BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323421
Length=5907
Score E
Sequences producing significant alignments: (Bits) Value
AT3G48195.1 | Symbols: | Phox (PX) domain-containing protein |... 3145 0.0
AT3G48200.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 2300 0.0
> AT3G48195.1 | Symbols: | Phox (PX) domain-containing protein
| chr3:17828572-17832731 REVERSE LENGTH=3294
Length=3294
Score = 3145 bits (1703), Expect = 0.0
Identities = 1909/2010 (95%), Gaps = 7/2010 (0%)
Strand=Plus/Plus
Query 3903 AGATTTTGGAGACCTGAGCGCTGGAGTTAAAACCTTGGTGGTTCGCCAATCACTGGTAAC 3962
||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1153 AGATTTTGGTGACCTGAGCGCTGAAGTTAAAACCTTGGTGGTTCGTCAATCACTGGTAAC 1212
Query 3963 AGATGAGTCTCTCCGTGACAGTTGTCTTAGCAACAGTCAAAATGAAGATAGACCTGTAGT 4022
||||||| |||| || | |||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1213 AGATGAGCCTCTTCGGGGCAGTTGTCTTGGCAACAGTCAAACTGAAGATAGACCTGTAGT 1272
Query 4023 CATGAATTACCTTCAATCTTGTAGCACTGACGACGTCCTAGATATTACACCAACTGAGTT 4082
||||||| ||||||||||||||||| |||| || ||||||||||||||||||||||||||
Sbjct 1273 CATGAATAACCTTCAATCTTGTAGCGCTGATGATGTCCTAGATATTACACCAACTGAGTT 1332
Query 4083 AGGTATTGAAGATCCTTCAGGTGGGGTTTGCAACCTAGATGGCGATGTTTCTTCTGGTCT 4142
||||||||||||| ||||||||||||||||| |||| |||| ||||||||||||||| ||
Sbjct 1333 AGGTATTGAAGATTCTTCAGGTGGGGTTTGCGACCTTGATGACGATGTTTCTTCTGGACT 1392
Query 4143 ACTTCATGAATCATCTGAGAATGGAAAACAGTCAGAA-CCATTTGGAGAGTGCACCTCAG 4201
||||||||||||||||||| |||||||||||||| || |||||||| || ||||||||||
Sbjct 1393 ACTTCATGAATCATCTGAGGATGGAAAACAGTCA-AATCCATTTGGGGAATGCACCTCAG 1451
Query 4202 AACCGTTGTTGGCATCTCAGAAGTCTGATATGCCATCATCTAGAGATTCTCATCCTGTAA 4261
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1452 AACCGTTGTTGGCATCTCAGAACTCTGATATGCCATCATCTAGAGATTCTCATCCTGTAA 1511
Query 4262 CAAATGCCTTACAAGTCACTTACACACAACCTAAGAAGGAGAACACAGAGCTAAACGACT 4321
||||||||| | |||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1512 CAAATGCCTCAAAAGTCACTTACACACAACCTAAGAAGGAGAACACTGAGCTAAATGACT 1571
Query 4322 TCTATGATGATTTTGTTCATGATATGGAAGAAATACTGCTCGACTCTGGTGAATCATCTG 4381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1572 TCTATGATGATTTTGTTCATGATATGGAAGAAATACTGCTCGACTCTGGTGAATCATCTG 1631
Query 4382 GGGTAAGATTTTCTAAGAATGACAAGATGTTCCAACTACAGCTCTCTCTGCCTAACAGGG 4441
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1632 GGGTAAGGTTTTCTAAGAATGACAAGATGTTCCAACTACAGCTCTCTCTGCCTAACAGGG 1691
Query 4442 ATGGGGGGCAAACTGCTACAACGTCTGGTCTAGATGATTCATCTCCAACAGTTTCCCAGC 4501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692 ATGGGGGGCAAACTGCTACAACGTCTGGTCTAGATGATTCATCTCCAACAGTTTCCCAGC 1751
Query 4502 GATTTAGGATTGATAGGGTTGAAGTTGTCGGGGTAAAGCAAAAGAAAGGTGATGTCTCGC 4561
