BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323174
Length=2127
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44930.1 | Symbols: ATCHX10, CHX10 | cation/H+ exchanger 10 ... 1580 0.0
AT3G44920.1 | Symbols: ATCHX11, CHX11 | cation/H+ exchanger 11 ... 1474 0.0
> AT3G44930.1 | Symbols: ATCHX10, CHX10 | cation/H+ exchanger 10
| chr3:16402058-16404672 REVERSE LENGTH=2352
Length=2352
Score = 1580 bits (855), Expect = 0.0
Identities = 1071/1172 (91%), Gaps = 28/1172 (2%)
Strand=Plus/Plus
Query 1 ATGAACAGGACTACCTACATTGGGGATTGCCGAATATCATTCTTCAACATATCTTCTAAG 60
||||||| |||||| |||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1 ATGAACACGACTACTTACATTGGGGATTGTCGAATATCATTCTTCAACATATCTTCCCAG 60
Query 61 GGATTTTGGGAGAACCTAAAATCGCCCGATGTAGTTTTTGGGTACTCGCTGCCTCTCCTG 120
||||||||||| |||||||||||||| ||||| ||||| || |||||||||||||||||
Sbjct 61 GGATTTTGGGATAACCTAAAATCGCCTGATGTGGTTTTCGGCTACTCGCTGCCTCTCCTA 120
Query 121 GAGATTCAAATAATTGTTATATTCTTCTGCATTGTCATGTCTCACATGTTCCTCAGATGC 180
|||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||||
Sbjct 121 GAGATTCAGATAATACTGATATTCTTCTGCATTGTCATGTCTCATATGTTCCTCAGATGC 180
Query 181 ATTGGCATTTCCCAGATTGCTTCATATATGATT-CT----T--TTC----G----A---- 221
|| ||||||||||| || ||||||||||||||| || | ||| | |
Sbjct 181 ATCGGCATTTCCCAAATCGCTTCATATATGATTGCTGGAATAGTTCTAGGGCCTCAGCTT 240
Query 222 --T-A--TACTGGAGAAATCTTCAGGGAAACTATCGGTGGATCCTGCGTTAGATGGAACT 276
| | |||| ||||||||||||||||||||||| |||||||||||||| ||||||| |
Sbjct 241 TTTGATGTACTAGAGAAATCTTCAGGGAAACTATCCGTGGATCCTGCGTTGGATGGAA-T 299
Query 277 -GCGGCGTTAAGATGCATCTCGGTGTTTGGAACACTAATGTTTACGTTTCTAATGACTGT 335
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 CGCAGCGTTAAGATGCATCTCGGTGTTTGGAACACTAATGTTTACGTTTCTAATGACTGT 359
Query 336 TAGAACCAGCAGACGAGTGGCGTTCCATAGCGGAAAACTACCCGTTGTAATCGGGATTGT 395
|||||||||||| |||||||||||||||||||||||| | |||||||| |||||||| ||
Sbjct 360 TAGAACCAGCAGGCGAGTGGCGTTCCATAGCGGAAAATTGCCCGTTGTGATCGGGATCGT 419
Query 396 GTCCTTCTTTGCTCCTCTGTTCGGTCTCGGTTTCCAGAACCTTTTCTCTGACAACATCGA 455
||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct 420 GTCCTTCTTTGCTCCTCTGTTTGGTCTCGGTTTCCAGAATTTTTTTTCTGACAACATCGA 479
Query 456 CCCTCACTACATGCCTCTAGA-TAAAGCCCTGGGCGAGCGCACTGCGATTGTCGTAACTC 514
||||||||||||||||||| | ||||||||| || |||||||||||||||||| ||||||
Sbjct 480 CCCTCACTACATGCCTCTA-ACTAAAGCCCTAGGTGAGCGCACTGCGATTGTCATAACTC 538
Query 515 AGTCTTCAATACTTTTGCCTTCCACTACATATATCTTGCTAGAGCTCAAGATCATCAACT 574
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 AATCTTCGATACTTTTGCCTTCCACTACATATATCTTGCTAGAGCTCAAGATCATCAACT 598
Query 575 CCGAGCTTGGTCGCCTTGCATTGTCTGCATGTGTCATCAACGACATCTTGGGGATTTTTT 634
