BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323370
Length=2913
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1814 0.0
AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1786 0.0
AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1650 0.0
> AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17532648-17536059 FORWARD LENGTH=3324
Length=3324
Score = 1814 bits (982), Expect = 0.0
Identities = 1739/2097 (83%), Gaps = 81/2097 (4%)
Strand=Plus/Plus
Query 859 CTTGAGTTTATTGGTGCTTTGACTAATTTCACCCGA-CTACAAGTGTT-AGATGTTGGTG 916
||||| ||||||| | |||||||||||| ||||| | | ||| | || || |||||||
Sbjct 1018 CTTGAATTTATTGATTCTTTGACTAATTGCACCC-ATTTGCAACTCTTAAG-TGTTGGTT 1075
Query 917 ACAATAGGTTTGGCGGTGACTTGCCTACCTCCATTGCCAATCTGTCCACA-AACCTCATC 975
||| |||| |||| |||| ||||||||| |||||||||||| |||||||| || ||||||
Sbjct 1076 ACACTAGGCTTGGGGGTGCCTTGCCTACATCCATTGCCAATATGTCCACAGAA-CTCATC 1134
Query 976 TA-TTTAAGCTTTCa-aaaaaaTCGCATCTCTGGAAACATTCCCCATGACATTGGGAATC 1033
| ||||| | || | | ||| | | | | ||||| |||||| || || ||||||||||
Sbjct 1135 -AGTTTAAACCTT-ATAGGAAACCACTTTTTTGGAAGCATTCCTCAAGATATTGGGAATC 1192
Query 1034 TCATAAGCCTTCAATCACTTGGGTT--GAACGAGAATTTGTTGACAGGACCACTCCCAAC 1091
||||| |||| ||| |||| ||| ||| | ||| ||||||| ||||||||||||||
Sbjct 1193 TCATAGGCCTACAAAGACTTCAGTTGGGAA--AAAATATGTTGACCGGACCACTCCCAAC 1250
Query 1092 CTCTCTT-GGTAAGCTTTTAGGATTGGGGGAACTAAGTGT-TCATTCAAATAGAATGTCG 1149
||| || || |||||| || |||||||| | ||||| | | |||||||||| |||||
Sbjct 1251 TTCT-TTGGGAAAGCTTCTAAGATTGGGGTTATTAAGTCTAT-ATTCAAATAGGATGTCA 1308
Query 1150 GGAGAGATACCATCTTCTATAGGCAACATCACT-ATGTTACAAAGACTTTATTTGAACAA 1208
|||||||| ||||||| |||||||||| | ||| | ||| ||| ||| |||||| |||
Sbjct 1309 GGAGAGATTCCATCTTTTATAGGCAACCTAACTCA-ATTAGAAATACTATATTTGTCCAA 1367
Query 1209 CAATAGTTTTGAAGGAACTGTTCCTCCGAGTCTCGGTAATTCTAGGCAGC-TGCTAGATT 1267
|||||||||||| |||| |||||||||||||||||| || | ||| || | |||| ||||
Sbjct 1368 CAATAGTTTTGAGGGAATTGTTCCTCCGAGTCTCGGGAAGTGTAGTCA-CATGCTTGATT 1426
Query 1268 TACGGA-TGGGATATAATAAGTTGAATGGGACTATACCTAAAGAAATCATGCAAATCTCA 1326
|||| | |||| ||||| |||||||||||||||||||| || ||||| ||||||||| ||
Sbjct 1427 TACGCATTGGG-TATAACAAGTTGAATGGGACTATACCGAAGGAAATTATGCAAATCCCA 1485
Query 1327 ACCCTTGTTAACCT-AGGATTGTCAGCTAATTCATTGACCGGCTCTCTGCCAAATAATGT 1385
|||||||||||||| || | || || ||| || |||| ||||||||| |||||| || |
Sbjct 1486 ACCCTTGTTAACCTAAGCA-TGGAAGGTAACTCTTTGAGCGGCTCTCTACCAAATGATAT 1544
Query 1386 TGAAAGAT-TACAAAATCTTGTTGTGTTATCACTTG-GTAATAACAAATTGTTC-GGACG 1442
|| ||| | ||||||||||||| ||||||||| | || || || || ||| ||||
Sbjct 1545 TGGAAG-TCTACAAAATCTTGTAAAACTATCACTTGAG-AACAATAAGTT-TTCAGGAC- 1600
Query 1443 A-CTCCCAAAAACCTTGGGAAAATGTATCTCGTTGGAACAACTTTATCTGCAAGGAAATT 1501
| |||||| ||||||||||||| ||| || || |||||||||||| ||| ||||||||||
Sbjct 1601 ATCTCCCACAAACCTTGGGAAATTGTCTCGCGATGGAACAACTTTTTCTACAAGGAAATT 1660
Query 1502 CTTTTGACGGAG-ATATTCCAGATATAAGAGGGTTAATGGGTGTTAA-AAGAGTTGATTT 1559
||||||| |||| | |||||| ||||||||||||| ||||||| ||| ||||||||||||
Sbjct 1661 CTTTTGATGGAGCA-ATTCCAAATATAAGAGGGTTGATGGGTG-TAAGAAGAGTTGATTT 1718
Query 1560 GTCAAAAAATAATCTCTCTGGAAGTATACCTGGATATCTTGCAAACTTTTCCAAGCTGCA 1619
|||||| ||| |||| || ||||||||||||| |||| |||||||||| |||||| || |
Sbjct 1719 GTCAAACAATGATCTATCGGGAAGTATACCTGAATATTTTGCAAACTTCTCCAAGTTGGA 1778