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct 1752 GATTTAGGATTGATAGGGTTGAAGTTGTCGGTGTAAAGCAAAAAAAAGGTGATGTTTCGC 1811
Query 4562 TGAGTGAAAGATTGGTTGGGGTGAAGGAATACACAGTGTATGTCATAAGGGTTTGGAGTG 4621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1812 TGAGTGAAAGATTGGTTGGGGTGAAGGAATACACAGTGTATGTCATAAGGGTTTGGAGTG 1871
Query 4622 GGAAAGACAAGTGGGAAATTGAAAGAAGATATCGTGATTTTTATAGTCTCTACCGTCGTT 4681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1872 GGAAAGACAAGTGGGAAATTGAAAGAAGATATCGTGATTTTTATAGTCTCTACCGTCGTT 1931
Query 4682 TGACATCTTTATTTGCTGATCAAGGCTGGACGCTTCCTACACCTTGGGCCTCTGCAGAGA 4741
||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |
Sbjct 1932 TGACATCTTTATTTGCTGATCAAGGCTGGACGCTTCCTACACCTTGGACCTCTGTAGAAA 1991
Query 4742 GAGAATCCAGGAAAATATTTGGAACATCGCCCAATGCCGTTGCTGACAGGACTGTCCTTA 4801
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
Sbjct 1992 GAGAATCCAGGAAAATATTTGGAACATCGCCCAATGCTGTTGCTGAAAGGACTGTCCTGA 2051
Query 4802 TTCAAGATTGTTTAAATTCAGTTCTCCAGTCGCGGTTTTTTCCGACACTTCCAAATGCGT 4861
||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 2052 TTCAAGATTGTTTAAATTCAGTTCTCCAGTCCCGTTTTTTTCCCACACTTCCAAATGCGT 2111
Query 4862 TACTTCGGTTTTTATCCCCTCAAGATGCATATGCTAATTCTTCTGGGTT---TTCTATAG 4918
||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2112 TACTTAGGTTTTTATCCCCTCAAGATGCATATGCTAATTCTTCGGGGTTGGATTCTATAG 2171
Query 4919 CATCTCCAACAGACTCTGCTGGCATC-ACTGCTGCTGCAAGCAGTTCTTCGTATGGAAAT 4977
||||||||||| |||||||| |||| | ||||||| ||| |||||||||||||||||||
Sbjct 2172 TATCTCCAACAGGCTCTGCTGCCATCGA-TGCTGCTACAACCAGTTCTTCGTATGGAAAT 2230
Query 4978 ACCATCTCGTTCATTGTTGATATTCGACCTCAAAAATCAGTAAAGCAGTTGCTAGAAGCT 5037
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 2231 ACCATCTCGTTCATTGTTGATATTCGACCTCACAAATCAGTAAAGCAGTTGCTAGAGGCT 2290
Query 5038 CAGCATTACATTTGCGCTGGATGTCATAGATACTTTGATGATGGAGCCACTCTTGTGCGG 5097
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2291 CAGCATTACATTTGCGCTGGATGCCACAGATACTTTGATGATGGAGCCACTCTTGTGCGA 2350
Query 5098 GACTTTGTGAAAGCTCTGGGATGGGGTAAGCCTCGGCTTTGCGAATATACTGGTCAATTG 5157
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 2351 GACTTTGTGAAAGCTCTTGGATGGGGTAAGCCTCGGCTTTGCGAATATACTGGTCATTTG 2410
Query 5158 TTTTGTTCTTCCTGCCATGCAAATGACATGGCAGTTCTGCCAGCGAGAGTGTTACATCAT 5217
|||||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||
Sbjct 2411 TTTTGTTCTTCCTGCCATACAAATGACATGGCAGTACTGCCAGCAACAGTGTTACATCAT 2470
Query 5218 TGGGATTTTAATCGTTATCCAGTTTCTCAATTGGCAAAATCATATCTGGACTCCATACAC 5277
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2471 TGGGATTTTAATCGTTATCCAGTTTCTCAATTGGCAAAATCATATCTAGACTCCATACAC 2530
