BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323187
Length=2157
Score E
Sequences producing significant alignments: (Bits) Value
AT3G45090.1 | Symbols: | P-loop containing nucleoside triphosp... 3253 0.0
AT5G60760.1 | Symbols: | P-loop containing nucleoside triphosp... 1155 0.0
> AT3G45090.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:16490600-16494762
REVERSE LENGTH=2535
Length=2535
Score = 3253 bits (1761), Expect = 0.0
Identities = 2035/2166 (94%), Gaps = 23/2166 (1%)
Strand=Plus/Plus
Query 1 ATGATGACGGAGACAACGACGAAGGTTTTGTATATAGTGGTGCGTGAAGAAGGTGAGGAT 60
|||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 230 ATGATGACGGAG---GCGACGAAGGTGTTGTATATAGTGGTGCGTGAAGAAGGTGATGAT 286
Query 61 GATGATAATAATGGAGATGATTCGTTTCGTTACACGCGTCCTGTTTTGCAGAGTACTCTT 120
||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||
Sbjct 287 GATGATAATAATGGAGATGATTCGTTTAGGTATACGCGTCCTGTTTTGCAGAGTACTCTT 346
Query 121 CAGCTTATGGGTTGCAAAGCTCGTCACGCCTTCAAGATCAGCCAAAGGGTTTTTGAGTTA 180
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 347 CAGCTTATGGGTTGCAAAGCTCGTCACGCCTTCAAGATCAGCCGTAGGGTTTTTGAGTTA 406
Query 181 ATAAGAAGCGAGGGATCTTGTAATAGC-TCACCAGAGAATGGGAAGGAAACTGAATTTAC 239
|||||||| |||||||||||||||| | ||||||||||||||||||||| |||||||| |
Sbjct 407 ATAAGAAGTGAGGGATCTTGTAATA-CTTCACCAGAGAATGGGAAGGAACCTGAATTTGC 465
Query 240 TAAGGAAGTTGGTGGTTCAACTTGTGTAGAGAAACTTAACTGTTTGGTTGCTGATGATGT 299
|||||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 466 TAAGGAAGTTGGTGGTTCAACTTGTGTAGAGAAACTTAACTGTTTGGTTG-T--TGCTGG 522
Query 300 TGATGTTGACAAGAATAAAAGTAAACCGTTTGAGATGTACAAAAGGCGGACAACTGTTGT 359
|||||||||||||||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct 523 TGATGTTGACAAGAATAAGAGTAAGCCATTTGAGATGTACAAAAGACGGACAACTGTTGT 582
Query 360 TGTTTCACGGGAAATATTC-TTGGATGTTGTGTGTGATGCCCTGGCTGAGTATAAGTACG 418
||||||||| || |||||| || ||||||||||||||||| |||||||| |||||||| |
Sbjct 583 TGTTTCACGAGAGATATTCGTT-GATGTTGTGTGTGATGCACTGGCTGAATATAAGTATG 641
Query 419 TTGGTCGCGACCAAAGGGCAGATTTGATTCTGGCATGCAGAATCCGAGAAAGGAAAGAAT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 642 TTGGTCGCGACCAAAGGGCAGATTTGATTCTGGCATGCAGAATCCGAGAAAGGAAAGAAT 701
Query 479 CTGTAACTGTTTTGCTCTGTGGCACCAGTGGCTGTGGTAAATCTACATTGTCTGCATTGC 538
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 702 CTGTAACTGTTTTGCTCTGTGGCACCAGCGGCTGTGGTAAATCTACGTTGTCTGCATTGC 761
Query 539 TGGGTAACAGGCTGGGGATTACGACTGTGGTATCAACTGACTCAATAAGGCACATGATGA 598
|||||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 762 TGGGTAGCAGGTTGGGTATTACGACTGTGGTATCAACTGACTCTATAAGGCACATGATGA 821
