BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323231
Length=1677
Score E
Sequences producing significant alignments: (Bits) Value
AT3G45650.1 | Symbols: NAXT1 | nitrate excretion transporter1 |... 2632 0.0
AT3G45660.1 | Symbols: | Major facilitator superfamily protein... 1838 0.0
AT3G45710.1 | Symbols: | Major facilitator superfamily protein... 409 5e-113
> AT3G45650.1 | Symbols: NAXT1 | nitrate excretion transporter1
| chr3:16759253-16761266 FORWARD LENGTH=1677
Length=1677
Score = 2632 bits (1425), Expect = 0.0
Identities = 1595/1679 (95%), Gaps = 4/1679 (0%)
Strand=Plus/Plus
Query 1 ATGGCTAGTTCAGTTACAGGCGATGCGGAAACAGTGATATCAGCAGATTCAAGCACCAAA 60
||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||
Sbjct 1 ATGGCTAGTTCAGTTACTGGCGATGCAGAAACAGCGATATCAGCAGATTCAAGCACCAAA 60
Query 61 CGCAGCGGTGGAGGTTGGATCACTTTTCCGTTTATGATAGTTACGTTGTTAGGCTTGACA 120
||| | |||||||||||||| || |||||||||||||||| |||||||||||||||||||
Sbjct 61 CGCCGTGGTGGAGGTTGGATTACCTTTCCGTTTATGATAGCTACGTTGTTAGGCTTGACA 120
Query 121 ATAGCTGCGTGGGGTTGGTTACTTAACTTGATCGTCTACTTGATTGAGGAATTCAACGTG 180
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct 121 ATAGCTGCGTGGGGTTGGTTACTTAACTTGATCGTCTACCTGATCGAGGAATTCAACGTG 180
Query 181 AAGAGCATCGCAGCGGCTCAGATTGCTAACATTGTTAGTGGTTGTATCTGTATGGTTCCA 240
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 181 AAGAGCATTGCAGCGGCTCAGATTGCTAATATTGTTAGTGGTTGTATCTGTATGGTTCCA 240
Query 241 GCTATGGCAGCCATTGCATCTGACTCTTTCTTTGGAACCATTCCTGTTATCTCAGTTTCA 300
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GCTGTTGCAGCCATTGCATCTGACTCTTTCTTTGGAACCATTCCTGTTATCTCAGTTTCA 300
Query 301 GCTTTCATTTCTCTTATGGGCGTAGCTCTGCTGACTCTAACCGCTTCGCTTGACTCTTTA 360
|||||||||||||||||||| |||||||| ||||||||||| ||||| |||||| |||||
Sbjct 301 GCTTTCATTTCTCTTATGGGTGTAGCTCTACTGACTCTAACTGCTTCACTTGACACTTTA 360
Query 361 AGACCTAGAGCCTGTGAAACAGCTTCAAGCCTATGCCAGTCTCCTTCGAAAACCCAGCTC 420
||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 361 AGACCTAGACCCTGCGAAACAGCTTCAATACTATGCCAGTCTCCTTCGAAAACCCAGCTC 420
Query 421 GGAGTTCTTTACACGGCCATAACTCTAGCCTCTATAGGAACAGGTGGGACACGGTTCACA 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GGAGTCCTTTACACGGCCATAACTCTAGCCTCTATAGGAACAGGTGGGACACGGTTCACA 480
Query 481 TTAGCAACTGCTGGTGCGAACCAGTATGAAAAAACTAAAGACCAAGGAAGCTTTTTCAAC 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TTAGCAACTGCTGGTGCGAACCAGTATGAAAAAACTAAAGACCAAGGAAGCTTTTTCAAC 540