Query 5278 GAGCAGCCTATGCTTTGTGTCAGTGCGGTCAACCCTTTTCTGTCCTCGAAAGTCCCTGCA 5337
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 2531 GAGCAGCCTATGCTTTGTGTCAGTGCGGTCAACCCTTTTTTGTCCTCAAAAGTCCCTGCA 2590
Query 5338 CTCAACCGTATTATGAGCATCCGGAAAAGAATAACCATTATGCTTCCATATGTACGCTGC 5397
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CTCAACCATATTATGAGCATCCGGAAAAGAATAACCATTATGCTTCCATATGTACGCTGC 2650
Query 5398 CCATTCCGCAAGACACTCAACAAAGGACTCAGTTCTCGGAGATACCTTCTTGAGAGCACT 5457
||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct 2651 CCATTCCAAAAGACACTCTACAAAGGACTCAGTTCTCGCAGATACCTTCTTGAGAGCTCT 2710
Query 5458 GAtttttttGCTTTGAGAGATCTAATTGATCTTTCTAAAGGGCCATTTGCAGCACTTCCT 5517
|| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2711 GAATTTTTTGCTTTGAGAGATCTAATTGATCTCTCCAAAGGGCCATTTGCAGCACTTCCT 2770
Query 5518 GCTATCGTGGAGACCGTTAGGAGGAAAATCCTGGAGCATATTACGGAACAGTGCCTTGTT 5577
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2771 GCAATCGTGGAGACCGTTAGGAGGAAAATCCTGGAGCATATTACAGAACAGTGCCTTGTT 2830
Query 5578 TGTTGTGATGTGGGGATTCCCTGTAATGCTCGACAAGCTTGTGACGACACATCCTCTTTA 5637
||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2831 TGTTGCGATGTGGGGGTTCCCTGTAATGCCCGACAAGCTTGTGACGACACATCCTCTTTA 2890
Query 5638 ATATTTCCATTCCAGGAGAAAGATGAGGTTAACAAATGCCGGTCGTGCGGTTCGGTTTTC 5697
||||||||||| ||||||||||| ||||||| ||||||||||| |||||||| ||||||
Sbjct 2891 ATATTTCCATTTCAGGAGAAAGACGAGGTTAGCAAATGCCGGTTATGCGGTTCAGTTTTC 2950
Query 5698 CACAAGAGATGCTTAGCAAGACTCTCAAGCTGCCATTGCGGAGCACAACTAAAGCCGAAA 5757
||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2951 CACAAGAAATGCTTATCAAGACTCTCAAACTGCCATTGCGGAGCACAACTAAAGCCGAAC 3010
Query 5758 AAGAGCCCTGGAGAGCTGCAAGCATCGGAGAAGAAATCAGATTCTACGTCTGTATTGCCT 5817
|||| ||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||||
Sbjct 3011 AAGAACCCTGGAGAGCTGCAAGTATCGGAAAAGAAATCAGATTCTACATCTGTCTTGCCT 3070
Query 5818 CTACGATTCCTCTCAAGTTTATTTGGTAAGACAAAACAAGACAAAGAGACCACTATTCTA 5877
||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 3071 CTAAGATTCCTCTCAAGTTTATTTGGAAAGACAAAACAAGACAAAGAAACCACTATTCTT 3130
Query 5878 ATGGGTTCACTTCCAACCAACGATCTATAA 5907
||||||||||||||||| ||||||||||||
Sbjct 3131 ATGGGTTCACTTCCAACAAACGATCTATAA 3160
Score = 625 bits (338), Expect = 2e-177
Identities = 417/454 (92%), Gaps = 10/454 (2%)
Strand=Plus/Plus
Query 3430 AGTGGTATAGATAGAGAAGGTGGAAGTTCGAT--A-GATGATGAACATTCTGATGGTGAT 3486
||||||||||||||||||| ||||||||| || | |||||||||||||||||| | | |
Sbjct 710 AGTGGTATAGATAGAGAAGATGGAAGTTCCATAGATGATGATGAACATTCTGAT-G-G-T 766
Query 3487 GATGACTCACTTAGTGATTCAGGTGATCATTCTCGTAAATATGTTCCACGGAATTTTCAG 3546
|||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||
Sbjct 767 GATGACTCGCTTAGTGATTCAGGTGATCATTCTCGTAATTATGTTTCACGGAATTTACAG 826