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 CCGAGCTAGGTCGCCTTGCATTGTCTGCATGTGTCATCAACGACATCTTGGGGATTTTTT 658
Query 635 CCATGATAGCCGCCTCTAGACAAGCAACCTACATTCATGTTTCACATGCAACAGCATATC 694
||||||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||
Sbjct 659 CCATGATAGTTGCCTCTATACAAGCGACCTACATTCATGTTTCACATGCAACAGCCTATC 718
Query 695 GTGACATTGTCGCGGTGATCATCTTCTTTCTCGTCGTCTTTCTTGTTTTTAAGCCGATGG 754
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 719 GTGACACTGTCGCGGTGATCATCTTTTTTCTCGTCGTCTTTCTTGTTTTTAAGCCTATGG 778
Query 755 TGCAATGGGTCATAGACCGCACACCGGAAGACAAGCCGGTGGAGGATATATACATTCATG 814
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 779 TGCAATGGGTCATAGACCGCACACCGGAAGACAAGCCAGTGGAGGATATGTACATTCATG 838
Query 815 CCTTGATTCTGACCGCATTCGCTTCCGCTGTTTATTTTGTGTCTTTCAACATGAAATACA 874
|| ||||| | |||||||| |||||||||| ||||||||||| ||||||||||||||| |
Sbjct 839 CCGTGATTATTACCGCATTGGCTTCCGCTGCTTATTTTGTGTTTTTCAACATGAAATATA 898
Query 875 TTTTAGGACCACTAATGATCGGCATCATCATACCTGAGGGTCCACCGTTAGGATCGGCTC 934
||||||||||| ||||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct 899 TTTTAGGACCATTAATGATTGGCATCATCATACCAGAGGGTCCACCATTAGGATCGGCTC 958
Query 935 TGGAGGCTAAGTTTGAGAGGCTCACGATGAATGTGTTCTTACCAATCTCAGTCACATTCA 994
| ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct 959 TAGAGGCTAAGTTTGAGAGGCTCACAATGAACGTGTTCTTACCAATCTCAATCACATTCA 1018
Query 995 GCGCGATGAGATGTGATGGAGTAAGGATCCTCAATCATTTCACTGACATCTTCTTCAACA 1054
||||||||||||||||||||| ||||||||| | || |||| |||||||||||||||||
Sbjct 1019 GCGCGATGAGATGTGATGGAGCAAGGATCCTTAGCCAGTTCAATGACATCTTCTTCAACA 1078
Query 1055 TCTTCCTAACATTTCTTATACTTGTCATAAAACTGGTTGCATGCCTTGCACCTTGCTTGT 1114
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1079 TCTTCCTAACATTTCTTATACTTGTCATAAAACTGGTCGCATGCCTTGCACCTTGCTTGT 1138
Query 1115 ACTACAAGTTACCTCTTAGCGAATCCATGGCT 1146
|||||||||||||||| || |||||| |||||
Sbjct 1139 ACTACAAGTTACCTCTCAGTGAATCCTTGGCT 1170
Score = 538 bits (291), Expect = 8e-152
Identities = 357/387 (92%), Gaps = 11/387 (3%)
Strand=Plus/Plus
Query 1741 ATTGG-GAAAAGGATGAAACATAACCCGAGGGTCCGTGTAACCGTGATCCGACTCGTCTT 1799
||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1962 ATTGGTGAAGAGGATGAAAAATAACCCGAGGATCCGTGTAACCGTGATCCGACTCGTCTT 2021
Query 1800 CGACCAT-ATAATAGAGTCAGAGTGGGATTATATT-TTGGATAATGAAGGCTTAAAGGAT 1857
||||||| | |||||||||||| |||||||||||| || ||||| |||||||||||||||
Sbjct 2022 CGACCATGA-AATAGAGTCAGATTGGGATTATATTCTT-GATAACGAAGGCTTAAAGGAT 2079
Query 1858 TTGAAGAGTACAGAAGACAACAAAGATATT-ATTTATATAGAGAGAATTGTGACCAGTGG 1916
||||||||||| |||||||||||||||||| | |||||||||||| |||||||| ||| |
Sbjct 2080 TTGAAGAGTACTGAAGACAACAAAGATATTGA-TTATATAGAGAGGATTGTGACTAGTAG 2138