Query 599 GGAGCTTTGCTGATGAGAAGCAGAATCCTTTGCTGTGGGCTTCAACATACCATGCTGGAG 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 822 GGAGCTTTGCTGATGAGAAGCAGAATCCTTTGCTGTGGGCTTCAACATACCATGCTGGAG 881
Query 659 AGTACCTTGACCCTGTGGCAGTAGCTGAGTCaaaagccaaaagaaaagccaaaaagTTGA 718
|||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||
Sbjct 882 AGTACCTTGACCCTGTGGCAGTTGCCGAGTCAAAAGCCAAAAGAAAAGCCAAAAAACTGA 941
Query 719 AAGGCTCTCGAGGTGTAAATTCCAATACCCAAAAGACGGATGCTGGATCAAACTCTGGCA 778
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct 942 AAGGCTCTCGAGGTGTAAACTCCAATGCCCAAAAGACGGATGCTGGATCAAACTCTAGCA 1001
Query 779 CCACTGAGCTATTAAGTCATAAGCAGATGGCTATAGAAGGCTATAAGGCACAAAGTGAGA 838
|||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1002 CCACTGAGTTGCTAAGTCATAAGCAGATGGCTATAGAAGGGTATAAGGCACAAAGTGAGA 1061
Query 839 TGGTGATTGACAGTCTCGATAGGCTCATTACAACTTGGGAAGAGAGGAAAGAGTCGGTAG 898
|||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct 1062 TGGTGATTGACAGTCTTGATAGGCTCATTACCACTTGGGAAGAGAGGAATGAGTCAGTAG 1121
Query 899 TCGTTGAAGGGGTTCACTTAAGCCTTAACTTTGTGATGGGACTGATGAAAAAGCACCCTT 958
|||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1122 TCGTTGAAGGAGTCCACTTAAGCCTCAACTTTGTGATGGGACTGATGAAAAAGCACCCTT 1181
Query 959 CGATTGTTCCCTTCATGGTATACATAGCCAACGAGGAGAAACAATTGGAACGGTTTGCAG 1018
||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |
Sbjct 1182 CGATTGTTCCCTTCATGGTATACATCGCTAACGAGGAGAAACACTTGGAACGGTTTGCTG 1241
Query 1019 TACGAGCCAAGTACATGACATTGGACCCAGCAAAGAATAAGTATGTAAAATATATACGTA 1078
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 TCCGAGCCAAGTACATGACATTGGACCCAGCAAAGAATAAGTATGTAAAATATATACGTA 1301
Query 1079 ACATCAGAACAATACAGGATTATCTATGTAAACGAGCTGACAAGCATCTCGTTCCTAAGA 1138
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1302 ACATCAGAACAATACAGGATTATCTATGCAAACGAGCTGACAAACATCTCGTTCCTAAGA 1361
Query 1139 TAAACAACACAAATGTCGACAAGAGCGTGGCTACAATCCACGCGACGGTCTTTGGTTGCC 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 TAAACAACACAAATGTCGACAAGAGCGTGGCTACAATCCACGCGACGGTCTTTGGTTGCC 1421
Query 1199 TGCGTAGACGTGAAACAGGAGAGAAGCTCTATGATACAACCACAAATACCGTTGCTGTTA 1258
|||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||
Sbjct 1422 TGCGTAGACGTGAAACTGGAGAGAAGCTCTATGATACAACCACAAACACCGTTTCTGTTA 1481
Query 1259 TCGACGATGAGCACAGGAACCAATGTACAGCCAATTCATTAAGTTCCAAGGGAATGTTTC 1318
| ||||| ||||| |||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1482 TTGACGACGAGCATAGGAACCAATGTGCAGCCAATTCATTAACTTCCAAGGGAATGTTTC 1541