Query 3547 TTTCAAAAGGAGCCTAAAGATGAGAATGATAATCCATTTCTCATCAATTCTTCCACTGCC 3606
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 827 TTTCAAAAGGAGGCTAAAGATGAGAACGATAATCCATTTCTCATCAATTCTTCCACTGCC 886
Query 3607 TTTGGTACAAATGATTGGGATGAGTTTGAGCTTGAAGCCACAGAACTTGTTGACACTCAA 3666
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 887 TTTGGTACAAATGATTGGGATGAGTTTGAGCTTGAAGCCACTGAACTTGTTGACACTCAA 946
Query 3667 TTTGAATTCAGTGGGTTTGAGAAGCGTGATAAAGGGTGTACTGAAAGTGAAGGGACATCC 3726
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 TTTGACTTCAGCGGGTTTGAGAAGCGTGATAAAGGGTGTACTGAAAGTGAAGGGACATCC 1006
Query 3727 ACAAAAGCATTTTCTGTATCGTTACAAAAGCTTCCAGATATAGCTCAAGCAGGAAATCGG 3786
||| | ||| |||||| | |||||||||||||||||| ||| |||||||| ||| ||
Sbjct 1007 ACAGATTTATTCTCTGTAGCTTTACAAAAGCTTCCAGATGTAGTTCAAGCAGAAAAA-GG 1065
Query 3787 GGA-GAGCAT-ACAAACGTAACTATGAGCACTAGACTTGCTCCAGATGTAGGTGACTTCC 3844
||| || ||| | ||| |||||| |||||||||||| ||||||||||||||||||||||
Sbjct 1066 GGAAGAACATGA-AAATGTAACTGTGAGCACTAGACATGCTCCAGATGTAGGTGACTTCA 1124
Query 3845 GTGCAAATATTGAAGATATTAGATCTAGAGATTT 3878
||||||||||||||||||||||||||||||||||
Sbjct 1125 GTGCAAATATTGAAGATATTAGATCTAGAGATTT 1158
Score = 381 bits (206), Expect = 4e-104
Identities = 291/328 (89%), Gaps = 22/328 (7%)
Strand=Plus/Plus
Query 3023 AGGAGGAATCATCGAGAGTTGATTCTCTAGATTGTTCATCGTTACATTACTCGTCATGTG 3082
||||||||||||||||||||||||| | || |||| ||||||||||||||||| ||||
Sbjct 357 AGGAGGAATCATCGAGAGTTGATTCGCCAG---GTTCGTCGTTACATTACTCGTCTTGTG 413
Query 3083 GTGAATCAGAGTTTGAGCGGTATTGTAGTGCGAATTCAGCTTTGGGAACGCCGAGTATGT 3142
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 414 GTGAATCAGAGTTTGAGCGGTATTGTAGTGCGAATTCGGCTTTGGGAACGCCGAGTATGT 473
Query 3143 GTAGCTCTACTGGACCGTTTCAGGATTCGTTGGAATCTGAATTTGAGAATTTTAGCTTGG 3202
|||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 474 GTAGCTCTACTGGACCGTTTCAGGATTC--------C-GAATTTGAGAATTTTAGCTTGG 524
Query 3203 GACCAAGTCCTA-TAAAGCTCTCTTCTTTGGATAA-TACACGATTAGGTAATCGAGGAAT 3260
||||||||| || | ||||||||||||||||||| | ||||||||||| ||||||| ||
Sbjct 525 GACCAAGTC-TAGTTAAGCTCTCTTCTTTGGATATGT-CACGATTAGGTGATCGAGGTAT 582
Query 3261 CCGATTT-T-CTGATGGGGGTGGGTCTTGTAATGGTAGAAGTAGAAGTGCACCCGGGTTA 3318
|| |||| | | |||| ||| || |||||||||||||||||||| ||||| |||||||||
Sbjct 583 CC-ATTTCTTC-GATGAGGGCGGCTCTTGTAATGGTAGAAGTAGTAGTGCGCCCGGGTTA 640
Query 3319 AACACCGGGAATGGGAACA-CTGATATG 3345
||||||||||||| ||||| | ||||||
Sbjct 641 AACACCGGGAATGTGAACATC-GATATG 667
> AT3G48200.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; Has 210 Blast
hits to 148 proteins in 42 species: Archae - 0; Bacteria