Query 541 TGGTTTTTCTTCACTACGTATCTTGCCGGAGCTATAAGTGCAACCGCCATTGTCTACACT 600
|||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 541 TGGTTTTTCTTCACAACATATCTAGCCGGAGCTATAAGTGCAACCGCCATTGTCTACACC 600
Query 601 GAAGACAACATCAGCTGGACC-TTGGGGTTTGGTCTGTCCGTAGCTGCTAACCTCTTCAG 659
|||||||| |||||||||||| ||||| ||||||||||| ||||| ||||| |||||||
Sbjct 601 GAAGACAATATCAGCTGGACCCTTGGG-TTTGGTCTGTCTGTAGCCGCTAATTTCTTCAG 659
Query 660 TTTTTTGGTTTTCATCTCGGGGAAAAGATTCTACAAGCACGACAAGCCTTTGGGAAGTCC 719
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 660 TTTTTTGGTTTTCGTCTCGGGGAAAAGATTCTACAAGCATGACAAGCCTTTGGGAAGTCC 719
Query 720 CTTCACAAGTCTACTATGCGTCATTTTCGCCGCGGTACGCAAAAGAAAAGCTGTGGTTTC 779
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 720 CTTCACAAGTCTACTATGCGTCATTTTCGCAGCATTACGCAAAAGAAAAGCTGTGGTTTC 779
Query 780 CACCAACGAAAAAGACTACCACAATGAATCTATCACAATGCCCACAAAGAGTTTCAGGTT 839
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 780 CACCAACGAAAAAGACTACCACAATGAATCAATCACAATGCCCACAAAGAGTTTCAGGTT 839
Query 840 CTTTAACCGTGCAGCGTTGAAACAAGAAGACGAGGTTAAACCAGACGGCACAATTCGTAA 899
||||||||||||||| |||||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct 840 CTTTAACCGTGCAGCATTGAAACAGGAAGACGAGGTAAAACCAGATGGCACAATTCGCAA 899
Query 900 TCCCTGGAGACTATGCAGCGTTCAACAAGTAGAAGATTTCAAAGCAGTCATAAGAATTAT 959
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 900 TCCATGGAGACTATGCAGCGTTCAACAAGTGGAAGATTTCAAAGCAGTCATAAGAATCAT 959
Query 960 CCCTCTTGCGTTAGCTACAATATTCTTAAGCACTCCAATCGCAATGCAGCTAAGCTTAAC 1019
|||||| || ||||| ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 960 CCCTCTCGCCTTAGCCACAATATTCTTGAGCACTCCAATCGCAATGCAACTAAGCTTAAC 1019
Query 1020 AGTTCTTCAAGGTCTGGTGATGGACCGGAGGCTTGGCCCTAGCTTCAAAATCCCTGCAGG 1079
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1020 AGTTCTTCAAGGTCTGGTGATGGACCGGAGGCTTGGTCCTAGCTTCAAAATCCCTGCAGG 1079
Query 1080 CTCTCTCCAAGTCATAACACTTCTCTCCACTTGCCTATTTATCATAGTCAATGATCGGTT 1139
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |
Sbjct 1080 CTCTCTCCAAGTCATAACACTTCTCTCCACTTGCCTATTTATCATAGTCAACGATAGGGT 1139
Query 1140 TCTCTATCCATTTTACCAAAAGTTAACGGGAAAGTTCCTTACACCGCTCCAACGAGTCGG 1199
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||
Sbjct 1140 TCTCTATCCATTTTACCAAAAGTTAACGGGAAAGCACCTCACACCGCTCCAACGAGTTGG 1199