Query 1620 GTATCTCAATCTATCTTTTAACAATTTTGAGGGGAAA-ATGCC-AACAGAAGG-AATATA 1676
||||||||||||||| ||||||||||| | |||||| |||| || |||| ||| |
Sbjct 1779 ATATCTCAATCTATCTATTAACAATTTT-ACGGGAAAGGTGCCTTCCA-AAGGAAAT-TT 1835
Query 1677 TAAGAA-TATGACTATTGTCTCAGTATTTGGAAACAAAGATCTATGTGGAGGCATCAGGG 1735
| |||| | | || || || | ||||||||||||||| | |||||||||||||||| ||
Sbjct 1836 TCAGAACTCT-ACAATAGTTTTTGTATTTGGAAACAAAAACCTATGTGGAGGCATCAAGG 1894
Query 1736 AGT-TGCAACTAAAGCCATGCCTCGTGGAAGCACCACCGA-TGGAGAGAAAACATTCCTC 1793
| | || |||||||||||||||||| ||| |||||| | |||||| ||| ||||||||
Sbjct 1895 A-TCTGAAACTAAAGCCATGCCTCGCCCAAGAACCACC-AGTGGAGACAAAGCATTCCTC 1952
Query 1794 TCATTTGAAGAGAGTTGTGATCGGT-GTCACCGTAGGCATAGCTTTGCTTTTGATATTGC 1852
|||||| |||| ||||| || | || | | |||||||||||||||| ||| | |||
Sbjct 1953 TCATTTAAAGAAAGTTGCAAT-TTTAGTAAGCATAGGCATAGCTTTGCTATTGCTGTTGG 2011
Query 1853 TCATAGCTTC-AT--TTGCTAT-ATGGTTCAGAAAAAGAAAGAATAATCAGCAGACTAAT 1908
|||||||||| || || || | |||||||||||||||| ||| || |||||||| |||
Sbjct 2012 TCATAGCTTCGATGGTT-CTGTGTTGGTTCAGAAAAAGAAGGAAGAACCAGCAGACAAAT 2070
Query 1909 AATCAAACTCCTTCCACTTTGGGTG-CCTTCCATGAAAAGATAAGCTATGGACATCTCCG 1967
|| | |||||| | || || | |||||||| ||||||||||||||| |||| ||
Sbjct 2071 AACCTGGTTCCTTCTAAGTT-GGAGATTTTCCATGAGAAGATAAGCTATGGAGATCTACG 2129
Query 1968 AAACGCGACAGATGGCTTCTCTTCGAGCAATATGGTTGGGTTAGGAAGTTTTGGTACTGT 2027
||| |||||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||
Sbjct 2130 AAATGCGACAAATGGCTTCTCTTCAAGCAATATGGTTGGGTCAGGTAGTTTTGGTACTGT 2189
Query 2028 GTTTAAGGCATTACTTCC-A-GCAGAGAAATATGTTGTTGGGGTGAAAGTTCTAAACATG 2085
||| |||||||| || || | | |||| || | |||||| ||||||||||||||||||
Sbjct 2190 GTTCAAGGCATTGCTCCCGACGGAGAGCAAGA--TTGTTGCAGTGAAAGTTCTAAACATG 2247
Query 2086 CAAAAACATGGAGCGATGAAGAGCTTTATGGCAGAGTGTGAATCCCTCAAGGACGTAAGG 2145
|| | || |||||| |||||||||||||||||||| ||||||||| | || ||| ||||
Sbjct 2248 CAGAGACGTGGAGCTATGAAGAGCTTTATGGCAGAATGTGAATCCTTGAAAGACACAAGG 2307
Query 2146 CATCGTAATCTTGTGAAACTT-TTGACGGCTTGTTCGAGTATTGATTTCCAAGGAAACGA 2204
|||||||||||||||||| || |||| ||||| | |||| ||||||||||||||||||
Sbjct 2308 CATCGTAATCTTGTGAAA-TTACTGACAGCTTGCGCTAGTACTGATTTCCAAGGAAACGA 2366
Query 2205 ATTCAGGGCTCTCATCTATGAGTTCATGCCGAATGGAAGCTTGGATATGTGGCTGCACCC 2264
|||||| || || |||||||||| | |||||||||||||| |||||||||||||||||||
Sbjct 2367 ATTCAGAGCGCTTATCTATGAGTACTTGCCGAATGGAAGCGTGGATATGTGGCTGCACCC 2426
Query 2265 AGAAGAAGTGGAAGAGATTCGTAGACCCTCAAGAACCTTGACACTTCTTGAAAGGCTCAA 2324
||| ||||| |||||||| ||||| ||| || ||||||||||||||||||||||||| ||
Sbjct 2427 AGAGGAAGTCGAAGAGATACGTAGGCCCCCACGAACCTTGACACTTCTTGAAAGGCTTAA 2486
Query 2325 CATTGCCATAGACGTGGCTTCAGTTTTAGACTATCTTCATGTTCATTGTCATGAGCCTAT 2384
|||| ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 2487 TATTGTCATAGACGTGGCTTCTGTTTTGGACTATCTTCATGTTCACTGTCATGAGCCTAT 2546
Query 2385 AGCTCATTGCGATCTTAAGCCAAGCAACGTCCTCCTAGACGATGATTTGACTGCTCATGT 2444
||||||||||||||| ||||||||||||||||| ||||| ||||||||||| || |||||
Sbjct 2547 AGCTCATTGCGATCTCAAGCCAAGCAACGTCCTTCTAGAAGATGATTTGACCGCCCATGT 2606
Query 2445 TAGTGATTTTGGTCTAGCTCGACTGCTCCTCAAATTCGACCAA-GAGTCCTTCCTCAATC 2503
||||||||||||||| ||||| || || ||||||||||| ||| ||||| ||||| || |
Sbjct 2607 TAGTGATTTTGGTCTGGCTCGGCTTCTACTCAAATTCGA-CAAGGAGTCATTCCTTAACC 2665
Query 2504 AACTCAGCTCCGCTGGCGTGAGAGGAACCATCGGTTATTG-CGCACCAGAATATGGAATG 2562