- 118; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 44 (source: NCBI BLink). | chr3:17832773-17837514
REVERSE LENGTH=3586
Length=3586
Score = 2300 bits (1245), Expect = 0.0
Identities = 1363/1421 (96%), Gaps = 4/1421 (0%)
Strand=Plus/Plus
Query 1530 GTGGAGAGATTTCAATAGGATAATGTTTTGGATAGCTATAATTGGAGGAAGTTTGGTACT 1589
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1988 GTGGAGAGATTTCAATAGGATCATGTTTTGGATAGCTATAATTGGAGGAAGTTTGGTACT 2047
Query 1590 ACTACATATAGTCCTCTCTCTGATACTGAAGTTCAAGAAATCACACACTGAAAAGAAGAG 1649
||| |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||
Sbjct 2048 ACTGCATATAGTCCTCTCTCTGATACTGAAGTTCAAGAAAGCACACAGTGAGAAGAAGAG 2107
Query 1650 GAGTTTTGGTGCTTTTGTCTTCCCAAGATTCGAGCTGTTTCTTCTCATTCTCGCCTTACC 1709
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2108 GAGTTTTGGTGCGTTTGTCTTCCCAAGATTCGAGCTGTTTCTTCTCATTCTCGCCTTACC 2167
Query 1710 CTCAATCTGCAAAGCTGCAAGGAGCCTTATACAAGGCTATTTTAAACATCAAGGAGCTGC 1769
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2168 TTCAATCTGCAAAGCTGCAAGGAGCCTTATACAAGGCTATTTTAAACACCAAGGAGCTGC 2227
Query 1770 AGAAGCCAGTGTCATTGTTGGCATCCTTGTGCTTTGCATGGTAGCTATTCTTCTTCTGGC 1829
||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||
Sbjct 2228 AGAAGCCAGTGTCATTGTTGGTATCCTTGTGCTTTGCGTGGTAGCTATTCTGCTTCTGGC 2287
Query 1830 ATTGTTTCTCTTCCTCTCGGTTGGGATAACGTTTGGGAAGTTATTACAGTATAAAGAGAT 1889
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 2288 ATTGTTTCTCTTCCTCTCGGTCGGGATAACGTTTGGGAAGTTGTTACAGTATAAAGAGAT 2347
Query 1890 TCATCAAGAAGGCCAAACTTTCCACTGGTACCAAGAACTCATACGAGTGACCCTTGGTCC 1949
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2348 TCATCAAGAAGGCCAAACTTTCCACTGGTACCAAGAACTCATCCGAGTGACCCTTGGTCC 2407
Query 1950 TGGTAAAAGAGGCCAATGGACATGGAAAACAGAGAACTCTGTTTATCTAACTAGGTTAGG 2009
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2408 TGGTAAAAGAGGCCAATGGACATGGAAAACAGAGAACTCTGTCTATCTAACTAGGTTAGG 2467
Query 2010 TCCAGTTTTCGAAGATTTAAGGGGTCCACCAAAGTACATGCTCACACAGATTTCAGGAAG 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2468 TCCAGTTTTCGAAGATTTAAGGGGTCCACCAAAGTACATGCTCACACAGATTTCAGGAAG 2527
Query 2070 CAATCCACTCAAGCAACGAGATGATCGAATCATTGCATCAGATGATGAAAACGAAGACGC 2129
||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||
Sbjct 2528 CAATCCACTCAAGCAACAAGATGATCGGATCATCGCATCAGATGATGAAAACGAAGATGC 2587
Query 2130 TGAAGCTCCTTGCATTCAGAAACTGTTTGGAATCCTTAGAATTTACTACACATTTCTCGA 2189
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2588 TGAAGCTCCTTGCATACAGAAACTCTTTGGAATCCTTAGAATTTACTACACATTTCTCGA 2647
Query 2190 AACTGTGAAGAGGGTGTGTTTGGGGATTATTGCTGGTGC-TTACTTAGACAATCAGACTG 2248
||||||||||||||||||||||||||||||||||||||| || ||| |||||| | ||||
Sbjct 2648 AACTGTGAAGAGGGTGTGTTTGGGGATTATTGCTGGTGCTTTCCTT-GACAATGAAACTG 2706