Query 1917 TGTTGAGGTAGTCACCGCTGTCCAATTGCTCGCCGAAGAGTACGATCTTATGGTGGTCGG 1976
|||||||||||||| |||||||||||||| || |||||||||||||| |||||||||||
Sbjct 2139 TGTTGAGGTAGTCAAAGCTGTCCAATTGCTTGCAGAAGAGTACGATCTAATGGTGGTCGG 2198
Query 1977 GAGAGATCATGATATGACATCACAAAACTTGA-CAGGACTAATGGAGTGGGTCGAACTTC 2035
||||||||||||||||||||||||| |||| | ||||||||||||| ||||||||||| |
Sbjct 2199 GAGAGATCATGATATGACATCACAAGACTT-ATCAGGACTAATGGAATGGGTCGAACTAC 2257
Query 2036 CAGAGTTAGGTGTCATTGGGGATTTGCTGGCGGCTAGAGATCTCAA-CTCTAAGGTCTCG 2094
|||||||||||||||| |||||||||||||||||||||||||| || ||||||||| |||
Sbjct 2258 CAGAGTTAGGTGTCATCGGGGATTTGCTGGCGGCTAGAGATCT-AAGCTCTAAGGTTTCG 2316
Query 2095 GTTTTAGTAGTTCAACAACAACAACAA 2121
|||||||||||||||||||||||||||
Sbjct 2317 GTTTTAGTAGTTCAACAACAACAACAA 2343
Score = 492 bits (266), Expect = 7e-138
Identities = 359/405 (89%), Gaps = 2/405 (0%)
Strand=Plus/Plus
Query 1342 CTCGTTGGTCAGATCAACCCCATCATAGTCTCAAACAACAAGATGTTGAAACGGCTTAAC 1401
|||||||||||||| ||||| |||||||||||| || |||||| |||||||||||||||
Sbjct 1516 CTCGTTGGTCAGATAAACCCTATCATAGTCTCACACGACAAGAAATTGAAACGGCTTAAC 1575
Query 1402 AAAAACTCGTACATCCATACCGCAAACCTTGCCTTTAAACAGTTCATGCTAGAAAGCTTA 1461
||| |||| |||||||||||||||||||||||||||| ||| ||| || |||||||||||
Sbjct 1576 AAAGACTCATACATCCATACCGCAAACCTTGCCTTTAGACAATTCGTGTTAGAAAGCTTA 1635
Query 1462 GACTCTGTAACCGTGACAACGTTCACCGCGTTCTCGCATGAGAACTTGATGCATGAAGAC 1521
|| ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct 1636 GAGTCTGTAACCGTGACAACGTTCACTGCGTTCTCGCATGAAAACTTGATGCACGAAGAC 1695
Query 1522 ATTTGCACACTTGCACTTGACGGGATGACTTCGATGATTGTAGTCCCATCGGGGAGGAAA 1581
||||| ||||||||||||||| | || ||||||||||| ||||||||||||||||||
Sbjct 1696 ATTTGTACACTTGCACTTGACAAAACAACATCGATGATTGTCGTCCCATCGGGGAGGAAA 1755
Query 1582 TGGACCACAGATGGGATGTTTGAGTCTGACGACAATGCCATTAGACATCTAAACCAGTCA 1641
||||| ||||||| | || ||||||||| ||| ||| || |||||||||||||||||
Sbjct 1756 TGGACTGTAGATGGGTTATTCGAGTCTGACAACACTGCTATAAGACATCTAAACCAGTCG 1815
Query 1642 TTACTAGATCGTGCGCCTTGTTCTATAGGCATATTAGTAGACCGTGGACAATTCTCGCAG 1701
||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| |
Sbjct 1816 TTACTCGATCGTGCGCCTTGTTCTATCGGCATACTAGTAGACCGTGGACAATTCTCGC-G 1874
Query 1702 AAAA-GTAATGTAATAAGCAAAAGAAGGTACAACATTGATATTGG 1745
|||| ||| ||||| ||||||| |||||||| ||||||| ||||
Sbjct 1875 AAAAAGTATTGTAACGAGCAAAAAAAGGTACATCATTGATGTTGG 1919
> AT3G44920.1 | Symbols: ATCHX11, CHX11 | cation/H+ exchanger 11
| chr3:16397038-16399725 REVERSE LENGTH=2352
Length=2352
Score = 1474 bits (798), Expect = 0.0
Identities = 1052/1172 (90%), Gaps = 28/1172 (2%)
Strand=Plus/Plus
Query 1 ATGAACAGGACTACCTACATTGGGGATTGCCGAATATCATTCTTCAACATATCTTCTAAG 60