Query 1200 TATAGGCCATGCTTTCAACATTCTAAGCATGGCCGTGACTGCCATAGTTGAAGCAAAGCG 1259
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1200 GATAGGCCATGCGTTCAACATTCTAAGCATGGCTGTGACTGCCATAGTTGAAGCAAAGCG 1259
Query 1260 ATTGAAGATAGTACAGAAGGGTCATTTTCTCGGATCATCATCCGTTGCTGACATGTCAGT 1319
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1260 ATTAAAGATAGTACAGAAGGGTCATTTTCTCGGATCATCATCTGTTGCTGACATGTCAGT 1319
Query 1320 CTTGTGGCTCTTCCCACCTCTAGTCATAGTAGGAATTGGAGAGGCCTTCCATTTCCCAGG 1379
||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1320 CTTATGGCTCTTCCCTCCTCTAGTCATAGTAGGAATCGGAGAGGCCTTCCATTTCCCAGG 1379
Query 1380 GAATGTAGCTCTGTGCTATCAAGAGTTTCCAGAGTCTATGAGAAGCACCGCAACATCGAT 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 GAATGTAGCTCTGTGCTATCAAGAGTTTCCAGAGTCTATGAGAAGCACCGCAACATCGAT 1439
Query 1440 TACCTCGGTGGTGATTGGGATATGTTTCTACACAAGCACTGCTTTGATTGATCTGATTCA 1499
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1440 AACCTCGGTGGTGATTGGGATATGTTTCTACACAAGCACTGCTTTGATAGATCTGATTCA 1499
Query 1500 GAGGACCACCGCGTGGTTACCAGATGACATTAACCACGGAAGAGTTGACAATGTTTACTG 1559
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1500 AAGGACCACGGCGTGGTTACCAGATGACATAAACCATGGAAGAGTTGACAATGTTTACTG 1559
Query 1560 GGTTTTAGTAATTGGAGGAGTCTTGAATCTTGGCTATTTTCTTGTGTGTTCTTTGGTT-T 1618
| ||||||| || |||||||||||||||||||||||||||||||||||||||| || | |
Sbjct 1560 GATTTTAGTCATAGGAGGAGTCTTGAATCTTGGCTATTTTCTTGTGTGTTCTT-GGCTAT 1618
Query 1619 ACAGATACAGAAACCTCAAGGATGATGATCATGAGCAATCTGCAAATGTCTCTCACTGA 1677
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1619 ACAGATACAGAAACCTCAAGGATGATGATCATAAGCAAGCTGCAAATGTCTCTCACTGA 1677
> AT3G45660.1 | Symbols: | Major facilitator superfamily protein
| chr3:16762205-16764241 FORWARD LENGTH=1674
Length=1674
Score = 1838 bits (995), Expect = 0.0
Identities = 1466/1692 (87%), Gaps = 37/1692 (2%)
Strand=Plus/Plus
Query 1 ATGGCTAGTTCAGTTACAGGCGATGCGGAAACAGTGATA-TCAGCAGATTCAAGCACCAA 59
||| || |||||||| | ||||||| ||| | ||| | ||||||||||| |||||||
Sbjct 1 ATGTCTGGTTCAGTTTCCCGCGATGCAGAAGCTCTGA-AGTCAGCAGATTCTAGCACCAG 59
Query 60 ACGCAGCGGTGGAGGTTGGATCACTTTTCCGTTTATGATAGTTACGTTGTTAGGCTTGAC 119
|||| | ||| || ||||||| || |||||||||||||| |||||||| ||| | ||
Sbjct 60 ACGC-TC--TGGCGGCAGGATCACCTTCCCGTTTATGATAGTAACGTTGTTCGGCCTAAC 116
Query 120 AATAGCTGCGTGGGGTTGGTTACTTAACTTGATCGTCTACTTGATTGAGGAATTCAACGT 179
| ||||| ||| ||| ||||||| |||||||| |||||| |||| || || | |||| |