Query 2249 CGAAAACACCGATAGTGGTCTTGTTGAGCATCACTTCCTTTCAGCTGTTTTTCCTTCTTC 2308
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2707 CGAAAACTCCGATAGTGGTCTTGTTGAGCATCACTTCCTTTCAGCTGTTTTTCCTTCTTC 2766
Query 2309 TGAAGAAGCCATTCATCAAGAAAAAGGTACAGCTTGTAGAGATCATCTCTATAGCATGTC 2368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2767 TGAAGAAGCCATTCATCAAGAAAAAGGTACAGCTTGTAGAGATCATCTCTATAGCATGTC 2826
Query 2369 AAGTCGGTGTATTCGCCTCATGTCTAATGCTCTTGGCGAAAGACTTTCCCGATGCGAGCG 2428
||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 2827 AAGTCGGCGTATTCGCCTCATGTCTAATGCTCTTGGCGAAAGACTTTCCCGAGGCAAGCG 2886
Query 2429 GAAAGAAACTGGGGATATTCATGGT-GACATTGTTCTTGATTGGGTTCATTACACAAATG 2487
|||||||||| |||||||||||||| | ||||||||||||||| ||||||| | |||
Sbjct 2887 GAAAGAAACTCGGGATATTCATGGTCGT-ATTGTTCTTGATTGGATTCATTATGCTGATG 2945
Query 2488 TGCAACGAATGGTACTCCTTGTACAAACAGACAAAGCGGTTAGACCAAATCAACAGATCA 2547
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 2946 TGCAACGAATGGTACTCATTGTACAAACAAACAAAGCGGTTAGACCAAATCAACAGATCT 3005
Query 2548 TTCTTGAGTGGTCTCAAGATGTTTATCATTGGACTTGCCGCGTTAATACTTCCTCAGAAA 2607
|||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||
Sbjct 3006 TTCTTGAGTGGTCTTAAGATGTTTATCATTGGACTTGCCGCGTTAATCCTACCTCAGAAA 3065
Query 2608 ATGATCAAGAACAAGATCCCCGCGGCTCAACTAGAAGGAAGAAGCAGCAGCAATGGAGGC 2667
|||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||
Sbjct 3066 ATGATCAAGAACAAGATCCCCGTGGCTCAACTAGAAGCACGAAGCAGCAGCAATGGAGGC 3125
Query 2668 ACAACTCCAGAATTCAGGTATAGAAATTCATCCGGAAGCCGAAGCTCGGGTAGCTTGGAC 2727
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3126 ACAACCCCAGAATTCAGGTATAGAAATTCTTCCGGAAGCCGAAGCTCGGGTAGCTTGGAC 3185
Query 2728 AAGCCATGGTTGAAACAGATTAGGGAAATGGCAAAGTCTAGCTTCACTAGAGACAGGAGC 2787
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct 3186 AAGCCATGGTTGAAACAGATTAGAGAAATGGCAAAGTCTAGCTTCACAAGAGATAGGAGC 3245
Query 2788 AATAGTAAGGTTCCTAGTGATCCTTCGTGTAGCAAAAGCGGTTGGAGCAGTAGTATTTGG 2847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3246 AATAGTAAGGTTCCTAGTGATCCTTCGTGTAGCAAAAGCGGTTGGAGCAGTAGTATTTGG 3305
Query 2848 GGAACAAAGACAAGTGGAAGCTCTTCTAAGGAATCCTCTTCGGATTACAAATCAAGACCT 2907
||||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||||||
Sbjct 3306 GGAACAAAGACAAGTGGAAGCTCTTCTAAGGAATCATCTGCAGATTACAAATCCAGACCT 3365
Query 2908 AAAGGACTTTACAAAGATTTAGAGGCCATTTTTGCTTCaaa 2948
|| ||||||||||||||||||||||||||||||||||||||
Sbjct 3366 AAGGGACTTTACAAAGATTTAGAGGCCATTTTTGCTTCAAA 3406
Score = 1624 bits (879), Expect = 0.0
Identities = 971/1016 (96%), Gaps = 3/1016 (0%)
Strand=Plus/Plus
Query 9 GCTTCTTTTGCTTTTCTGGGTAGTCTCTTCCTCTTTGTGTTTCAGGTTTCATCACTGTTA 68
||||||| ||||||||||||| ||||||||| |||||||||||||||||||| |||||||
