |||||| Sbjct 1141 CCGGTGTCACGGGTGAAAGAACCCGCAAAGTACGGAAGAATCGTATCTTTCGGGAAACGA 1200 Query 1201 GCATCTGAACTGCCTTCCTCACAACTCTCTACGCTAAACATCAAGGAACTGTCAAGAGTA 1260 ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1201 GCATCAGAACTGCCTTCCTCACAACTCTCTACGCTAAACGTCAAGGAACTGTCAAGAGTA 1260 Query 1261 GACT-GCACTTCAAACGACAGTACATCATGTGGAGAATTTTGGTCGGAGTACAATGAAAT 1319 || | ||| |||||| |||||||||||||||||||| |||||||| |||||||||||||| Sbjct 1261 GA-TGGCAATTCAAATGACAGTACATCATGTGGAGAGTTTTGGTCAGAGTACAATGAAAT 1319 Query 1320 GAGCCGAGAAAGCATAGTAAAAGTAGCAGAAAACACAGCTTACACGGCCACCACTGTTCT 1379 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 1320 GAGCCGAGAAAGCATAGTAAAAGTAGCAGAAAACACAGCTTATACAGCCACCACTGTTCT 1379 Query 1380 TGATCTTCTCCGATTTATAGCCCCTAAGATGATGAGACGAGCTGAAGCTCATTTCTCTCA 1439 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1380 TGATCTTCTTCGATTTATAGCCCCTAAGATGATGAGACGAGCCGAAGCTCATTTCTCTCA 1439 Query 1440 CGGCATTGCTGATGATCTCGATGACCCTAAGTATGGACATTATAAGTACTGGTCTAATCC 1499 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1440 CGGCATTGCTGATGATCTTGATGACCCTAAGTATGGACATTATAAGTACTGGTCTAATCC 1499 Query 1500 ACTCGAGACAAAATTACCGTATGCACCAGAGATGGAAATGTACTGTCTTTATGGAGTAGG 1559 ||||||||| ||||||||| | ||||||||||||||||||||||||||||| |||||||| Sbjct 1500 ACTCGAGACCAAATTACCGGAGGCACCAGAGATGGAAATGTACTGTCTTTACGGAGTAGG 1559 Query 1560 GATTCCGACAGAAAGATCTTACATATACAAGCTCGCAACCTCTTCCAATAAATGCAAGAG 1619 ||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1560 GATTCCGACCGAGAGATCTTACATATACAAGCTCGCAACCTCTTCCGGTAAATGCAAGAG 1619 Query 1620 CAGCATTCCCTTCAC-GATAGATGGATCTGTGAATGGAGATGACGTTTGTCTTAAAGGAG 1678 ||||||||||||| | ||||||||||||| || |||||||||||||||||||||| |||| Sbjct 1620 CAGCATTCCCTTC-CGGATAGATGGATCTCTGGATGGAGATGACGTTTGTCTTAAGGGAG 1678 Query 1679 GAACTCGGTTTGCGGATGGAGACGAGAGTGTACCGGTCATAAGTGCTGGATTTATGTGCG 1738 |||| ||||||||||| |||||||||||||||||||| |||||||| || |||||||||| Sbjct 1679 GAACACGGTTTGCGGACGGAGACGAGAGTGTACCGGTGATAAGTGCGGGGTTTATGTGCG 1738 Query 1739 CAAAGGGGTGGAGAGGAAAAACACGGTTTAACCCGTCGGGGATGGAGACATTCGTGCGGG 1798 ||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||| Sbjct 1739 CAAAGGGATGGAGAGGAAAAACACGGTTTAACCCGTCAGGGATGGATACATTCTTGCGGG 1798 Query 1799 AATACAAACACAAGCCGCCAGGAAGTCTACTGGAAAGTCGAGGAACGGAAAGCGGAGCTC 1858 |||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1799 AATACAAACATAAGCCGCCGGGAAGTCTACTAGAAAGTCGAGGAACGGAAAGCGGAGCTC 1858 Query 1859 ATGTAGACATAATGGGTAATGTTGGACTCATTGAAGATGTTTTGAGGATAGCTGCCGGAG 1918 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1859 ATGTAGACATAATGGGTAATGTTGGACTCATTGAAGATGTTTTGAGGATAGCTGCCGGAG 1918 Query 1919 CTTCAGGCCAGGAGATTGGTGGCGATAGAATTTACTCGGATGTGATGAGGATGTCGGAGA 1978 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1919 CTTCAGGCCAGGAGATTGGTGGCGATAGAATTTACTCGGATGTGATGAGGATGTCGGAGA 1978 Query 1979 GGATTAGCATCAAGTTGTGA 1998 | |||||||||||||||||| Sbjct 1979 GAATTAGCATCAAGTTGTGA 1998 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 98995474740 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5