BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg323632 Length=1128 Score E Sequences producing significant alignments: (Bits) Value AT3G50720.1 | Symbols: | Protein kinase superfamily protein | ... 1480 0.0 > AT3G50720.1 | Symbols: | Protein kinase superfamily protein | chr3:18847519-18849430 REVERSE LENGTH=1134 Length=1134 Score = 1480 bits (801), Expect = 0.0 Identities = 1028/1138 (90%), Gaps = 14/1138 (1%) Strand=Plus/Plus Query 1 ATGGCCATTGCCCCGACGATGATGCTTTATCCGAACTACCCTTTTTTCATGTCAGCGTTT 60 ||||||||| | ||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 1 ATGGCCATTTCTCCGACGATGATGCTTAATGCGAACTACCCTTTTTTCATGTCAGCGTTT 60 Query 61 GGCTCAGATGAC---AATGAT---TCTGGTGACCATTTCGATTTCAATATCAGCAAAGAG 114 |||||||||||| |||||| |||| | |||| ||||||||||||||||||| |||| Sbjct 61 GGCTCAGATGACAATAATGATGAGTCTGATAACCAGTTCGATTTCAATATCAGCAGAGAG 120 Query 115 TTGCTTCTCAACCCTAAAAACATCATGCTGGGAGAGATGATTGGAGAAGGAGGCAACTCC 174 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 121 TTGCTTCTCAACCCTAAAGACATCATGAGGGGAGAGATGATTGGAGAAGGAGGCAACTCC 180 Query 175 ATCGTCTACAAAGGCCTATTCAAAGGCACTATGCCTGTGGCGGTGAAGATAGTGCAGCCG 234 ||||| |||||||||| | ||||| || | | ||||||||||||||||||||||||||| Sbjct 181 ATCGTTTACAAAGGCCGACTCAAAAACATTGTTCCTGTGGCGGTGAAGATAGTGCAGCCG 240 Query 235 AGTAAAACATCTGCTGTAAGCATTCAACACAAACAACAGTTTCAAAAGGAGGTTCTGCTA 294 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 241 GGTAAAACATCTGCTGTAAGCATTCAGGACAAACAACAGTTTCAAAAGGAGGTTCTGGTA 300 Query 295 CTATCCTCGATGAAACATCTCAACATTGTGAGGTTTCTTGGAGCTTGCATAGAGCCACAA 354 |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| Sbjct 301 CTATCCTCGATGAAACATGAAAACATTGTCAGGTTTGTTGGAGCTTGCATAGAGCCACAA 360 Query 355 TTGATGATAGTTACCGAACTCGTAAGAGGTGGTACTCTTCAGAGGTTCATGTTGAACTCT 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TTGATGATAGTTACCGAACTCGTAAGAGGTGGTACTCTTCAGAGGTTCATGTTGAACTCT 420 Query 415 CGTCCGAGTCCTCTAGATCTAAAGACGTCACTAACCTTTGCTTTGGACATTTCTCGAGCC 474 || ||||||||||| ||||| ||| |||||||| ||||||||||||||||||||||||| Sbjct 421 CGCCCGAGTCCTCTTGATCTCAAGGTGTCACTAAGCTTTGCTTTGGACATTTCTCGAGCC 480 Query 475 ATGGAGTTTTTGCACTCAAAAGGCATCATTCACCGTGACCTAAATCCAAGGAATGTTTTG 534 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 ATGGAGTATTTGCACTCAAAAGGCATCATTCACCGTGACCTAAATCCAAGGAATGTTTTG 540 Query 535 GTAACTGGTGATATGCATCATGTGAAGTTGGCTGATTTTGGACTTGCAAGAGAAAAGACT 594 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 541 GTAACTGGTGATATGAAACATGTGAAGTTGGCTGATTTTGGACTTGCAAGAGAAAAGACT 600 Query 595 GTAGGTGGCATGACTTGTGAGGCGGGAACATATCGATGGATGGCTCCTGAGGTATGCAGC 654 | ||||||||||||||||||||||| || || || ||||||||||| |||||||||||| Sbjct 601 CTTGGTGGCATGACTTGTGAGGCGGGCACGTACCGTTGGATGGCTCCAGAGGTATGCAGC 660 Query 655 CGTGAGCCACTCCTAATTGGGGAGAAAAAACACTACGACCACAAGATAGACGTTTATAGC 714 ||||||||||||| ||||||||||||||||||||||||||| || || || || |||||| Sbjct 661 CGTGAGCCACTCCGAATTGGGGAGAAAAAACACTACGACCAGAAAATCGATGTGTATAGC 720 Query 715 TTCGCATTGATTTTCTGGTCGTTGCTCACTAACCAGACACCATTCTA-TGGGATGGATGG 773 |||||| ||||||||||||| |||||||| ||| | ||||| ||| | || ||| | | Sbjct 721 TTCGCACTGATTTTCTGGTCCTTGCTCACAAACAAAACACCTTTC-AGTGAGATACCTAG 779 Query 774 TATTTCTATTCCCTATTTTGTGAACCAGGGCATGAGACCAAGCCTAATT-AATATTCCTG 832 ||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||| Sbjct 780 CATTTCTATTCCCTATTTTGTGAACCAGGGCAAGAGACCAAGCCTA-TCGAATATTCCTG 838 Query 833 ATGAGGTCGTACCAATTTTGGAATCGT-GCTGGGCCGAAGACTCAAAGAATCGTCTTGAA 891 |||||||||| || || || |||| || | ||||| | |||||||||| |||||| ||| Sbjct 839 ATGAGGTCGTCCCCATATTAGAAT-GTTGTTGGGCAGCGGACTCAAAGACTCGTCTCGAA 897 Query 892 TTCAAAGAGATTACTATCTT-CTTGGAAAGCTTGCTAAAAAGACTCTGCCCAGAGAGTAG 950 |||||||| ||||| |||| || ||||||||||||||||||| ||||| ||||||| || Sbjct 898 TTCAAAGATATTACAATCTCACT-GGAAAGCTTGCTAAAAAGATTCTGCTCAGAGAGAAG 956 Query 951 TAATGATGATATAACGGTAACAGACGATGAGGCTTATGATGATGAGATAGAGGAATTGGA 1010 |||| |||| |||||| | || || ||||| ||||||||||||||||||||||||||||| Sbjct 957 TAATAATGAGATAACGATCACCGAAGATGAAGCTTATGATGATGAGATAGAGGAATTGGA 1016 Query 1011 GACCACTTGGCTGCTTGGAAAGCGCTATATCAAGCTGAACAAACCTAAGAAGAAGAAGGA 1070 |||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| | Sbjct 1017 GACCACTTGGCTGCTTCCAAAGCGCTATATCAAGCTGAAGAAACCTAAGAAGATCAAGCA 1076 Query 1071 GAAAGTGATGAAGAGGATACTTCCTTTCTTCAAGAAGTTCTTTTCTTCAAAGTGGTGA 1128 ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1077 GAACGTGATGAAGAAGATACTTCCTTTCTTCAAGAAGTTCATTTCTTCAAAGTGGTGA 1134 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55321000590 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5