Sbjct 167 GCTTCTTCTGCTTTTCTGGGTTGTCTCTTCCCCTTTGTGTTTCAGGTTTCATTACTGTTA 226
Query 69 TGGTTCAGAGCTCTCTGTGAAGTTCGTGAAAGCACCTCCTGCTACTTCTAGATTTACCTC 128
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||
Sbjct 227 TGGTTCAGAGCTCTCTGTGAAGTTCTTGAAAGCACCTCCTACTACTTCTAGATTTACTTC 286
Query 129 TGCCAAATTTTCCTTTCAAGCTTTTGAGGATGGAAACAGAACTTGTTCAAGCTGCAAATT 188
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 287 AGCCAAATTTTCCTTTCTTGCTTTTGAGGATGGAAACAGAACTTGTTCAAGCTGCAAATT 346
Query 189 CCGTTGCAAGCTAGATGACCGTATTAGTTTGGATTGCCATCAAAGAAAAGTTTCCTACTC 248
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 347 CCGTTGCAAGCTAGATGACCGTATTAGTTTGGACTGCCATCAAAGAAAAGTTTCTTACTC 406
Query 249 GAAGTTGCTAGATGGAGATCATACACTTGAGGTCTGCGCAAATAGGATGCATGGATTTGG 308
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 407 GAAGTTGCTAGATGGAGATCATACACTTGAGGTTTGCGCAAATAGGATGCATGGATTTGG 466
Query 309 CTGCAATCACTATAATTGGACTGTTGATACAGTTTCTCCTACAGCCTTTGTGACTGCATC 368
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 467 CTGCAATCACTATAATTGGACTGTTGATACGGTTTCTCCTACAGCCTTTGTGACTGCATC 526
Query 369 AATGCCATTTACAAGTGCACAAAATGTGTCTGTTAATATTACTTTTACTGAGGCATGTGT 428
|||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 527 AATGCCATTTACAAGTGCACAAAACGTGTCTGTTAATATTACTTTTACTGAGCCATGTGT 586
Query 429 T-G--GAGGAGGATTCAGCTGTTCATCTGTGAATTCCTGCGACCTTCTTGTCTACGGTGC 485
| | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 587 TGGTAGAGGAGGATTCGGCTGTTCATCTGTGAATTCCTGCGACCTTCTTGTCTATGGTGC 646
Query 486 TGGCCAAGTTATACCGTCTTCATTCACTGTTCTTGAACAATATCTTAGATATTCTCTGCT 545
|||||||||||||||||||||||| || |||||||| ||||||||||||||||| |||||
Sbjct 647 TGGCCAAGTTATACCGTCTTCATTTACCGTTCTTGACCAATATCTTAGATATTCACTGCT 706
Query 546 TGTGGGATTATCTCCTGATGCTCAATATGGAAGGATTGTGTTGGTGATGAATAAGAGTGT 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 707 TGTGGGATTATCTCCTGATGCTCAATATGGAAGGATTGTGTTGGTGATGAATAAGAGTGT 766
Query 606 TTGTTCTGATAGAGCTGGTAACAATTTCAAAAGAGCTTTGGGTTCGCATTTCTTTGTCCA 665
||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 767 TTGTTCTGATATAGCTGGTAACAATTTTAAAAGAGCTTTGGGTTCGCGTTTCTTTGTCCA 826
Query 666 CTTTGATAGAAGAAACGTTTTTGTCAACCTACGAACTCATGTACCAGAGAAGTTACTTAA 725
|||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 827 TTTTGATAGAAGAAATGTTTTAGTCAATCTACGAACTCATGTACCAGAGAAGTTACTTAA 886
Query 726 GCTAAACAACCAAACTAGGACGGTGCAGGCAACCAATAATAACAACAAGCTGAATGTTTA 785
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 887 GCTAAACAACCAAACTAGGACGGTGCAGGCAACCAATGATAACAACAAGTTGAATGTTTA 946
Query 786 CTTGTATTTCTCTGAACCAGTACTGAATTCTTCAGCTGAAATTCTTAGACGACTAAACAC 845