Query 1319 AGCTGATCCAAAGACAAGGCTCCTCTAGGCG-TTATATGGCTCTTTGCAATACTGATGGT 1377
|| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 1542 AGGTGATCCAAAGACAAGGCTCCTCTAGGCGATT-TATGGCTCTTTGCAATACTGATGGT 1600
Query 1378 ACTGTGGCCAGAACTTGGCCTGTTGGTTCCGTTGATAAGATCAGGAAGCCCGTCGTTG-A 1436
|| || || | |||||||||||||| |||||||| |||||||||||||||||||| || |
Sbjct 1601 ACGGTAGCAAAAACTTGGCCTGTTGCTTCCGTTGGTAAGATCAGGAAGCCCGTCG-TGAA 1659
Query 1437 TACTGAGATGGGTAATGGAACAGAGCATCAGCTACATAAAGCTGAACCTGTGAATCTTCA 1496
||||||||||| | |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1660 TACTGAGATGGATGATGGAACAGAGCATCAACTACATAAAGCTGAACCAGTGAATCTTCA 1719
Query 1497 GTTCGGTCACTTTGGGATCAGCGCTTGGCCTAGTGATGGCGCAACTAGCCATGCCGGGAG 1556
|| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1720 ATTTGGTCACTTTGGGATCAGCGCTTGGCCTAGTGATGGCGCAACTAGCCACGCCGGGAG 1779
Query 1557 TGTGGATGAATCAAGAGCAGATAATATTGAAACTGGAAGCAGGCATTACTCTTCTTGCTG 1616
||||||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 1780 TGTGGATGACTTAAGAGCAGATATTATTGAAACCGGAAGCAGGCATTACTCTTCTTGCTG 1839
Query 1617 CAGTTCGCCACGGACATCTGATGGGCCTTCAAAAGAGCTGATGGAGGAGCAGTCTGTAG- 1675
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1840 CAGTTCGCCTCGGACATCTGATGGGCCTTCAAAAGAGCTGATGGAGGAGCAGTCTGT-GA 1898
Query 1676 ATGGGAGCGATG-A-A-GATGAAGAAGGCGATGATGATTTTCCTGAGCCAGATTCTGATG 1732
|||||||||||| | | |||||||||||||| |||||||||| |||||| ||||||||||
Sbjct 1899 ATGGGAGCGATGAAGATGATGAAGAAGGCGACGATGATTTTCATGAGCCTGATTCTGATG 1958
Query 1733 AAGATCTCAGAGATAACAATGATGAACGCAACCGTGACGAGGTTGGATCGGTGGATGAGG 1792
|||||||||| ||||||||||| || |||||||| |||||| ||||||||||||||||||
Sbjct 1959 AAGATCTCAGCGATAACAATGACGAGCGCAACCGCGACGAGATTGGATCGGTGGATGAGG 2018
Query 1793 AATCGACAAAGTCAGATGAAGAGTACGATGATCTGGCAATGGAAGACAAGAGTTACTGGA 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2019 AATCGACAAAGTCAGATGAAGAGTACGATGATCTGGCAATGGAAGACAAGAGTTACTGGA 2078
Query 1853 CAGACAACGAAGAAGAAGAGTCTCGAGACACAATCTCCATGGTGTC-CAAAAACAACCAC 1911
||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||
Sbjct 2079 CAGACAACGAAGAAGAAGAGTCTCGAGACACAATCTCCATGGTATCGCAAAA-CAACCAC 2137
Query 1912 AACGAGGCTACAAAG-CCTTACAAAGATGACAAATACTCCCAAAACCTCGATCTTTTCCT 1970
||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2138 AACGAGGCTTCAAAGACCA-ACAAAGATGACAAATACTCCCAAAACCTCGATCTTTTCCT 2196
Query 1971 CAGGACCGCGAACCAGCCATTAATTGAATCCTTTGAGCTGTCGAGTGAATACGGGAACAG 2030
|| ||| ||||||||||||| | ||||||| ||||||| ||||||||||| | |||||
Sbjct 2197 CAAGACAACGAACCAGCCATTGACTGAATCCCTTGAGCTCACGAGTGAATACAGAAACAG 2256