|||| ||||| || || || |||||||||||||| || || |||||||||||||||||||
Sbjct 2666 AACTAAGCTCAGCCGGAGTTAGAGGAACCATCGGCTA-TGCCGCACCAGAATATGGAATG 2724
Query 2563 GGAGGACAGCCATCAATACAAGGTGATGTGTATAGCTTTGGGGTTCTCCTTTTGGAAATG 2622
|||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 2725 GGAGGACAACCATCAATACATGGTGATGTGTATAGCTTTGGGGTTCTCCTTTTAGAAATG 2784
Query 2623 TTCACTGGAAAAAGACCAACTAATGAGCTATTTGGCGGAAACTTTACC-CTACACAGCTA 2681
||||| || ||| |||||||| ||||| ||||||| ||||| |||| | ||||| |||||
Sbjct 2785 TTCACCGGGAAACGACCAACTGATGAGTTATTTGGGGGAAA-TTTAACACTACATAGCTA 2843
Query 2682 CACCAAGTCT-GCGTTGCCGGAAAGAGTATTGGATGTTGCGGACGAATCCATTCTTCACA 2740
|||||||| | |||||||| |||| |||||| || |||| ||| || | ||||||||||
Sbjct 2844 CACCAAGT-TAGCGTTGCCAGAAAAAGTATTCGAAATTGCAGACAAAGCGATTCTTCACA 2902
Query 2741 TCGGTCTCCGAGTCGGTTTTCCA-ATTGTTGAGTGCTTGAAAttttttttCGAGGTGGGA 2799
| ||||| |||| ||||| || | || ||||||||||| | | |||| |||||||||
Sbjct 2903 TTGGTCTTAGAGTTGGTTT-CCGTACTGCTGAGTGCTTGACACTGGTTTTGGAGGTGGGA 2961
Query 2800 CTTATGTGCTGTGAAGAAGT-TCCAA-GCAACCGGCTGGCAATGAGTGAAGTTCTCAAG- 2856
|||| ||||||||||||| | ||| | | |||||| |||||| ||||||||| | |||
Sbjct 2962 CTTAGGTGCTGTGAAGAA-TATCCTACG-AACCGGTTGGCAACGAGTGAAGT-CGCAAAA 3018
Query 2857 GAATTAATCTCAATCAGAGAGAGGTTCTTCAGAGCCAGAAGAAAAGCTGGACGTTGA 2913
|| || |||||||||||||| |||||||| | | ||||||||| | || ||||||||
Sbjct 3019 GAGTTGATCTCAATCAGAGAAAGGTTCTTTAAAACCAGAAGAACACCTAGACGTTGA 3075
> AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17341512-17344645 REVERSE LENGTH=3030
Length=3030
Score = 1786 bits (967), Expect = 0.0
Identities = 1730/2090 (83%), Gaps = 85/2090 (4%)
Strand=Plus/Plus
Query 865 TTTATTGGTGCTTTGACTAATTTCACCCGA-CTACAAGTGTTAGATGTTG-GTGACAATA 922
||| ||| |||||||||||||| | ||| | | || | |||| || || || ||||||
Sbjct 985 TTTCTTGATGCTTTGACTAATTGCTCCC-ATTTGCATGGGTTATCTG-TGAGTTACAATA 1042
Query 923 GGTTTGGCGGTGAC-TTGCCTACCTCCATTGCCAATCTGTCCAC-AAACCTCATC-TATT 979
|| |||| |||| | |||||||| ||||||| |||| ||||||| || |||| | | ||
Sbjct 1043 GGCTTGGGGGTG-CTTTGCCTACATCCATTGTCAATATGTCCACGGAA-CTCACCGT-TT 1099
Query 980 T-AAGCTTTCaaa-aaaaTCGCATCTCTGGAAACATTCCCCATGACATTGGGAATCTCAT 1037
| || | || ||| ||| | ||| | ||||| |||||| ||||| ||||| ||||||||
Sbjct 1100 TGAA-CCTT-AAAGGAAACCTCATTTATGGAAGCATTCCTCATGATATTGGAAATCTCAT 1157
Query 1038 AAGCCTTCAATCACTTGGGTT-GAACGAGAATTTGTTGACAGGACCACTCCCAACCTCTC 1096
| |||| ||||||||| ||| | | || ||| | || ||||||||||||||||||||||
Sbjct 1158 AGGCCTACAATCACTTTTGTTGGCA-GATAATCTATTAACAGGACCACTCCCAACCTCTC 1216
Query 1097 TTGGTAAGCTTTTAGGATTGGGGGAACTAAGTGTT-CATTCAAATAGAATGTCGGGAGAG 1155
|||| || ||| |||| | |||||| ||| | || ||||||||| | || ||||||
Sbjct 1217 TTGGAAATCTTGTAGGGCTCGGGGAATTAA-TTTTGTTTTCAAATAGGTTTTCTGGAGAG 1275
Query 1156 ATACCATCTTCTATAGGCAACATCACT-ATGTTA-CAAAGACTTTATTTGA-ACAACAAT 1212
||||| |||| |||||||||| | ||| | |||| ||| ||| ||||| | |||||||
Sbjct 1276 ATACCCTCTTTTATAGGCAACCTTACTCA-GTTAGTAAA-ACTATATTT-ATCCAACAAT 1332
Query 1213 AGTTTTGAAGGAACT-GTTCCTCCGAGTCTCGGTAATTCTAGGCAGC-TGCTAGATTTAC 1270
||||||||||||| | |||||||||||||| ||| ||| ||| || | |||| || ||||
Sbjct 1333 AGTTTTGAAGGAA-TCGTTCCTCCGAGTCTTGGTGATTGTAGTCA-CATGCTCGACTTAC 1390
Query 1271 GGA-TGGGATATAATAAGTTGAATGGGACTATACCTAAAGAAATCATGCAAATCTCAACC 1329
|| |||| ||||||||||| ||||||||||||||||| || |||||||||||| |||||
Sbjct 1391 AGATTGGG-TATAATAAGTTAAATGGGACTATACCTAAGGAGATCATGCAAATCCCAACC 1449