||||||| |||||| ||||||||| ||||||| |||||||||||||||||||||||| ||
Sbjct 1 ATGAACACGACTACTTACATTGGGCATTGCCGGATATCATTCTTCAACATATCTTCTCAG 60
Query 61 GGATTTTGGGAGAACCTAAAATCGCCCGATGTAGTTTTTGGGTACTCGCTGCCTCTCCTG 120
|||||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||
Sbjct 61 GGATTTTGGGAGAACCTAAAATCGCCTGATGTGGTTTTCGGGTACTCGTTGCCTCTCCTG 120
Query 121 GAGATTCAAATAATTGTT-ATATTCTTCTGCATTGTCATGTCTCACATGTTCCTCAGATG 179
||||||||||||| | || |||||||||||||||||||||||||| ||||||||||||||
Sbjct 121 GAGATTCAAATAA-TATTGATATTCTTCTGCATTGTCATGTCTCATATGTTCCTCAGATG 179
Query 180 CATTGGCATTTCCCAGATTGCTTC--ATAT-A----T-G----A---T------T---CT 215
||| ||| |||||||||| | ||| |||| | | | | | | ||
Sbjct 180 CATCGGCGTTTCCCAGATCGTTTCATATATGATTGCTGGACTAATTCTAGGGCCTCAGCT 239
Query 216 TTTCGATATACTGGAGAAATCTTCAGGGAAACTATCGGTGGATCCTGCGTTAGATGGAAC 275
|||||||||||| ||||| |||||||| |||||||||| |||||||||||| ||||||||
Sbjct 240 TTTCGATATACTAGAGAAGTCTTCAGGAAAACTATCGGCGGATCCTGCGTTGGATGGAAC 299
Query 276 TGCGGCGTTAAGATGCATCTCGGTGTTTGGAACACTAATGTTTACGTTTCTAATGACTGT 335
|| |||||||||||||| || || ||||||| |||||||||||||||||||||||||||
Sbjct 300 CGCAGCGTTAAGATGCATTTCAGTATTTGGAAGACTAATGTTTACGTTTCTAATGACTGT 359
Query 336 TAGAACCAGCAGACGAGTGGCGTTCCATAGCGGAAAACTACCCGTTGTAATCGGGATTGT 395
||| |||||||| || ||||||||||||||||||||| | || ||||| |||||||| ||
Sbjct 360 TAGGACCAGCAGGCGGGTGGCGTTCCATAGCGGAAAATTGCCAGTTGTGATCGGGATCGT 419
Query 396 GTCCTTCTTTGCTCCTCTGTTCGGTCTCGGTTTCCAGAACCTTTTCTCTGACAACATCGA 455
|||||||||||||||| |||| ||||| |||||| |||||||||| |||||||||||||
Sbjct 420 GTCCTTCTTTGCTCCTTTGTTTAGTCTCAGTTTCCTGAACCTTTTCACTGACAACATCGA 479
Query 456 CCCTCACTACATGCCTCTAGATAAAGCCCTGGGCGAGCGCACTGCGATTGTCGTAACTCA 515
||||||||||||| || |||| |||||||||| ||||||||||| ||||||| |||||||
Sbjct 480 CCCTCACTACATGTCTTTAGACAAAGCCCTGGCCGAGCGCACTGTGATTGTCATAACTCA 539
Query 516 GTCTTCA-ATACTTTTGCCTTCCACTACATATATCTTGCTAGAGCTCAAGATCATCAACT 574
||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 540 GTC-TCAGATACTTTTGCCTTCCACTACATATATATTGCTAGAGCTCAAGATCATCAACT 598
Query 575 CCGAGCTTGGTCGCCTTGCATTGTCTGCATGTGTCATCAACGACATCTTGGGGATTTTTT 634
|||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||
Sbjct 599 CCGAGCTTGGTCGCCTTGCATTATCTGCAAGTGCCATCAACGACATGTTGGGGATTTTTG 658
Query 635 CCATGATAGCCGCCTCTAGACAAGCAACCTACATTCATGTTTCACATGCAACAGCATATC 694
||||||||| |||| ||| |||||||||||||||||||||||||||||||| ||| || |
Sbjct 659 CCATGATAGTCGCCACTACACAAGCAACCTACATTCATGTTTCACATGCAATAGCTTACC 718
Query 695 GTGACATTGTCGCGGTGATCATCTTCTTTCTCGTCGTCTTTCTTGTTTTTAAGCCGATGG 754
||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 719 GTGACCTTGTCGCGGTGATCATCTTCTTTCTCATCGTCTTTTTTGTTTTTAAGCCGATGG 778
Query 755 TGCAATGGGTCATAGACCGCACACCGGAAGACAAGCCGGTGGAGGATATATACATTCATG 814