Query 2031 AATGGGAGTAGCCGACTCGGATAAAGCCAAGATGAGGAAACGTTCACTTAGTATTCCGGC 2090
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2257 AATGGGAGTAGCCGCCTCGGATAAAGCCAAGATGAGGAAACGTTCACTTAGTATTCCGCC 2316
Query 2091 TGTTGGGAAACATCGTTCAATCATTGATGACCAGATTTTGGCTAACCAGACTGATCCAGT 2150
||| ||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 2317 TGTCGGGAAACATGGTTCAATCATAGATGACCAGATTTTGGCTAACCAGACTGATTCAGT 2376
Query 2151 TCTCTA 2156
|||||
Sbjct 2377 ACTCTA 2382
> AT5G60760.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:24438271-24442287
FORWARD LENGTH=2598
Length=2598
Score = 1155 bits (625), Expect = 0.0
Identities = 1508/1912 (79%), Gaps = 150/1912 (8%)
Strand=Plus/Plus
Query 72 TGGAGATGATTCGTTTCGTTACACGCGTCCTGTTTTGCAGAGTACTCTTCAGCTTATGGG 131
|||| | ||||||||| | || || |||||||||||||||||||||||||||||||||||
Sbjct 186 TGGA-AAGATTCGTTTAGGTATACACGTCCTGTTTTGCAGAGTACTCTTCAGCTTATGGG 244
Query 132 TTGCAAAGCTCGTCACGCCTTCAAGATCAGCCAAAGGGTTTTTGAGTTAATAAGAAGCGA 191
|||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| ||
Sbjct 245 ATGCAAAGCCCGTCACGCCTTCAAGATTAGCCGCAGGGTGTTTGAGTTAATAAGAAGTGA 304
Query 192 GGG-------AT-C-TTGT-AATAGC--TCACCAGAGAATGGGAAGGAAACTGAATTTAC 239
||| || | || | | || || || | || | || ||| |||||||| |
Sbjct 305 GGGATCTTTAATCCTTTCTCCCTCGCTTTCGCCCTCGCATAGTAAAGAATCTGAATTT-C 363
Query 240 TA-AGGA-AGTTGGTGGTTCAACTTGTG-T-A-G-AG-AAA--CTTAAC--TGTT---TG 285
| | || || || || |||| |||||| | | | || ||| | |||| ||| |
Sbjct 364 -AGAAGACAGGTGATGCTTCAGCTTGTGCTAATGTAGAAAAGGC-TAACAAAGTTAACAG 421
Query 286 GTT-GCTGATGATGTTGATGTTGACAAGAATAAAAGTAAACCGTTTGAGATGTACAAAAG 344
|| ||| | || ||||||||| |||| ||||||||| ||||||||| ||||||||||
Sbjct 422 TTTGGCT-A--CTGATGATGTTGATAAGAGTAAAAGTAAGCCGTTTGAGGTGTACAAAAG 478
Query 345 GCGGACAACTGTTGTTGTTTCACGGGAAATATTCT-TGGATGTTGTGTGTGATGCCCTGG 403
||| ||||| ||||||||||| || |||||||| | | | ||||| |||||||||||||
Sbjct 479 GCGAACAACCGTTGTTGTTTCTCGTGAAATATT-TGTAAACGTTGTCTGTGATGCCCTGG 537
Query 404 CTGAGTATAAGTACGTTGGTCGCGACCAAAGGGCAGATTTGATTCTGGCATGCAGAATCC 463
||||||| ||||| || |||| |||||||||||||| ||||||||| | ||||||||||
Sbjct 538 CTGAGTACAAGTATGTGGGTCATGACCAAAGGGCAGACTTGATTCTGTCGTGCAGAATCC 597
Query 464 GAGAAAGGAAAGAATCTGTAACTGTTTTGCTCTGTGGCACCAGTGGCTGTGGTAAATCTA 523
||||||||||||||||||| |||||| | || || || || ||||||||||| |||||||
Sbjct 598 GAGAAAGGAAAGAATCTGTGACTGTTCTACTGTGCGGTACTAGTGGCTGTGGCAAATCTA 657
Query 524 CATTGTCTGCA-TTGCTGGGTAA-CAGGCTGGGGATTACGACTGTGGTATCAACTGACTC 581
|| | || ||| || ||||| || ||||| |||||||| || ||||| ||||| |||||
