BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg323579 Length=291 Score E Sequences producing significant alignments: (Bits) Value AT3G50020.1 | Symbols: | Serine protease inhibitor, potato inh... 411 2e-114 > AT3G50020.1 | Symbols: | Serine protease inhibitor, potato inhibitor I-type family protein | chr3:18542165-18542687 REVERSE LENGTH=291 Length=291 Score = 411 bits (222), Expect = 2e-114 Identities = 270/293 (92%), Gaps = 4/293 (1%) Strand=Plus/Plus Query 1 ATGAATCGTAGTTGTCCGATCTTTGGTCCTCCGTGTCAACGCTGCAGCTGTGCTGGCATT 60 |||||||||| ||||||| ||| | ||||||||||||||||||||||||||||||||||| Sbjct 1 ATGAATCGTAATTGTCCGCTCTATAGTCCTCCGTGTCAACGCTGCAGCTGTGCTGGCATT 60 Query 61 TCGTGCCAACCTCTATTTCCAGGAATGAAGGTGGAATGGCCAGAACTAACA-GGAGTAA- 118 ||||||||||||||||||||||||| |||||||| ||||||||| ||| | ||||||| Sbjct 61 ACGTGCCAACCTCTATTTCCAGGAATTAAGGTGGATTGGCCAGAATTAA-ATGGAGTAAA 119 Query 119 GTGGACTTGAAGCTAAGAGAAGAATCGAACATGACAATCCAAAAGTGGTGGCTGTTATCA 178 | ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 120 G-GGACTTGAAGCTAAGAGAATAATCGAACATGACAATCCAAAAGTGGTGGTTGTTATCA 178 Query 179 TTCCCGATGATGTTGCTGTGGTAGCCATCAATTGTTGTAACCGTGTCATTCTCCGTGTTC 238 ||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct 179 TTCCCGATGATGTTGCTGTACTAGCCGTCAATTGTTGTAACCGTGTCATTGTCCGTGTTC 238 Query 239 CCGTTAACAACTGTCCCAATGGTCCTGTCCTTAATATTCCTCACGTCGGATGA 291 |||| |||||||||||||||||||||||| |||| |||||||| |||||||| Sbjct 239 CCGTCAACAACTGTCCCAATGGTCCTGTCAGTAATTTTCCTCACATCGGATGA 291 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13421488983 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5