Query 1330 CTTGTTAACCT-AGGATTGTCAGCTAATTCATTGACCGGCTCTCTGCCAAATAATGTTGA 1388
|||||| |||| | | || | ||||||| |||| |||||||| ||||| || |||
Sbjct 1450 CTTGTTCACCTCAACA-TGGAATCTAATTCTTTGAGTGGCTCTCTACCAAACGATATTGG 1508
Query 1389 AAGATTACAAAATCTTGTTGTGTTATCACTTGGTAATAACAAATTGTTC-GGACGA-CTC 1446
|||||||||||||||||||| | ||| |||||| ||||| || || || |||| | |||
Sbjct 1509 AAGATTACAAAATCTTGTTGAGCTATTACTTGGGAATAATAACTT-ATCAGGAC-ATCTC 1566
Query 1447 CCAAAAACCTTGGGAAAATGTATCTCGTTGGAA-CAACTTTATCTGCAAGGAAATTC-TT 1504
||| |||| |||||||||||| | ||| ||||| | ||||||| ||| |||| | ||
Sbjct 1567 CCACAAACTTTGGGAAAATGTCTTTCGATGGAAGTTA-TTTATCTACAA-GAAAACCATT 1624
Query 1505 TTGACGGAGA-TATTCCAGATATAAGAGGGTTAATGGGTGTTAAAAGA-GTTGATTTGTC 1562
|||| ||| | ||||||||||||| |||||| ||||||||||||| | |||||||||||
Sbjct 1625 TTGATGGA-ACCATTCCAGATATAAAAGGGTTGATGGGTGTTAAAA-ACGTTGATTTGTC 1682
Query 1563 AAAAAATAATCTCTCTGGAAGTATACCTGGATATCTTGCAAACTTTTCCAAGCTGCAGTA 1622
||| ||||||||||||||||||||| ||| |||| ||| ||||||||||||| || | ||
Sbjct 1683 AAACAATAATCTCTCTGGAAGTATATCTGAATATTTTGAAAACTTTTCCAAGTTGGAATA 1742
Query 1623 TCTCAATCTATCTTTTAACAATTTTGAGGGGAA-AATGCCAACAGAAGGAATATAT-AAG 1680
|||||||||||| ||||||||| || ||||| | | |||||||||||||||| | ||
Sbjct 1743 TCTCAATCTATCCGATAACAATTTCGA-GGGAAGAGTCCCAACAGAAGGAATATTTCAA- 1800
Query 1681 AAT-ATGACTATT-GTCTCAGTATTTGGAAACAAAGATCTATGTGGAGGCATCAGGGAGT 1738
||| | ||| || || |||||||| ||||||||| |||| |||||| |||||| |||
Sbjct 1801 AATGCT-ACT-TTAGTTTCAGTATTCGGAAACAAAAATCTTTGTGGAAGCATCAAGGAAC 1858
Query 1739 TGCAACTAAAGCCATGCCTCGTGGAAGCACCACCGA-TGGAGAGAAAACATTCC-TCTCA 1796
|| |||||||||||||| | | |||||||||| | |||||| || || ||| ||||
Sbjct 1859 TGAAACTAAAGCCATGCATTGCCCAAGCACCACC-AGTGGAGACAAGGCA-TCCATCTCT 1916
Query 1797 TTTGAAGAGAGTTGTGATCGGTGTCACCGTAGGCATAGCTTTGCTTTTGATATTGCTCAT 1856
|||||||| ||||| ||| || |||| |||||||||||||||||||||| ||||| ||||
Sbjct 1917 TTTGAAGAAAGTTGCGATTGGGGTCAGCGTAGGCATAGCTTTGCTTTTGCTATTGTTCAT 1976
Query 1857 AGCTTCATTTGCT-ATATGGTTCAGAAAAAGAAAGAATAATCAGCAGACT-AATAA-TCA 1913
|| || | | || | ||||||| |||||||||||| || ||| ||| | ||||| ||
Sbjct 1977 AG-TT--TCT-CTAAGCTGGTTCAAAAAAAGAAAGAACAACCAGAAGA-TCAATAATTC- 2030
Query 1914 AACTCCTTCCACTTTGGGTG-CCTTCCATGAAAAGATAAGCTATGGACATCTCCGAAACG 1972
| |||||| || || || | |||||||||||| |||| |||||| |||| ||||| |
Sbjct 2031 AGCTCCTTTTACATT-GGAGATTTTCCATGAAAAGCTAAGTTATGGAGATCTACGAAATG 2089
Query 1973 CGACAGATGGCTTCTCTTCGAGCAATATGGTTGGGTTAGGAAGTTTTGGTACTGTGTTTA 2032
|||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||
Sbjct 2090 CGACAGATGGCTTCTCTTCGAGCAATATAGTTGGGTCAGGTAGTTTTGGTACTGTGTTTA 2149
Query 2033 AGGCATTACTTCCAG-CAGAGAAATATG-TTGTTGGGGTGAAAGTTCTAAACATGCAAAA 2090
||||||| | ||||| | ||| || | | |||||| |||||||||||||||||||| |
Sbjct 2150 AGGCATTGC-TCCAGACGGAG-AACAAGATTGTTGCAGTGAAAGTTCTAAACATGCAGAG 2207
Query 2091 ACATGGAGCGATGAAGAGCTTTATGGCAGAGTGTGAATCCCTCAAGGACGTAAGGCATCG 2150
|| |||||| |||||||||||||||||||| |||||||| | ||||| ||||||||||
Sbjct 2208 ACGTGGAGCTATGAAGAGCTTTATGGCAGAATGTGAATCTTTGAAGGATATAAGGCATCG 2267
Query 2151 TAATCTTGTGAAACTTTTGACGGCTTGTTCGAGTATTGATTTCCAAGGAAACGAATTCAG 2210
|||||| |||||||| ||||| ||||| | ||||||||||||||||| |||||||||||
Sbjct 2268 TAATCTCGTGAAACTATTGACAGCTTGCGCTAGTATTGATTTCCAAGGTAACGAATTCAG 2327
Query 2211 GGCTCTCATCTATGAGTTCATGCCGAATGGAAGCTTGGATATGTGGCTGCACCCAGAAGA 2270