Sbjct 658 CACTCTCCGCACTT-CTGGG-AAGTAGGCTTGGGATTACAACGGTGGTCTCAACCGACTC 715
Query 582 AATAAGGCACATGATGAGGAGCTTT-GCTGATGAGAAGCAGAATCCTTTGCTGTGGGCTT 640
||| | |||||||||||||| ||| | |||||| ||||||||||||||||| |||||||
Sbjct 716 AATCCGTCACATGATGAGGAG-TTTCGTTGATGAAAAGCAGAATCCTTTGCTATGGGCTT 774
Query 641 CAACATACCATGCT-G-GAG-A--GT-A-CCT-TGAC-CCTG-TG-G-CAGTAG-CTG-A 686
|||||||||||||| | ||| | | | ||| || | || || | || || | | |
Sbjct 775 CAACATACCATGCTGGAGAGTACCTTGACCCTGTGGCAGTTGCTGAGTCAAAAGCCAGAA 834
Query 687 GTCa-aa-agcc---aaaa--ga-a--a---a-g-ccaaaaagTTGAAAGGCTCTCG-AG 730
| | || |||| |||| || | | | | | |||||| ||||| |||| | ||
Sbjct 835 G-AAGAAGAGCCAAAAAAATGGATAGTATTGAGGACGAAAAAG-CGAAAGCCTCT-GAAG 891
Query 731 GT-GTAA--ATTCCAATACCCAAAAGACGGATGCTGGATCAAAC-TCTGGCACCACTG-A 785
|| | || | ||||| ||| |||| |||| |||||| ||| |||| ||| |
Sbjct 892 GTGGGAAGGCTAAGAATACTCAACAGACTGATGTTGGATC-AACAAAAAACACCCCTGTA 950
Query 786 GCTATTAAGTCATAAGCAGATGGCTATAGAAGGCTATAAGGCACAAAGTGAGATGGTGAT 845
| ||||||| ||||| |||||| ||||||| | |||||| |||||||| ||||| ||
Sbjct 951 -TTGTTAAGTCCCAAGCAAATGGCTGTAGAAGGATTTAAGGCTCAAAGTGAAATGGTTAT 1009
Query 846 TGACAGTCTCGATAGGCTCATTACAACTTGGGAAGAGAGGAAAGAGTC-GGTAGTCGTTG 904
||||| |||||||||||||||||| | |||||||| ||||||||||| | || | ||||
Sbjct 1010 TGACAATCTCGATAGGCTCATTACCGCATGGGAAGAAAGGAAAGAGTCTGTTA-TTGTTG 1068
Query 905 AAGGGGTTCACTTAAGCCTTAACTTTGTGATGGGACTGATGAAAAAGCACCCTTCGATTG 964
|||| || || |||||||| ||||||||||||||||||||||||||||| ||||| || |
Sbjct 1069 AAGGTGTCCATTTAAGCCTCAACTTTGTGATGGGACTGATGAAAAAGCATCCTTCTATAG 1128
Query 965 TTCCCTTCATGGTATACATAGCCAACGAGGAGAAACAATTGGAACGGTTTGCAG-TACGA 1023
|||| |||||||||||||| || |||||||||||||| |||||||| ||||||| || ||
Sbjct 1129 TTCCTTTCATGGTATACATCGCAAACGAGGAGAAACATTTGGAACGATTTGCAGTTA-GA 1187
Query 1024 GCCAAGTACATGACATTGGACCCAGCA-AAGAATAAGTATGTAAAATATATACGTAACAT 1082
|| ||||||||||| ||||||||| | || || ||||||||||||||||||||||||||
Sbjct 1188 GCTAAGTACATGACCCTGGACCCAG-AGAAAAACAAGTATGTAAAATATATACGTAACAT 1246
Query 1083 CAGAACAATACAGGATTATCTA-TGTAAACGAGCTGACAAGCATCTCGTTCCTAAGATAA 1141
|||||||||||||||||| || ||||||||||||||||| |||||||| || |||||||
Sbjct 1247 CAGAACAATACAGGATTA-CTTGTGTAAACGAGCTGACAAACATCTCGTCCCCAAGATAA 1305
Query 1142 ACAACACAAATGTCGACAAGAGCGTGGCTACAATCCACGCGACGGTCTTTGGTTGCCTGC 1201
|||| || |||||||||||||| |||||| | |||||||| || ||||| |||||||||
Sbjct 1306 ACAATACCAATGTCGACAAGAGTGTGGCTGCGATCCACGCTACAGTCTTCAGTTGCCTGC 1365
Query 1202 GTAGACGTGAAACAGGAGAGAAGCTCTATGATACAACCACAAATACCGT-TGCTGTTATC 1260
|||| || ||| |||||||| | ||||||||| | || |||||||| || | | || ||
