BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323710
Length=3756
Score E
Sequences producing significant alignments: (Bits) Value
AT3G51560.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 5912 0.0
AT5G45210.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 89.8 2e-16
> AT3G51560.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:19121808-19125913 REVERSE LENGTH=3762
Length=3762
Score = 5912 bits (3201), Expect = 0.0
Identities = 3583/3769 (95%), Gaps = 20/3769 (1%)
Strand=Plus/Plus
Query 1 ATGGTGGATTGCAGCGATGTTTACATCAGCTTCGATAGAAGAGAGGATACGGTAG-AGTA 59
||||||||||||||||||||||||||||||||||| ||||| ||||||||||| | |||
Sbjct 1 ATGGTGGATTGCAGCGATGTTTACATCAGCTTCGACAGAAGTGAGGATACGGT-GCGGTA 59
Query 60 CTCTTTTGTCAGCCACCTCTTCGCCGCTTTCCACCGCAGAGGAGTATCTTCGTTCACCGG 119
|||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| | |
Sbjct 60 CTCTTTTGTCAGCCACCTCTGCGCCGCTTTCCGCCGCAGAGGAATATCTTCGTTCATCAG 119
Query 120 AGAACACGGCTCCGATTCGGAAACCAATGGATTCTCCAAGTTGGAGAAGTCTAGGGCTTC 179
|||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 120 AGAAAACGGCTCCGATTCGGAAAGCAATGGATTCTCCAAGTTGGAGACGTCTAGGGCTTC 179
Query 180 TGTAGTCGTTTTCTCTGAGAAATACCCGTCATCTAAGTCATGCATGGAGGAGCTGCTCAA 239
|||||| |||||||||||||||||| ||||||| ||||||||||||||||||||| ||||
Sbjct 180 TGTAGTGGTTTTCTCTGAGAAATACTCGTCATCCAAGTCATGCATGGAGGAGCTGGTCAA 239
Query 240 GGTTTCCGAACACCGGAGAAAAAATTGTCTCGCGGTGGTTCCGGTGTTTTACCCAGTCAC 299
||||||||||| |||| | ||||| |||||||||||||||||||| ||||||||||||||
Sbjct 240 GGTTTCCGAACGCCGGCGGAAAAACTGTCTCGCGGTGGTTCCGGTATTTTACCCAGTCAC 299
Query 300 GAAATCGTTTGTGAAGAAACAAATCTGCAATTTGGCCGATGTTAGAAGCGATTGGCGAAC 359
|||||||||| |||||||||||||||| ||||||| |||||||||||||||||||| ||
Sbjct 300 GAAATCGTTTATGAAGAAACAAATCTGGAATTTGGGCGATGTTAGAAGCGATTGGCCAAG 359
Query 360 TGCTCTATTGGAAACTGTAGACTTACCAGGCCACGAGTTATACGATACGCAAAGTGACTC 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TGCTCTATTGGAAACTGTAGACTTACCAGGCCACGAGTTATACGATACGCAAAGTGACTC 419
Query 420 TGACTTTGTGGTGGAGATTGTGGCTGATGTGCGTGAGAAGCTCAACATGACAGACAATAT 479
||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 420 TGACTTTGTGGAGGAGATTGTGGCTGATGTGCGTGAAAAGCTCAACATGTCAGACAATAT 479
Query 480 TGGAATCTACTCAAAGTTGGGCAAGATAGAAACATTGATTTACAAGCAACCATGGGGTGT 539
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 480 TGGAATCTACTCAAAGTTGGGGAAGATAGAAACATTGATTTACAAGCAACCGTGGGGTGT 539
Query 540 CCGCAGCATAGGAATATGGGGAATGCCCGGCATAGGCAAGACGACTCTTGCTAAAGCTGC 599
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 540 CCGCAGCATAGGAATATGGGGAATGCCCGGCATAGGCAAGACAACTCTTGCTAAAGCTGC 599
Query 600 TTTTGACCAACTCTCTGGTGACTATGAGGCTTCTTGTTTCATCAGAGACTTTCACAAGGC 659