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||
Sbjct 2328 AGCTCTCATCTATGAGTTCATGCCGAATGGAAGTTTGGATAAATGGCTGCACCCAGAGGA 2387
Query 2271 AGTGGAAGAGATTCGTAGACCCTCAAGAACCTTGACACTTCTTGAAAGGCTCAACATTGC 2330
||| |||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||
Sbjct 2388 AGTCGAAGAGATTCATAGGCCCTCAAGAACTTTGACACTTCTTGAAAGGCTTAACATTGC 2447
Query 2331 CATAGACGTGGCTTCAGTTTTAGACTATCTTCATGTTCATTGTCATGAGCCTATAGCTCA 2390
||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 2448 CATAGACGTGGCTTCTGTTTTGGACTATCTTCATGTTCACTGTCATGAGCCTATAGCTCA 2507
Query 2391 TTGCGATCTTAAGCCAAGCAACGTCCTCCTAGACGATGATTTGACTGCTCATGTTAGTGA 2450
|||||||||||||||||||||| | || || ||||||||| | ||||| |||||||| ||
Sbjct 2508 TTGCGATCTTAAGCCAAGCAACATACTTCTCGACGATGATCTAACTGCCCATGTTAGCGA 2567
Query 2451 TTTTGGTCTAGCTCGACTGCTCCTCAAATTCGACCAAGAGTCCTTCCTCAATCAACTCAG 2510
|| ||||| ||||| || ||||||||||||||||| ||||| ||| |||| ||||| ||
Sbjct 2568 CTTCGGTCTCGCTCGTCTTCTCCTCAAATTCGACCAGGAGTCTTTCTTCAACCAACTAAG 2627
Query 2511 CTCCGCTGGCGTGAGAGGAACCATCGGTTATTGC-GCACCAGAATATGGAATGGGAGGAC 2569
||| ||||| || ||||||||||| || ||| || |||||||||||||||||||||||||
Sbjct 2628 CTCAGCTGGTGTTAGAGGAACCATTGGGTAT-GCCGCACCAGAATATGGAATGGGAGGAC 2686
Query 2570 AGCCATCAATACAAGGTGATGTGTATAGCTTTGGGGTTCTCCTTTTGGAAATGTTCACTG 2629
| || |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 2687 AACCGTCAATACACGGTGATGTATATAGCTTTGGGGTTCTCGTTTTGGAAATGTTCACTG 2746
Query 2630 GAAAAAGACCAACTAATGAGCTATTTGGCGGAAACTTTACCCT-ACACAGCTACACCAAG 2688
||||||||||||| |||||| ||||||| |||||||||||||| | ||||||||||||||
Sbjct 2747 GAAAAAGACCAACCAATGAGTTATTTGGAGGAAACTTTACCCTGA-ACAGCTACACCAAG 2805
Query 2689 TCTGCGTTGCCGGAAAGAGTATTGGATGTTGCGGACGAATCCATTCTTCACA-TCGGTCT 2747
| || ||||| |||||||| ||||| |||| ||| |||| |||||||| | | |||||
Sbjct 2806 GCGGCCTTGCCAGAAAGAGTTTTGGACATTGCAGACAAATCGATTCTTCATAGT-GGTCT 2864
Query 2748 CCGAGTCGGTTTTCCAATTGTTGAGTGCTTGAAAttttttttCGAGGTGGGACTTATG-T 2806
| |||| ||||| || | |||||||||||||| |||| || |||||||||| | |
Sbjct 2865 CAGAGTTGGTTTCCCTGTACTTGAGTGCTTGAAAGGGATTTTGGATGTGGGACTTA-GAT 2923
Query 2807 GCTGTGAAGAAGT-TCCAA-GCAACCGGCTGGCAATGAGTGAAGTT-CTCAAGGAATTAA 2863
| ||||||||| | ||| | |||||| |||||| |||||||| | |||||| ||||
Sbjct 2924 GTTGTGAAGAA-TCTCCGCTG-AACCGGTTGGCAACGAGTGAAGCAGC-CAAGGAGTTAA 2980
Query 2864 TCTCAATCAGAGAGAGGTTCTTCAGAGCCAGAAGAAAAGCTGGACGTTGA 2913
|||||||||||||||| ||||| | | || | |||| ||| ||||||||
Sbjct 2981 TCTCAATCAGAGAGAGATTCTTTAAAACCCGGAGAACAGCCAGACGTTGA 3030
Score = 667 bits (361), Expect = 0.0
Identities = 689/843 (82%), Gaps = 40/843 (5%)
Strand=Plus/Plus
Query 11 AAGCATATGGTATTACTGATGAAACTGATAGGCAAGCTTTGTTGGAGATAAAGTCTCAAG 70
||||||||||| |||| ||||||| |||||||||||| ||||||||||| ||||||||||
Sbjct 47 AAGCATATGGTTTTACCGATGAAAGTGATAGGCAAGCGTTGTTGGAGATCAAGTCTCAAG 106
Query 71 TTTCTGAAGAG-AAAAGAGTTGTCTTGTCCTCATGGAATCACTCATTCCCGCTTTGCAAC 129
|||||||| || ||||| | || ||||||| | |||||| |||||||||| || |||| |
Sbjct 107 TTTCTGAA-AGCAAAAGGGATGCCTTGTCCGCGTGGAATAACTCATTCCCTCTCTGCAGC 165
Query 130 TGG-ATTGGGGTAACATGTGGCCTCAAACACAAGAGAGTTACTAGTTTGGACCTAC-GAG 187
||| | | |||| | |||||||| ||||||||||||||||||| |||||||||| | |||
Sbjct 166 TGGAAGT-GGGTTAGATGTGGCCGCAAACACAAGAGAGTTACTCGTTTGGACCT-CGGAG 223
Query 188 GATTGCAATTGGGCGGAGTAATATCACCATCTATTGGTAATCTTTCGTTTCTCATATCGC 247