Sbjct 117 ATTAGCTACGTTGGGATGGTTACAGAACTTGATTGTCTACCTGATCGAAGAGTACAACAT 176
Query 180 GAAGAGCATCGCAGCGGCTCAGATTGCT-AACATTGTT-AGTGGTTGTATCTGTATGGTT 237
||||||||||||||| || ||||| || |||||| || ||||||| || || ||| |||
Sbjct 177 GAAGAGCATCGCAGCTGCGAAGATT-CTCAACATT-TTCAGTGGTTTTACCTTTAT-GTT 233
Query 238 -CCAGCTA-TGGCAGCCATTGCATCTGACTCTTTCTTTGGAACCATTCCTGTTATCTCAG 295
|| || | ||| |||||||||| | || |||||||| ||||| ||||||||||||| |
Sbjct 234 CCCTGCCATTGG-AGCCATTGCAGCGGATTCTTTCTTCGGAACAATTCCTGTTATCTTGG 292
Query 296 TTTCAGCTTTCATTTCTCTTA-TGGGCGTAGCTCTGCTGACTCTAACCGCTTCGCTTGAC 354
||||| | |||||||||| || ||||||||| ||||||| |||||||| ||| | |||||
Sbjct 293 TTTCATCATTCATTTCTC-TAGTGGGCGTAGTTCTGCTGGCTCTAACCACTTTGTTTGAC 351
Query 355 TCTTTAAGA-CCTAGAGCCTGTGAAACAGCTTC-AAGCCTATG-CCAGTCTCCTTCGAAA 411
||||||||| || | |||||| |||||||| || ||| |||| | || | ||| ||||
Sbjct 352 TCTTTAAGACCCCA-AGCCTGCGAAACAGCATCAAAG-TTATGTCAAG-CCCCTACGAAC 408
Query 412 ACCCAGCTCGGAGTTCTTTACACGGCCATAACTCTAGCCTCTATAGGAACAGGTGGGAC- 470
| ||||||||| || |||||||| || |||||||||| || | | ||| |||||||| |
Sbjct 409 ATCCAGCTCGGTGTCCTTTACACAGCAATAACTCTAGGCTGTGTGGGAGCAGGTGGG-CT 467
Query 471 ACGGTTCACATTAGCAACTGCTGGTGCGAACCAGTATGAAAAAACTAAAGACCAAGGAAG 530
|||||| || || || || ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 468 ACGGTTTACCTTGGCCACCGCTGGTGCGAACCAGTACGAAAAAACTAAAGACCAAGGCAG 527
Query 531 CTTTTTCAACTGGTTTTTCTTCACTA-CGTATCTT-GCCGGAGCTATAAGTGCAACCGCC 588
|||||||||||||||||||||||| | |||| || || | ||||||||||||| |||
Sbjct 528 CTTTTTCAACTGGTTTTTCTTCAC-ATGGTAT-TTAGCTGCCTCTATAAGTGCAACAGCC 585
Query 589 ATTGTCTACACTGAAGACAACATCAGCTGGACCTTGGGGTTTGGTCTGTCCGTAGCTGCT 648
||||||||| | ||||| ||||| ||||||| || ||||||||||||| |||||||||
Sbjct 586 ATTGTCTACGCCGAAGAAAACATTAGCTGGAGTTTCGGGTTTGGTCTGTGTGTAGCTGCT 645
Query 649 AACCTCTTCA-GTTTTTTGGTTTTCATCTCGGGGAAAAGATTCTACAAGCACGACAAGCC 707
|| || || | | || | ||||||||||||||||||| |||||||||||| ||||||||
Sbjct 646 AATCTGTT-AGGCTTGATAGTTTTCATCTCGGGGAAAAAATTCTACAAGCATGACAAGCC 704
Query 708 TTTGGGAAGTCCCTTCACAAGTCTACTAT-GCGTCATTTTCGCCGCGGTACGCAAAAGAA 766
|||||||||||||||||||||| |||| | | ||||| ||||| || |||| |||||||
Sbjct 705 TTTGGGAAGTCCCTTCACAAGTTTACT-TCGTGTCATCTTCGCTGCCATACGTAAAAGAA 763
Query 767 AAGCTGTGGTTTCCACCAACGAAAAAGACTACCACAATGAATCTATCACAATGCCCACAA 826
|||||||||||||||||||||| ||||||||||||| |||||| | | || ||||||||
