BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg323545 Length=1632 Score E Sequences producing significant alignments: (Bits) Value AT3G49640.1 | Symbols: | Aldolase-type TIM barrel family prote... 1668 0.0 AT3G49645.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 446 4e-124 > AT3G49640.1 | Symbols: | Aldolase-type TIM barrel family protein | chr3:18400306-18402869 REVERSE LENGTH=1224 Length=1224 Score = 1668 bits (903), Expect = 0.0 Identities = 1003/1051 (95%), Gaps = 8/1051 (1%) Strand=Plus/Plus Query 589 GGCGTCTTCGAATTTTTCGTGGCTGCGTTTGACGTTGCCAC------GAAGAAGACGAAG 642 |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||| Sbjct 1 GGCGTCTTCGAATTTTTCGTGGCTACGTTTGACGGTGCCACGAAGAAGAAGAAGACGAAG 60 Query 643 ATGGATTACCAGAACAAGCATGTCCTTGCTCCCATGGTTCGTGTGGGAACGCTCTCTTTC 702 |||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 61 ATGGATTATCAGAACAAGCTTGTTCTTGCTCCCATGGTTCGTGTGGGAACGCTCTCTTTC 120 Query 703 AGGATGTTGGCGGCCGAATACGGCGCCGATATCACATACAGTGAAGAGATTATCGATCAT 762 |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||| Sbjct 121 AGGATGTTGGCGGCGGAATACGGCGCCGATATCACATACGGTGAAGAGATTATTGATCAT 180 Query 763 AAGCTTGTTAAATGCGAACGTCGAATTAACGTTGCTTATGGGACAACTGAGTTTGTGGAG 822 |||||||||||||||||||| ||| | || ||||||| ||||||| |||||||||||||| Sbjct 181 AAGCTTGTTAAATGCGAACGCCGACTCAATGTTGCTTCTGGGACATCTGAGTTTGTGGAG 240 Query 823 AAAGGAACAGACAATGTCGTCTTTAGCACATGTAAAGAAGAGAGAAA-TAGAGTTGTTTT 881 ||||||||||| ||||| ||||||||||||||| | ||||| | ||| ||| |||||||| Sbjct 241 AAAGGAACAGATAATGTAGTCTTTAGCACATGTGATGAAGA-AAAAAGTAGGGTTGTTTT 299 Query 882 TCAAATGGGAACTTCTGATGCTGTTAGGGCTCTAAAAGCTGCTGAGATTGTGTGCAACGA 941 ||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| || || Sbjct 300 TCAGATGGGAACTTCTGATGCTGTTAGGGCTCTAAAGGCTTCTGAGATTGTGTGTAATGA 359 Query 942 CGTTGCAACTGTTGATATTAATATGGGTTGCCCCAAGGCGTTCTCTATCCAAGGAGGAAT 1001 |||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 360 CGTTGCAACTATTGATATTAATATGGGTTGCCCCAAGGCATTCTCTATCCAAGGTGGAAT 419 Query 1002 GGGTGCTGCTTTGTTAAGTAAACCCGAACTTATTCATGATATTTTGGCAACACTTAAGAG 1061 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 420 GGGTGCTGCTTTGTTAAGTAAACCCGAGCTAATTCATGATATTTTGGCAACACTTAAGAG 479 Query 1062 GAACTTAGACGTACCGGTTACTTGCAAGATTCGTTTATTAAAATCACCAGCAGATACTGT 1121 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 480 GAACTTAGACGTACCGGTTACTTGCAAGATTCGTCTATTAAAATCACCAGCAGATACTGT 539 Query 1122 TGAATTGGCTAGGAGAATCGAGAAGCTTGGTGTACCAGCTCTTGCTGTACATGGGAGGAA 1181 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 540 TGAATTGGCTAGGAGAATCGAGAAACTTGGTGTACCAGCTCTTGCTGTACATGGGAGGAA 599 Query 1182 AATTGCAGACAGGCCAAGAGATCCTGCTAAATGGGATGAGATTGCAGATGTGGTGGCAGC 1241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 AATTGCAGACAGGCCAAGAGATCCTGCTAAATGGGATGAGATTGCAGATGTGGTGGCAGC 659 Query 1242 ATTATCTATTCCCGTCATTGCAAATGGCGATGTTTTAGAATACGATGATTTTTCTCGCAT 1301 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 660 ATTATCCATTCCCGTCATTGCAAATGGCGATGTTTTAGAATATGATGATTTTTCTCGCAT 719 Query 1302 TAAAACTGCAACAGGCGCTGCATCAGTGATGGTTGCAAGAGGAGCTATGTGGAATGCTTC 1361 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 720 TAAAACCGCAACAGGCGCTGCATCAGTTATGGTTGCAAGAGGAGCTATGTGGAATGCTTC 779 Query 1362 AATTTTCTCTCCAAAAGGAAAATCACACTGGGAAGATGTGAAAAAGAAATACCTTAGAAA 1421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 