|||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct 947 CTTGTATTTCTCTGAACCGGTACTGAATTCTTCGGCTGAAATTCTCAGACGACTAAACAC 1006
Query 846 AAACCAAGGTGATTTGCTTCCTATTGATGGAAATACCAACGGGAATCGCCGTTTCGCGTT 905
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1007 AAACCAAGGTGATTTGCTTCCTATCGACGGAAATACCAACGGGAATCGCCGTTTCGCGTT 1066
Query 906 TATGGTCAAAAATACATCACGGCGGGCTATAGTCACAGTGACCCTTGACTCGAATTCAAT 965
|||||||| ||||||||||||||| || |||||||| |||||||||||||||||||||||
Sbjct 1067 TATGGTCACAAATACATCACGGCGTGCAATAGTCACGGTGACCCTTGACTCGAATTCAAT 1126
Query 966 AAGAAGCAGACATGGGACACCTGCATCTCCAACTGCACCACTGACTTTTCTTTATG 1021
||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1127 TAGAAGCAGACATGGGACACCTGCATCTCCAACTGCACCACTCACTTTTCTTTATG 1182
Score = 828 bits (448), Expect = 0.0
Identities = 490/511 (96%), Gaps = 0/511 (0%)
Strand=Plus/Plus
Query 1021 GCCAACACAAGTACAATTTCTGTTAATATTCCTGAAAATGTTACTCAGGATGTCGCGGGA 1080
|||||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1371 GCCAACACCAGTACACTTTCTATTAAGATTCCTGAAAATGTTACTCAGGATGTCGCGGGA 1430
Query 1081 AACAAAAATCTTGCATCCAATATCCTAAAAGTAAAACATTATTCTGTGCCTATGTTATCT 1140
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct 1431 AACAAAAATCTTGCATCCAATATCCTAAAAGTGAAACATTATTCTGTGCCTATGATATCT 1490
Query 1141 TCTGTGATTTCTTGGGTAACAACTTATATTTTCTTGGTGACATCTTTCGTTGCGGGACTC 1200
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1491 TCTGTGATTTCTTGGGTAACAACTTACATTTTCTTGGTGACGTCTTTCGTTGCGGGACTC 1550
Query 1201 CTTACTCTTTCAACCACAAGCCTTTATTCTCTTGGTGCATTTCCAAGACCATCTCCTTAT 1260
|| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 1551 CTCACTCTTTCAACCACAAGCCTTTATTCTCTTGGCGCATTCCCAAGACCATCTCCTTAT 1610
Query 1261 CTGATATCAGACCCTACGAGGAACCTCTTTAGAACTGCCTGTCACATTCAGTTTTTTGCA 1320
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1611 CTGATATCAGACCCCACGAGGAACCTTTTTAGAACTGCCTGTCACATTCAGTTTTTTGCA 1670
Query 1321 CTCACGAGATGGTTACCGGTGACATTGCCTGTTGATTACTACGAACTTGTGAGAGGGATT 1380
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1671 CTCACGAGATGGCTACCGGTGACATTGCCTGTTGATTACTATGAACTTGTGAGAGGGATT 1730
Query 1381 CAATGGATAATCCCTTATTTTCCTCTCCCATGGGAAACTAAGAACAAGGAACAGATCATG 1440
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1731 CAGTGGATAATCCCTTATTTTCCTCTCCCATGGGAAACTAAGATCAAGGAACAGATCATG 1790
Query 1441 GTGGCCACAAGTCCTTACATTGGTCCACATTCCTTCATTTCTAAAACTCACAACAACATG 1500
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 1791 GTGGCCACAAGTCCTTACATTGGTCCACACTCCTTCATTTCTAAAACTCATAACAACATG 1850
Query 1501 ATTAATCTTCAGACATCAACCAACGCCGAGT 1531
||||||||| |||||||||||||||| ||||
Sbjct 1851 ATTAATCTTAAGACATCAACCAACGCGGAGT 1881
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 294733911739
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5