Sbjct 764 AAGCTGTGGTTTCCACCAACGAGAAAGACTACCACAGTGAATCAAAGAAAACGCCCACAA 823
Query 827 AGAGTTTCAGGTTCTTTAACCGTGCAGCGTTGAAACAAGAAGACGAGGTTAAACCAGACG 886
|||||||||||||||||||||| ||||| |||||||| || || |||||||| ||||||
Sbjct 824 AGAGTTTCAGGTTCTTTAACCGCGCAGCATTGAAACAGGATGATGAGGTTAATTCAGACG 883
Query 887 GCACAATTCGTAATCCCTGGAGACTATGCAGCGTTCAACAAGTAGAAGATTTCAAAGCAG 946
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 GCACAATTCACAATCAATGGAGACTATGCAGCGTTCAACAAGTAGAAGATTTCAAAGCAG 943
Query 947 TCATAAGAATTATCCCTCTTGCGTTAGCTACAATATTCTTAAGCACTCCAATCGCAATGC 1006
|||||||||| |||||||||| |||||||| | ||||||| |||||||||||||| ||||
Sbjct 944 TCATAAGAATCATCCCTCTTGTGTTAGCTATATTATTCTTGAGCACTCCAATCGCGATGC 1003
Query 1007 AGCTAAGCTTAACAGTTCTTCAAGGTCTGGTGATGGACCGGAGGCTTGGCCCT-AGCTTC 1065
||||| | |||||||| ||||| |||||||||||||||||||| ||||||||| | ||||
Sbjct 1004 AGCTAGGATTAACAGTACTTCAGGGTCTGGTGATGGACCGGAGACTTGGCCCTCA-CTTC 1062
Query 1066 AAAATCCCTGCAGGCTCTCTCCAAGTCATAACACTTCTCTCCACTTGCCTATTTATCATA 1125
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1063 AAGATCCCTGCAGGCTCTCTCCAAGTCATAACACTTCTCTCCACTTGCCTATTTATCATA 1122
Query 1126 GTCAATGATCGGTTTCTCTATCCATTTTACCAAAAGTTAA-CGGGAAAGTTCCTTACACC 1184
||||| |||||||||||||| |||||||||||||| ||| |||| ||||||| |||||
Sbjct 1123 GTCAACGATCGGTTTCTCTACCCATTTTACCAAAAACTAACCGGG-AAGTTCCCCACACC 1181
Query 1185 GCTCCAACGAGTCGGTATAGGCCATGCTTTCAACATTCTAAGCATGGCCGTGACTGCCAT 1244
| | ||| | || || |||||||| | ||||||||||||||||||||| |||||||||||
Sbjct 1182 GATTCAAAGGGTGGGAATAGGCCACGTTTTCAACATTCTAAGCATGGCTGTGACTGCCAT 1241
Query 1245 AGTTGAAGCAAAGCGATTGAAGATAGTACAGAAGGGTCATTTTCTCGGATCATCATCCGT 1304
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1242 AGTTGAAGCAAAGCGATTGAAGATAGTACAGAAAGGTCATTTTCTCGGATCATCATCTGT 1301
Query 1305 TGCTGACATGTCAGTCTTGTGGCTCTTCCCACCTCTAGTCATAGTAGGAATTGGAGAGGC 1364
|||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||
Sbjct 1302 TGCTGACATGTCAGTCTTGTGGTTATTCCCTCCTCTAGTCATAGTAGGAATCGGAGAGGC 1361
Query 1365 CTTCCATTTCCCAGGGAATGTAGCTCTGTGCTATCAAGAGTTTCCAGAGTCTATGAGAAG 1424
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1362 CTTCCATTTCCCAGGGAATGTAGCTCTGTGCTATCAAGAGTTTCCAGAGTCTATGCGAAG 1421
Query 1425 CACCGCAACATCGATTACCTCGGTGGTGATTGGGATATGTTTCTACACAAGCACTGCTTT 1484
|| || ||||| || ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1422 TACTGCGACATCAATAACCTCGGTGTTGATTGGGATATGTTTCTACACAAGCACTGCTTT 1481