||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 224 GATTGCAGTTGGGAGGAGTGATATCACCATCTATTGGTAATCTTTCGTTTCTCATATATC 283
Query 248 TTAATCTCTCTGGTAACTCTTTTGGTGGTACCATTCCTCAAGAGGTGGGAAATTTGTTTA 307
|| | |||||| ||||||||||||||| ||||| ||||||||| ||||||| |||||||
Sbjct 284 TTGACCTCTCTAATAACTCTTTTGGTGGAACCATCCCTCAAGAGATGGGAAACTTGTTTA 343
Query 308 GACTTGAATACTTGGATATGAGCTTAAATTTTCTGGGAGGAGGGATTCCAACGAGTTTGT 367
||||| |||| |||| | || |||| |||| ||||| ||||| ||||||| | |||||||
Sbjct 344 GACTTAAATATTTGGCTGTGGGCTTTAATTATCTGGAAGGAGAGATTCCAGCCAGTTTGT 403
Query 368 CTAACTGCTCTAGATTGTTGTACCTTTATTTATTTTCAAATCAC-CTTGGAGGAAG-TGT 425
| |||||||||||||||||||||||| ||||||||||||| || ||||||| | | |||
Sbjct 404 CCAACTGCTCTAGATTGTTGTACCTTGATTTATTTTCAAA-CAATCTTGGAG-ACGGTGT 461
Query 426 TCCTTCAGAATTAGGGTCATTGACGAA-GCTTGTT-AGCTTAAATTTTGGTCGAAACAAC 483
|||||||||| |||||||||||| ||| |||| || | || | || |||||| |||| ||
Sbjct 462 TCCTTCAGAACTAGGGTCATTGA-GAAAGCTTCTTTATCT-ATATCTTGGTCTAAACGAC 519
Query 484 CTACAA-GGAACACT-CCCCGCAACTCTAGGAAACATGACATCCCTTGTA-TATTTTAAC 540
|| ||| |||| | | ||||| | | || ||||| |||| || || || | | |||
Sbjct 520 CT-CAAAGGAA-AGTTCCCCGTATTTATACGAAACTTGACGTCTCTAATAGTGCTC-AAC 576
Query 541 TTGGGA-ATTAA-CAATATAGAAGGAGGAATTCCAGATGGTTTTGCTA-GAATGACTCAG 597
|||||| || || || | | ||||||| ||||||||||| | | |||| | ||| |||
Sbjct 577 TTGGGATAT-AATCA-TCTGGAAGGAGAAATTCCAGATGATATAGCTATGC-TGAGTCAA 633
Query 598 TTGGTGGGTATTGA-ATTATCAGGGAACAATTTCTCAGGTGTTTTTCCTCCTGCTATCTA 656
||||| | || | |||| || |||||| ||||| || ||||||||||||||| ||||
Sbjct 634 ATGGTGTCTCTT-ACATTAACAATGAACAACTTCTCTGGCGTTTTTCCTCCTGCTTTCTA 692
Query 657 CAACGTGTCCTCACTTGAGCTTTTATACATCTTTAGTAATGGTTTTTGGGGTAATTTGAG 716
|||| |||||||||||||| ||||||| || || |||||||||| | |||||| ||||
Sbjct 693 CAACTTGTCCTCACTTGAGAATTTATACCTCCTTGGTAATGGTTTCTCGGGTAACTTGAA 752
Query 717 GCCTGATTTTGGTAATTTGCTACCAAACCTTAAAGCACTAA-CTATAGGA-G-ATAATTA 773
|||||||||||||||| ||||||||||| || | | | | | || | | | | | ||||
Sbjct 753 GCCTGATTTTGGTAATCTGCTACCAAACATTCATG-AGTTATCTTT-GCATGGA-AATT- 808
Query 774 TT-TCACTGGAACCATTCCAACAACACTTCCCAATATCTCGAA-TCTTCAAGAT-TTTGG 830
|| | || ||| |||| |||||||||||| ||||||| || || ||| || || |||||
Sbjct 809 TTCTAACAGGAGCCATCCCAACAACACTTGCCAATATTTC-AACTCTGGAA-ATGTTTGG 866
Query 831 AAT 833
|||
Sbjct 867 AAT 869
> AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17527507-17530929 FORWARD LENGTH=3318
Length=3318
Score = 1650 bits (893), Expect = 0.0
Identities = 1660/2023 (82%), Gaps = 81/2023 (4%)
Strand=Plus/Plus
Query 919 AATAGGTTTGGCGGTGACTTGCCTACCTCCATTGCCAATCTGTCCACAAACCTCATCTA- 977
|||||| |||| ||||||||||||| || ||||| || || ||| |||| ||| | |
Sbjct 1140 AATAGGCTTGGGGGTGACTTGCCTATATCTATTGCGAACCTATCCGCAAAACTCGT-AAC 1198
Query 978 TTTAAG-CTTTCaaaaaaaTCGCATCTCTGGAAACATTCCCCATGACATTGGGAATCTCA 1036
| | || | || | || | ||| || |||| |||||| |||||||||| |||||||
Sbjct 1199 TCT-AGACCTTGGAGGAACCCTCATTTCCGGAAGCATTCCTTATGACATTGGAAATCTCA 1257
Query 1037 TAAGCCTTCAATCA-CTTGGGTT-GAACGAGAATTTGTTGACAGGACCACTCCCAACCTC 1094
||| ||| ||| | ||| || || | | ||| |||||| |||||||||||||||||
Sbjct 1258 TAAACCTACAA-AAGCTTATTTTAGATC-AAAATATGTTGAGTGGACCACTCCCAACCTC 1315
Query 1095 TCTTGGTAAGCTTTTAGGA-TTGGGGGAACTAAGTGT-TCATTCAAATAGAATGTCGGGA 1152
|||||| |||||||| | | ||| || | ||||| | | |||||||||| | || |||