AATTTTCTCTCCAAAAGGAAAATCACACTGGGAAGATGTGAAAAAGAAATACCTTAGAAA 839 Query 1422 GAGCATCTTGTGGAATAACGATGTCAAGAGCACGAAATACACGATAAAGGAGATGATAGC 1481 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 840 GAGCATCTTGTGGAATAACGATGTTAAGAGCACGAAATACACGATAAAGGAGATGATAGC 899 Query 1482 GCATCATTCTTGTCTTGAACTACCGGAAGGGAAGTCTATCAACAGAGCAGACACTTTAGA 1541 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 900 GCATCATTCTTGTCTTGAACTACCGGAAGGGAAGTCTATCAACAAAGCAGACACTTTAGA 959 Query 1542 AGATTTAGCGCGGCTTTACGATTTAGAAGATTACTTTTGGACAGTGAAGAACATTGGTCC 1601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 960 AGATTTAGCGCGGCTTTACGATTTAGAAGATTACTTTTGGACAGTGAAGAACATTGGTCC 1019 Query 1602 ACTGACACATGACTTAAATCATGTTTTATGA 1632 |||||||||| ||||||| |||||||||||| Sbjct 1020 ACTGACACATAACTTAAACCATGTTTTATGA 1050 > AT3G49645.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:18403002-18404788 REVERSE LENGTH=892 Length=892 Score = 446 bits (241), Expect = 4e-124 Identities = 284/305 (93%), Gaps = 1/305 (0%) Strand=Plus/Plus Query 285 AGCCAAAAGCTTGTTAATTGAGCTGGAGCATCTCACTGATGAGGCCGCTCTTGCAATTGA 344 |||||||| |||||| ||||||||||| | |||||||||||||||||| ||||||||||| Sbjct 414 AGCCAAAAACTTGTTGATTGAGCTGGAACGTCTCACTGATGAGGCCGCCCTTGCAATTGA 473 Query 345 GTCTGCCACGCAGCTAGATAAAGACTCAAGTAATGAATTGCGACAAGTTACGTGTGATGA 404 ||||||||| ||||||||||||||||||||| ||| ||||| |||||| || |||||||| Sbjct 474 GTCTGCCACACAGCTAGATAAAGACTCAAGTGATGGATTGCAACAAGTAACATGTGATGA 533 Query 405 GGAGAACGGGACTGCACAATTACCTCAAGGACCTGAAGTTACAGAGTACGCTGCACTTAT 464 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 534 GGAGAACGAGACTGTACAATTACCTCAAGGACCTGAAGTTACAGAGTACGCTGCACTTAT 593 Query 465 CGCAGTAATTTACAATATGATGAAGCAGAACTATGCGATGCAGGAAAAGATTGTGAGATC 524 ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||| Sbjct 594 TGCAGTTATTTACAGTATGATGAAGCAGAACTATGTTATGCAGGATAAGATTGTGAGATC 653 Query 525 GCTTAGTTTGAAGTCATCATCTGGTGAGCTAGAGAGTTACAGTCTGATGTGGTCATTGCG 584 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 654 GCTTAGTTTGAAGTCATCATCTGGTGAGCTAGAGACTTACAGTCTGATGTGGTCATTGCG 713 Query 585 TCCCG 589 |||| Sbjct 714 -CCCG 717 Score = 390 bits (211), Expect = 2e-107 Identities = 252/272 (93%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 1 ATGGAAACTAGAATCA-AACAGAAGAAGAAAATATCCGAGATTTTCAAAGATTTTATGAC 59 |||||||| ||||| | ||| |||||||||||| ||||||||||||||||| |||||||| Sbjct 103 ATGGAAACGAGAAT-AGAACTGAAGAAGAAAATTTCCGAGATTTTCAAAGACTTTATGAC 161 Query 60 AGGAATCACACAGCTTGAGGAACTAGGGAATGCTGCAAACAACTTTCTTCTTCGGTTTCA 119 || |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 162 AGTAATCACGCAGCTTGAAGAACTAGGGAATGCTGCAAACAACTTTCTTCTACGGTTTCA 221 Query 120 GCAAGGACTAAGTTTTCTTCAACGCCCTCCAATGGTTACTTCGTCTAAGTTGATGGAGAA 179 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct 222 GCAAGGACTAAGTTTTCTTCAACGCCCTCCAATAGTTACTTCGTCCAAGTTGATTGAGAA 281 Query 180 CATTATCAAGAAGAATGAAACTCGACGGCTTAAATCATATATGGAAGCAGGATGTATTAA 239 ||||||||||||||||||||| | ||||||||||||||||| || |||||||||||||| Sbjct 282 CATTATCAAGAAGAATGAAACAAGGCGGCTTAAATCATATATCGAGGCAGGATGTATTAA 341 Query 240 TATCCATGATGCGGCACAAAGTACAAGAGCTT 271 |||||||||||| |||||||| |||||||||| Sbjct 342 TATCCATGATGCTGCACAAAGCACAAGAGCTT 373 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80622075270 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5