Query 1485 GATTGATCTGATTCAGAGGACCACCGCGTGGTTACCAGATGACATTAACCACGGAAGAGT 1544
||| || |||||||| | |||||| || |||||||||||||| |||||||| ||||||||
Sbjct 1482 GATCGACCTGATTCAAAAGACCACTGCATGGTTACCAGATGATATTAACCATGGAAGAGT 1541
Query 1545 TGACAATGTTTACTGGGTTTTAGTAATTGGAGGAGTCTTGAATCTTGGCTATTTTCTTGT 1604
|||||||||||||||| ||||||| || |||||||||||||||||||||||||| |||||
Sbjct 1542 TGACAATGTTTACTGGATTTTAGTCATAGGAGGAGTCTTGAATCTTGGCTATTTCCTTGT 1601
Query 1605 GTGTTCTTTGGTTT-ACAGATACAGAAACCTCAAGGATGATGATCATGAGCAATCTGCAA 1663
|||||||| ||||| | | ||||||||||||| || ||| ||||||||| ||| |||||
Sbjct 1602 GTGTTCTT-GGTTTTATAAATACAGAAACCTCGAGAATGCTGATCATGAACAAGATGCAA 1660
Query 1664 ATGTCTCTCACT 1675
||||||||||||
Sbjct 1661 ATGTCTCTCACT 1672
> AT3G45710.1 | Symbols: | Major facilitator superfamily protein
| chr3:16782643-16784735 FORWARD LENGTH=1877
Length=1877
Score = 409 bits (221), Expect = 5e-113
Identities = 1226/1684 (73%), Gaps = 177/1684 (11%)
Strand=Plus/Plus
Query 64 AGCGGTGGAGGTTGGATCACTTTTCCGTTTATGATAGTTACGTTGTTAGGCTTGACAATA 123
||| |||| || ||||||||||| ||||| ||| ||||||| || |||||| || | |||
Sbjct 138 AGC-GTGGTGGCTGGATCACTTTACCGTTCATGCTAGTTACATTATTAGGCATGTCCATA 196
Query 124 GCTGCGTGGGGTTGGTTACTTAACTTGATCGTCTACTTGATTGAGGAATTCAACGTGAAG 183
|| | | || ||| | | ||||||||||||| |||||| ||||||||| || | |||
Sbjct 197 ACTTCTTTCGGATGGGGAATGAACTTGATCGTCTTCTTGATCGAGGAATTCCACATCAAG 256
Query 184 AGCATCGCAGCGGCTCAGATTGCTAACATTGTTAGT-G-GTTGTATCTGTATGGTT-CCA 240
| |||||| || ||||||||| | || |||| | | | |||| || || ||| ||
Sbjct 257 AACATCGCTGCTGCTCAGATTTCAAATGTTGTCAATGGAGTTG--TCAACAT-GTTACCT 313
Query 241 GCTATGGCAGCCATTGC-ATCTGACT-CTTTCTTT-GGAACCATTCCTGTTATCT-CAGT 296
| | | ||||||| | | | |||| | |||| ||| |||| |||||| || |||| ||
Sbjct 314 GTTGTTGCAGCCA-TCCTAGCTGATTCCTTT-TTTGGGAA-CATTCCCGTCATCTCCACC 370
Query 297 TTCAGCTTTCATTTCTCT-TATGG-GCGTAGCTCTGC-TGA-CTCTAACCGCTTCGCTTG 352
| || ||||||||||||| ||| | | |||| | ||| || ||| | | || |||
Sbjct 371 TCCA-CTTTCATTTCTCTGGCTGGAACCT--CTCT-CTTGACCT-TAATCACATC-TTTG 424
Query 353 -ACT-CTTTAAGACCTAGAGCC-TGTGAAACAGCTTCAAGCCTATGCCAGTCTCCTTCGA 409
||| ||| | | |||||| || |||||||| | |||| ||||||||||| || || |
Sbjct 425 AACTACTTGATG-CCTAGA-CCGTGTGAAACGGGGTCAATTCTATGCCAGTCGCCATC-A 481
Query 410 AAAC-CCAGCTCGGAGTTCTT-TACACGGCCATAACTCTAG-CCTCTATAGGAACAGGTG 466