Sbjct 1316 TCTTGGAAAGCTTTT-GAATTTGAGGTATTTAAGTCTAT-TTTCAAATAGATTATCAGGA 1373
Query 1153 GAG-ATACCATCTTCTATAGGCAACATCACTATGTTACAAAGACTTTATTTGAACAACAA 1211
| | |||||| ||| |||||||||||| ||||||||| ||| |||| ||||| ||||||
Sbjct 1374 G-GTATACCAGCTTTTATAGGCAACATGACTATGTTAGAAACACTTGATTTGTCCAACAA 1432
Query 1212 TAGTTTTGAAGGAACTGTTCCTCCGAGTCTCGGTAATTCTAGGCAGCTGCTAGATTTACG 1271
| |||||||||| | ||||||| | ||||| || || | ||| || || ||||| || |
Sbjct 1433 TGGTTTTGAAGGTATTGTTCCTACAAGTCTTGGCAACTGTAGTCACCTACTAGAATTGTG 1492
Query 1272 GA-TGGGATATAATAAGTTGAATGGGACTATACCTAAAGAAATCATGCAAATCTCAAC-C 1329
|| |||| |||||||||||||||||||||||||| ||||| ||| |||| ||| |
Sbjct 1493 GATTGGG-GATAATAAGTTGAATGGGACTATACCTCTGGAAATTATGAAAAT-TCAGCAG 1550
Query 1330 CTTGTTAACCTAGGA-TTGTCAGCTAATTCATTGACCGGCTCTCTGCCAAATAATGT-TG 1387
||| || |||| || |||||| ||||| |||| ||||||||| || | || | |
Sbjct 1551 CTTCTTCGCCTA-GACATGTCAGGAAATTCTTTGATCGGCTCTCTCCCGCAGGATATCGG 1609
Query 1388 AAAGATTACAAAATCTTGTTGTGTTATCACTTGGTAATAACAAATTGTTC--GGACGACT 1445
| | |||||||||||| | |||||||||| |||| ||||| || ||| |||
Sbjct 1610 AGCG-CTACAAAATCTTGGTACACTATCACTTGGGGATAATAAATT-ATCAGGGA-AACT 1666
Query 1446 CCCAAAAACCTTGGGAAAATGTATCT-CGTTGGAACA-ACTTTATCTGCAAGGAAA-TTC 1502
||| |||| |||||||| ||| | | | ||||| | |||| | || ||||||| ||
Sbjct 1667 TCCACAAACTTTGGGAAACTGTCT-TACAATGGAA-AGTCTTTTTTTGGAAGGAAATTTG 1724
Query 1503 TTTTGACGGAGATATTCCAGATATAAGAGGGTTAATGGGTGTTAAAAG-AGTTGATTTGT 1561
|||| | ||||||||||||||| ||| |||||| |||||||| |||| |||||||||||
Sbjct 1725 TTTT-ATGGAGATATTCCAGATTTAAAAGGGTTGGTGGGTGTT-AAAGAAGTTGATTTGT 1782
Query 1562 CAAAAAATAATCTCTCTGGAAGTATACCTGGATATC-TTGCAAACTTTTCCAAGCTGCAG 1620
| || ||| ||||||||||||||||||||| ||| | |||||| |||||||||| || ||
Sbjct 1783 CTAACAATGATCTCTCTGGAAGTATACCTGAATA-CTTTGCAAGCTTTTCCAAGTTGGAG 1841
Query 1621 TATCTCAATCTATCTTTTAACAATTTTGAGGGGAAA-ATGCCAACAG-AAGGAATATATA 1678
|||||||||||||||||||||||| |||| |||||| |||| | | ||||||||| |
Sbjct 1842 TATCTCAATCTATCTTTTAACAATCTTGA-GGGAAAGGTGCC-AGTGAAAGGAATATTTG 1899
Query 1679 AGAAT-ATGACTATTGTCT-CAGTATTTGGAAACAAAGATCTATGTGGAGGCATCA-GGG 1735
||||| | |||| || | || || |||| ||||| ||| |||||||||| || | |||
Sbjct 1900 AGAATGCT-ACTACAGTTTCCA-TAGTTGGGAACAATGATTTATGTGGAGGTATTATGGG 1957
Query 1736 AGTTGCAACTAAAGCCATGCCTCGT-GGAAGCACCA-CCGATGGAG-AGAAAACATTCCT 1792
||| ||||||||||||||||| | | |||||||| | | ||| | || || ||||| |
Sbjct 1958 -GTTTCAACTAAAGCCATGCCT-TTCGCAAGCACCATCTG-TGGTGAAG-AAGCATTCAT 2013
Query 1793 CTCATTTGAAGAGAGTTGTGATCGGTGTCACCGTAGGCATAGCTTTGCTTTTGATATTGC 1852
||| ||| |||| ||||||||| || || | |||||||||| ||||||||||| | |||
Sbjct 2014 CTCGTTTAAAGAAAGTTGTGATTGGAGTTAGCGTAGGCATAACTTTGCTTTTGTTGTTGT 2073
Query 1853 TCATAGCTTCATTTGC--T-ATATGGTTCAGAAAAAGAAAGAATAATC--AGCAGACTAA 1907
|||| |||||| || | | || ||||| ||||| |||||||| || | || | || ||
Sbjct 2074 TCATGGCTTCAGTTACTTTGATTTGGTTGAGAAAGAGAAAGAAGAA-CAAAG-AAACCAA 2131
Query 1908 TAATCAAACTCCTTCCACTTTGGGTGCCTTCCATGAAAAGATAAGCTATGGACATCTCCG 1967
||||| ||||||||| ||||||| | ||| ||||| |||||||| |||||| |||| ||
Sbjct 2132 TAATCCAACTCCTTCTACTTTGGAAGTCTTGCATGAGAAGATAAGTTATGGAGATCTTCG 2191
Query 1968 AAACGCGACAG-ATGGCTTCTCTTCGAGCAATATGGTTGGGT-TAGGAAGTTTTGGTACT 2025
|| ||||| | ||||||||||||||||||||||||| |||| | || |||||||||||
Sbjct 2192 TAATGCGAC-GAATGGCTTCTCTTCGAGCAATATGGTCGGGTCT-GGCAGTTTTGGTACC 2249