|||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 779 TGCAATGGATCATAGACCGCACACCCGAAGACAAGCCCGTGGAGGATATATACATTCATG 838
Query 815 CCTTGATTCTGACCGCATTCGCTTCCGCTGTTTATTTTGTGTCTTTCAACATGAAATACA 874
|| |||||||||| ||||| |||||||| | ||||||||||| ||||||||||||||||
Sbjct 839 CCGTGATTCTGACAGCATTTGCTTCCGCGGCTTATTTTGTGTTTTTCAACATGAAATACG 898
Query 875 TTTTAGGACCACTAATGATCGGCATCATCATACCTGAGGGTCCACCGTTAGGATCGGCTC 934
| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 899 TCTTAGGACCATTAATTATCGGCATCATCATACCAGAGGGTCCACCGTTAGGATCCGCTC 958
Query 935 TGGAGGCTAAGTTTGAGAGGCTCACGATGAATGTGTTCTTACCAATCTCAGTCACATTCA 994
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 959 TGGAGGCTAAGTTTGAGAGGCTCACGATGAACGTGTTCTTACCAATCTCAATCACATTCA 1018
Query 995 GCGCGATGAGATGTGATGGAGTAAGGATCCTCAATCATTTCACTGACATCTTCTTCAACA 1054
|||||||||||||||||||| |||||||||| | || ||||||||||||| ||||||||
Sbjct 1019 GCGCGATGAGATGTGATGGACTAAGGATCCTTAGCCAGTTCACTGACATCTACTTCAACA 1078
Query 1055 TCTTCCTAACATTTCTTATACTTGTCATAAAACTGGTTGCATGCCTTGCACCTTGCTTGT 1114
||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||
Sbjct 1079 TCTTCCTAACATTGCTTATACTTGTCATAAAACTGGTTGCTTGCCTTACACTTTGCTTGT 1138
Query 1115 ACTACAAGTTACCTCTTAGCGAATCCATGGCT 1146
||||||||||||||| || |||||| |||||
Sbjct 1139 ACTACAAGTTACCTCGCAGTGAATCCTTGGCT 1170
Score = 488 bits (264), Expect = 8e-137
Identities = 347/386 (90%), Gaps = 9/386 (2%)
Strand=Plus/Plus
Query 1741 ATTGG-GAAAAGGATGAAACATAACCCGAGGGTCCGTGTAACCGTGATCCGACTCGTCTT 1799
||||| ||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 1962 ATTGGTGAAGAGGATGAAATATAACCCGCGGGTCCGTGTAACCGTGATCCGACTCATCTT 2021
Query 1800 CGACCAT-ATAATAGAGTCAGAGTGGGATTATATT-TTGGATAATGAAGGCTTAAAGGAT 1857
||||||| | |||||||||||||||||| |||||| || ||||| || ||| | ||||||
Sbjct 2022 CGACCATGA-AATAGAGTCAGAGTGGGACTATATTCTT-GATAACGAGGGCCTGAAGGAT 2079
Query 1858 TTGAAGAGTACAGAAGACAACAAAGATATTATTTATATAGAGAGAATTGTGACCAGTGGT 1917
|| |||||||| ||| ||| |||||||| |||||| |||||| |||||||| ||| ||
Sbjct 2080 TTAAAGAGTACTGAATCCAATGAAGATATTCTTTATACAGAGAGGATTGTGACTAGT-GT 2138
Query 1918 -GTTGAGGTAGTCACCGCTGTCCAATTGCTCGCCGAAGAGTACGATCTTATGGTGGTCGG 1976
||||||||||||| |||||||||||||| || |||||||||||||| |||||||||||
Sbjct 2139 CGTTGAGGTAGTCAAAGCTGTCCAATTGCTTGCAGAAGAGTACGATCTAATGGTGGTCGG 2198
Query 1977 GAGAGATCATGATATGACATCACAAAACTTGA-CAGGACTAATGGAGTGGGTCGAACTTC 2035
||||||||||||||||||||||||| |||| | ||||||||| ||| ||||||||||| |
Sbjct 2199 GAGAGATCATGATATGACATCACAAGACTT-ATCAGGACTAACGGAATGGGTCGAACTAC 2257
Query 2036 CAGAGTTAGGTGTCATTGGGGATTTGCTGGCGGCTAGAGATCTCAACTCTAAGGTCTCGG 2095