|||| ||||| || | |||| || ||| || |||||| || || ||| ||| ||
Sbjct 482 AAACTACAGCTTGG-GATCTTGTATGTAGCCTTAGCTCTAGTGATC-ATTGGATCAGCTG 539
Query 467 GGACACGGTTCACATTAGCAACTGCTGGTGCGAACCAGTATGAA-AAAACTAAAGACCAA 525
|||| |||||||| || ||| | || ||||||||||| ||| || || ||||||| |||
Sbjct 540 GGACGCGGTTCACCTTGGCAGCCGCGGGTGCGAACCAATAT-AAGAAGCCTAAAGAACAA 598
Query 526 GGAAGCTTTTTCAACTGGTT-TTTCTT-CACTACGTATCTTGCCGGAGCTATAAGT-GCA 582
||||| || ||||||||||| || ||| |||| |||| || |||||||| | | |||
Sbjct 599 GGAAGATTCTTCAACTGGTTCTTCCTTGCACT--GTATATT---GGAGCTATTACTGGCA 653
Query 583 --ACCGCCATTGTCTACACTGAAGACAACAT-C-AGCTGG-ACCTTGGGGTTTGGTC--T 635
|| || ||||| || || ||||| | || | |||||| | ||| ||||| |||| |
Sbjct 654 CGACAGCGATTGTATATACACAAGAC-A-ATGCTAGCTGGAAACTT-GGGTTCGGTCTAT 710
Query 636 GT-CCGTAGCTGCTAACCTCTTCAGTTTTTTGGTTTTCATC-TCGGGGAAAAGATTCTAC 693
|| |||| ||||||| | ||||||| | ||||||||| ||||| |||||||||
Sbjct 711 GTGCCGT---TGCTAACTTGATCAGTTTCATCGTTTTCATCGCCGGGG-TTAGATTCTAC 766
Query 694 AAGCACGACAAGCCTTTGGGAAGTCCCTT-CACAAGTCTACT-ATGCGTCATTTTCGCCG 751
||||| ||||| || ||||||||| |||| ||||| | || || ||| |||| | |
Sbjct 767 AAGCATGACAAACCCTTGGGAAGT-CCTTATACAAG-C--CTGATCCGT-GTTTTAGTTG 821
Query 752 C-GGTAC---GCAAAAGAAAAGCTGTGGTTTC--CACCA-ACGAA-A--A--A-GACTA- 797
| | ||| | |||||||| || ||| |||| || | ||||| | | | | ||
Sbjct 822 CTGCTACAATG-AAAAGAAAGGCAGTGATTTCATCAAAAGACGAAGACTATCATCAATAT 880
Query 798 ---C-C---ACA-ATG--AA-TC-TAT-C-ACAATGCCCACAAAGAG-TTTCAGGTTCTT 842
| | | | | | || | ||| | ||||||||| | ||||| ||| ||||||||
Sbjct 881 GGTCTCGGGAAAGAGGCCAAGACTTATACTACAATGCCCTCCAAGAGCTTT-AGGTTCTT 939
Query 843 TAACCGTGCAGCGTTGAAACAA-GAAGACGAGGTTAAAC-C-AGACG-G-CACAATTCGT 897
||||||||||| || ||| || |||| || |||||| | || | | | ||| | |
Sbjct 940 GAACCGTGCAGCATT-AAAGAACAAAGAAGA-TTTAAACACGAGTGGTGACTCAAGTAAT 997
Query 898 AATC-CCTGGAGACTATGCAGC-GTTCAACAAGTAGAAGATTTCAAAG-CAGTCATAAGA 954
|| | ||||| |||||| | ||||| |||||||||| ||||||| || || | ||
Sbjct 998 AA-CATGTGGAGGCTATGC-TCTGTTCAGGAAGTAGAAGACTTCAAAGCCATTC-TCCGA 1054
Query 955 ATTATCCCTCT-TGCGTTAG-C-TACAATATTCTTAAGCACTCCAATCGCAATGCAGCTA 1011
|| | ||||| || | || | | | || ||| | |||||||| | ||| | || |
Sbjct 1055 CTTGTACCTCTCTG-GGCAGCCGT-C-ATGTTCCTCAGCACTCCCGTGGCAGTACAAATG 1111
Query 1012 AGCTTAACAGTTCTTCAAGGTCTGGTGATGGACCGGAGGCTTGGCCC-TAGCTTCAAAAT 1070
||| | || ||||| |||| | |||| |||||||| | ||| |||| | |||| || |