Sbjct 1366 GTAGGCGAGAAGCAGGAGAGCATCTCTATGATGCTACTACAAATACTGTCT-CAGTGATT 1424
Query 1261 GACGATGAGCACAGGAACCAATGTACAGCCAATTCATTAAGTTCCAAGGGAATGTTTCAG 1320
||||||||| | || ||||| |||||||| |||||||| || ||||| ||||||||||||
Sbjct 1425 GACGATGAGTATAGAAACCAGTGTACAGCTAATTCATTGAGCTCCAAAGGAATGTTTCAG 1484
Query 1321 CTGATCCAAAGACAAGGCTCCTCTAGGCGT-TATATGGCTCTT-TGCAATACTGATGGTA 1378
|||||||||||| |||| || ||||||| | | |||||||||| | |||||||||||| |
Sbjct 1485 CTGATCCAAAGAAAAGGTTCTTCTAGGCATCT-TATGGCTCTTCT-CAATACTGATGGCA 1542
Query 1379 CTGTGGCCAGAACTTGGCCTGTT---GGTTCCGTTGATAAGA-TCAGGAA-GCCCGTCGT 1433
|| | || ||||||||||| ||| ||| || ||| ||| | |||| ||| ||| |
Sbjct 1543 CTTTCGCAAGAACTTGGCCCGTTACTGGTAAGGTCGATGAGAGT--GGAAAGCCAGTCTT 1600
Query 1434 T-GATACTGAGATG---G--GTAA-TGGAACAGAGCA-----TC-A-G----C-TACATA 1474
| | || ||||||| | | || ||||| ||||| || | | | |||| |
Sbjct 1601 TTG-TAATGAGATGATTGAAGAAAATGGAATGGAGCACCCGGTCTATGGATACCTACAGA 1659
Query 1475 AAGCTGAACCTGTGAATCTTCAGTTCGGTC-ACTTTGGGATCAGCGCTTGGCCTAGTGAT 1533
|||||||||| |||||||||||||| |||| | ||||||||||| |||||||||||||||
Sbjct 1660 AAGCTGAACCGGTGAATCTTCAGTTTGGTCTA-TTTGGGATCAGTGCTTGGCCTAGTGAT 1718
Query 1534 GGCGCAACTAGCCATGCCGGGAGTGTGGATGAATC-AAGAGCAGATAATAT-TGAAACTG 1591
|| || ||||||| || |||||||| ||||| | || ||| || | | ||||||
Sbjct 1719 GGAGCCACTAGCCGCGCTGGGAGTGTAGATGACTGTAA-AGCTGACA-TGGCTGAAACCA 1776
Query 1592 GAAG-CAGGCATTACTCTTCTTGCTGCAGTTCGCC-ACGGACATCTGATGGGCCTTCAAA 1649
| || | || ||||||||||||||||||| ||||| | ||| ||||| || |||| ||
Sbjct 1777 GCAGTC-GGTATTACTCTTCTTGCTGCAGCTCGCCTA-GGATGTCTGAAGGAACTTCTAA 1834
Query 1650 AGAGCTGATGGAGGAGCAGTCTGTAGATGGGAGCGATGAAGATGAAGAAGGCGATGATGA 1709
|||||| | |||||| ||||| || |||||||||||||||| | | ||| |||||
Sbjct 1835 AGAGCTTAAGGAGGATCAGTCAGTCCATGGGAGCGATGAAGA--A-GT---CGAGGATGA 1888
Query 1710 TTTTCCTGAGCCAGATTCTGATGA-AGATCTCAGAGATAACAATGATGAACGCAACCGTG 1768
| ||| ||||||||| | ||| || | | |||||||| | || | | || ||
Sbjct 1889 TCCTCCCGAGCCAGATACAGATTTTAGCGATGAC-GATAACAA-GC-GA--G-A-CCATG 1941
Query 1769 ACGAGGTTGGATCGGTGGATGAGGAATCGACAAAGTCAGATGAAGAGTACGATGATCTGG 1828
||||||| || ||||| |||||| |||| |||||||||||||| |||||||||||||| |
Sbjct 1942 ACGAGGTGGGTTCGGTTGATGAGCAATCAACAAAGTCAGATGAGGAGTACGATGATCTTG 2001
Query 1829 CAATGGAAGACAAGAGTTACTGGACAGACAACGAAGAAGAAGAGTCTCGAGA 1880
| ||||||||||| || ||||||||||| ||||| |||||||| |||||
Sbjct 2002 CTATGGAAGACAAAAGCTACTGGACAGAT---GAAGAGGAAGAGTCACGAGA 2050
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106977361395
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5