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2258 CAGAGTTAGGTGTCATCGGGGATTTGCTGGCGGCTAGAGATCTAAACTCTAAGGTCTCGG 2317
Query 2096 TTTTAGTAGTTCAACAACAACAACAA 2121
||||||||||||||||||||||||||
Sbjct 2318 TTTTAGTAGTTCAACAACAACAACAA 2343
Score = 486 bits (263), Expect = 3e-136
Identities = 360/406 (89%), Gaps = 10/406 (2%)
Strand=Plus/Plus
Query 1345 GTTGGTCAGATCAACCCCATCATAGTCTCAAACAACAAGATGTTGAAACGGCTTAACAAA 1404
||||||||||||||||| |||||||| ||| || |||||| |||||| |||||| |||||
Sbjct 1519 GTTGGTCAGATCAACCCTATCATAGTGTCACACGACAAGAAGTTGAAGCGGCTTCACAAA 1578
Query 1405 AACTCGTACATCCATACCGCAAACCTTGCCTTTAAACAGTTCATGCTAGAAAGCTTAGAC 1464
||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||
Sbjct 1579 AACTCGTACATCCATACCGCAAATCTTGCCTTTAGACAGTTCATGCAAGAAAGCTTAGAG 1638
Query 1465 TCTGTAACCGTGACAACGTTCACCGCGTTCTCGCATGAGAACTTGATGCATGAAGACATT 1524
|||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1639 TCTGTAACCGTGACTACGTTCACCGCGTTCTCGCATGAAAACTTGATGCACGAAGACATA 1698
Query 1525 TGCACACTTGCACTTGA-CGGGATGACTTCGATGATTGTAGTCCCATCGGGGAGGAAATG 1583
|| |||||||||||||| || | || ||||||||||| ||||||||||||||||||||
Sbjct 1699 TGTACACTTGCACTTGATCGA-ACAACATCGATGATTGTCGTCCCATCGGGGAGGAAATG 1757
Query 1584 GACCACAGATGGGATGTTTGAGTCTGACGACAATGC--CATTAGACATCTAAACCAGTCA 1641
|||| |||||||||||| |||||||||||| ||| || ||||| ||||||||||||
Sbjct 1758 GACCGTAGATGGGATGTTCGAGTCTGACGACCTTGCTGCA--AGACAACTAAACCAGTCA 1815
Query 1642 TTACTAGATCGTGCGCCTTGTTCTATAGGCATATTAGTAGACCGTGGACAATTCTCGCAG 1701
||||| ||||||||||||||||| ||||||||| ||||||| |||||||||||||||| |
Sbjct 1816 TTACTCGATCGTGCGCCTTGTTCGATAGGCATACTAGTAGATCGTGGACAATTCTCGCGG 1875
Query 1702 AAAAG-TAATGTAATAAGCAA-AAGAAGGTACAACATTGATATTGG 1745
||||| || ||||| ||||| || | |||||||||||||| ||||
Sbjct 1876 AAAAGCTA-TGTAACGAGCAAGAATA-GGTACAACATTGATGTTGG 1919
Score = 224 bits (121), Expect = 3e-57
Identities = 164/184 (89%), Gaps = 6/184 (3%)
Strand=Plus/Plus
Query 1149 CATATCACAGGCCACTTACGCCTTCTTAATCCTTTATTCGCTACTAAATGCCGGGGTTGT 1208
||||||||||||||||||||| ||||||||||| ||||||||||||| || | ||| |
Sbjct 1242 CATATCACAGGCCACTTACGCGTTCTTAATCCTATATTCGCTACTAAGTG-CAGGG--AT 1298
Query 1209 CCGTGTCCCTATGGTCTTAAGGAGCATGTACGATCCGAAACGAAAGTACCTTAACTACCA 1268
||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||
Sbjct 1299 ---TGTCCCTATGGTCGTAAGGAGCATGTACGATCCGAAACGAAAGTACGTTAATTATCA 1355
Query 1269 GAAAAGGGACATACTGCATCTAGGACCAAACTCAGAACTTCGAATTCTAACTTGTTTGCA 1328
||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||||||
Sbjct 1356 GAAAAGGGACATATTGCATCTAGAAGCAAACTCAGGTCTTCGAATTCTAACTTGTTTGCA 1415
Query 1329 CAAA 1332
||||
Sbjct 1416 CAAA 1419
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105471345045
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5