Query 2026 GTGTTTAAGGCATTACTTCCAG-CAGAGAAATATGTTGTTGGGGTGAAAGTTCTAAACAT 2084
|| | ||||||||| | ||| | | |||||| | ||||||| ||||||||| |||||||
Sbjct 2250 GTATATAAGGCATTGC-TCCTGACGGAGAAAAAGGTTGTTGCAGTGAAAGTTTTAAACAT 2308
Query 2085 GCAAAAACATGGAGCGATGAAGAGCTTTATGGCAGAGTGTGAATCCCTCAAGGACGTAAG 2144
||| | || ||||||||||||||||||||||||||| ||||||||| | |||||| ||||
Sbjct 2309 GCAGAGACGTGGAGCGATGAAGAGCTTTATGGCAGAATGTGAATCCTTGAAGGACATAAG 2368
Query 2145 GCATCGTAATCTTGTGAAACTTTTGACGGCTTGTTCGAGTATTGATTTCCAAGGAAACGA 2204
|||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||
Sbjct 2369 ACATCGTAATCTTGTGAAACTATTGACAGCTTGTTCGAGTATTGATTTTCAAGGAAATGA 2428
Query 2205 ATTCAGGGCTCTCATCTATGAGTTCATGCCGAATGGAAGCTTGGATATGTGGCTGCACCC 2264
||| || ||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct 2429 ATTTAGAGCTCTCATCTATGAGTTCATGCCTAATGGAAGTTTAGATATGTGGCTGCACCC 2488
Query 2265 AGAAGAAGTGGAAGAGATTCGTAGACCCTCAAGAACCTTGACACTTCTTGAAAGGCTCAA 2324
||| |||||||||||||||| ||| ||||||||||| ||||| |||||||||||||| ||
Sbjct 2489 AGAGGAAGTGGAAGAGATTCATAGGCCCTCAAGAACTTTGACCCTTCTTGAAAGGCTTAA 2548
Query 2325 CATTGCCATAGACGTGGCTTCAGTTTTAGACTATCTTCATGTTCATTGTCATGAGCCTAT 2384
||||||||||||||||||||| ||||| || ||||| ||||||||||||||||| |||||
Sbjct 2549 CATTGCCATAGACGTGGCTTCTGTTTTGGATTATCTCCATGTTCATTGTCATGAACCTAT 2608
Query 2385 AGCTCATTGCGATCTTAAGCCAAGCAACGTCCTCCTAGACGATGATTTGACTGCTCATGT 2444
||||||||||||||||||||||||||||||||| |||||||||||| | || || |||||
Sbjct 2609 AGCTCATTGCGATCTTAAGCCAAGCAACGTCCTTCTAGACGATGATCTAACCGCCCATGT 2668
Query 2445 TAGTGATTTTGGTCTAGCTCGACTGCTCCTCAAATTCGACCAAGAGTCCTTCCTCAATCA 2504
|||||| |||||||||||||| || ||||||||||||||| | ||||||||| |||| ||
Sbjct 2669 TAGTGACTTTGGTCTAGCTCGTCTTCTCCTCAAATTCGACGAGGAGTCCTTCTTCAACCA 2728
Query 2505 ACTCAGCTCCGCTGGCGTGAGAGGAACCATCGGTTATTGC-GCACCAGAATATGGAATGG 2563
||| ||||| || || || |||||||||||||| ||| || |||||||| |||||| |||
Sbjct 2729 ACTAAGCTCAGCCGGTGTTAGAGGAACCATCGGCTAT-GCCGCACCAGAGTATGGAGTGG 2787
Query 2564 GAGGACAGCCATCAATACAA-GGTGATGTGTATAGCTTTGGGGTTCTCCTTTTGGAAATG 2622
||||||||||||| ||| || |||||||| ||||| |||||| |||||||||| ||||||
Sbjct 2788 GAGGACAGCCATCTATA-AATGGTGATGTATATAGTTTTGGGATTCTCCTTTTAGAAATG 2846
Query 2623 TTCACTGGAAAAAGACCAACTAATGAGCTATTTGGCGGAAACTTTACCCT-ACACAGCTA 2681
|||||||||||||||||||| |||||||||||||| |||||||||||||| | |||||||
Sbjct 2847 TTCACTGGAAAAAGACCAACCAATGAGCTATTTGGAGGAAACTTTACCCTGA-ACAGCTA 2905
Query 2682 CACCAAGTCTGCGTTGCCGGAAAGAGTATTGGATGTTGCGGACGAATCCATTCTTCACAT 2741
||| ||||| || |||||||||||| ||||||| ||| |||||||| |||||||||||
Sbjct 2906 CACTAAGTCGGCATTGCCGGAAAGAATATTGGACATTGTAGACGAATCAATTCTTCACAT 2965
Query 2742 CGGTCTCCGAGTCGGTTTTCCAATTGTTGAGTGCTTGA-AAttttttttCGAGGTGGGAC 2800
|||||| |||||||||| || ||||||||||||||| ||| ||||| |||||||| |
Sbjct 2966 TGGTCTCAGAGTCGGTTTCCCTGTTGTTGAGTGCTTGACAATGGTTTTT-GAGGTGGGCC 3024
Query 2801 TTATGTGCTGTGAAGAAGT-TCCAA-GCAACCGGCTGGCAATGAGTGA-AGTTC-TCAAG 2856
||| ||| ||||||||| | ||| | | |||||| |||||| |||| | ||| | |||||
Sbjct 3025 TTAGGTGTTGTGAAGAA-TCTCCGATG-AACCGGTTGGCAACGAGT-ATAGT-CGTCAAG 3080
Query 2857 GAATTAATCTCAATCAGAGAGAGGTTCTTCAGAGCCAGAAGAA 2899
|| || ||||||||||||||||||||||| | |||||| ||||
Sbjct 3081 GAGTTGATCTCAATCAGAGAGAGGTTCTTTAAAGCCAGTAGAA 3123
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144781797498
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5