Sbjct 1112 AGCATGACGGTTCTCCAAGCTTTGGTCATGGACCGCAAACTTAGCCCGCA-CTTCGAAGT 1170
Query 1071 CCCTGCAGGCTCTCTCCAAGTCATAACACTTC-TCTCCACTTGCCTATTTATCATAG-TC 1128
| |||| || ||||| ||||||||| || || ||| ||| | |||||||| | ||
Sbjct 1171 CTCTGCCGGGTCTCTACAAGTCATAGTAC-TCGTCTTTGGTTGTGTCTTTATCAT-GCTC 1228
Query 1129 AATGATC-GGTTTC-TCTAT-CCATTTTACCAAAAGTTAA-CGGGAAAGTTC-CTTACAC 1183
|| | | || || ||||| ||| | ||||||||| ||| ||| ||| | || ||||
Sbjct 1229 AA-CAACTGG-ATCATCTATCCCA-TGTACCAAAAGCTAATCGGCAAA--CCACTGACAC 1283
Query 1184 CGCTCCAACGAGTCGGTATAGGCCATGCTTTCAACATTCTAAGCATGGCCG-TGA-CTGC 1241
| || |||| ||| || || || || | ||||| ||| |||||||||| || | | | ||
Sbjct 1284 CACTTCAACAAGTTGGGATCGGTCACGTTTTCACCATCCTAAGCATGG-CGAT-ATCAGC 1341
Query 1242 CATAGTTGAAGCAAAGCGATTGAAGATAGTACAGAAGGGTCATTTTCTCGGATCATCATC 1301
| || ||||||||| || |||| | ||| | || || | || | |||
Sbjct 1342 TGTTGTGGAAGCAAAGAGACTGAAAACAGTTGAAAATGG--A-------GG--C--CAT- 1387
Query 1302 CGTTGCTGACATGTCAGT-CTTGTGGCT-CTTCCCACCTCTAGTCATAGTAGGAATTGGA 1359
| | ||||||||| | | ||||| || || |||| || || || ||||| ||
Sbjct 1388 C----C---CATGTCAGTGC-TATGGCTAGTT-CCTGCTCTTGTGATGGTTGGAATAGGC 1438
Query 1360 GAGGCCTTCCA-TTTCCCAGGGAATGTAGCTCTGTGCTATCAAGAGTTTCCAGAGTCTAT 1418
||||| || || |||||| | |||||| || | | |||| ||| || || |||||| |
Sbjct 1439 GAGGCGTTTCATTTTCCC-GCGAATGTTGCAGTATTCTATGGAGAATTCCCTGAGTCTCT 1497
Query 1419 G-AGAAGCACCGCAACATCGATT-ACCTCGGTGGTGATTGGGATATGTTTCTACAC-AAG 1475
| |||| ||||||||| || ||| ||||| ||||||||||| || | |||||| | ||
Sbjct 1498 GAAGAA-CACCGCAACTTC-ATTGACCTCAGTGGTGATTGGAATCTCTTTCTA-TCTGAG 1554
Query 1476 CACTGCT-TTGATTGATC-TGATTCAGAGGACCACCGCGTGGTTACCAGATGACATTAAC 1533
||| ||| || || || | |||| || || |||||| ||||||||||| ||||||| |||
Sbjct 1555 CACAGCTGTT-ATCGA-CGTGATCCAAAGAACCACCTCGTGGTTACCAAATGACATAAAC 1612
Query 1534 CACGGAAGAGTTGACAATGTTTACTGGGTTTTAGTAATTGGAGGAGTCTTGAATCTTGGC 1593
|| ||||||||||||||||||||||||||| |||| || ||||||||||||||||| |||
Sbjct 1613 CATGGAAGAGTTGACAATGTTTACTGGGTTGTAGTCATAGGAGGAGTCTTGAATCTCGGC 1672
Query 1594 TATTTTCTTGTGTGTTCTTTGG-TTTACAGATACAGAAACCTCAAGGATGATGATCATGA 1652
||||| ||||| || || |||| |||||| ||||||||||||||||||||||||||||||
Sbjct 1673 TATTTCCTTGTCTGCTC-TTGGTTTTACAAATACAGAAACCTCAAGGATGATGATCATGA 1731
Query 1653 GCAA 1656
|||
Sbjct 1732 ACAA 1735
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82881099795
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5