|||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 600 TTTTGACCAACTCTCTGGTGACTATGAGGCTTCTTGTTTCATCAAAGACTTTAACAAGGC 659
Query 660 GTTTCATGAGAAGGGACTTTATGGTTTGTTAGAGGTACATTTTGGGAAAATTCTTAGGGA 719
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 660 GTTTCATGAGAAGGGACTTTATGGTTTGTTAGAGGCACACTTTGGGAAAATTCTTAGGGA 719
Query 720 AGAGCTTGGCATAAACAGTTCCATTACAAGACCGATCCTCCTTACAAATGTTTTACGCCA 779
||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 720 AGAGCTTGGCATAAAAAGTTCGATTACAAGACCGATCCTCCTTAGAAATGTTTTACGCCA 779
Query 780 TAAAAGAGTTCTTGTTGTTCTTGATGATGTGTGCAAGCCTCTAGATGCAGAGTCGTTTCT 839
||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 780 TAAAAGAGTTCTTGTCGTTCTTGATGATGTGTGTAAGCCTCTAGATGCAGAGTCCTTTCT 839
Query 840 TGGAGGGTTTGATTGGTTTTGTCCGGGAAGTTTGATCATCATAACTTCAAGAGATAAACA 899
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 840 TGGAGGGTTTGATTGGTTTTGTCCGGGAAGCTTGATCATCATAACTTCAAGAGATAAACA 899
Query 900 AGTGTTTTCTCTATGTCGGGTCAATCAGATATATGAGGTTCCAGGTTTAAATGAGGAAGA 959
||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 900 AGTATTTTCTATATGTCGGGTCGATCAGATATATGAGGTTCCAGGTTTAAATGAGGAAGA 959
Query 960 GGCTCTACAGCTATTCTCGCGGTGTGCATTTGGAAAGGACATTAGAAATGAGACTCTT-C 1018
|||||| ||||||||||||||||||||||| |||||||| |||| | |||||| | || |
Sbjct 960 GGCTCTGCAGCTATTCTCGCGGTGTGCATTCGGAAAGGAGATTATACATGAGAGT-TTGC 1018
Query 1019 AGAAACTATCAATGAAAGTGATTAACTATGCTAATGGAAATCCTTTAGTTCTGACttttt 1078
|||||||||||| |||||||||| | |||||||||||||||||||||| ||||| |||||
Sbjct 1019 AGAAACTATCAAAGAAAGTGATTGATTATGCTAATGGAAATCCTTTAGCTCTGATTTTTT 1078
Query 1079 ttGGATGTATGTCAAGGGAGAATCCTAGACTTAGAGAGA-TGACATTCCTCAAACTCAAG 1137
||||||||||||||||| ||||||||| || || ||||| || |||||| |||| |||||
Sbjct 1079 TTGGATGTATGTCAAGGAAGAATCCTAAACCTATAGAGATTG-CATTCCCCAAAGTCAAG 1137
Query 1138 AAATATCTGGCACATGAGATTCATGATGCAGTCAAGAGCACATATGATTCGCTCAGTTCC 1197
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1138 AAATATCTGGCACATGAGATTCATGATGCAGTCAAGAGTACATATGATTCGCTTAGTTCC 1197
Query 1198 AACGAGAAGAACATATTTCTTGATATTGCGTGTCTTTTCAGAGGAGAAAATGTCGATTGT 1257
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1198 AACGAGAAGAACATATTTCTTGATATTGCGTGTCTTTTCAGAGGAGAAAATGTCGACTGT 1257
Query 1258 GTGATGCATCTGCTTGAGGGATGTGGTTTCTTTTCACGTGTTGAAATCAATGTTCTTGTT 1317
|| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1258 GTAATACATCTGCTTGAGGGATGTGGTTTCTTTCCACGTGTTGAAATCAATGTTCTTGTT 1317
Query 1318 GAGAAGTGTTTGGTGAGTATCGCAGAAGGCAGGGTGGTGATGCATAATTTGATCCAATCC 1377
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1318 GAGAAGTGTTTGGTGAGTATGGCAGAAGGCAGGGTTGTGATGCATAATTTGATCCAATCC 1377
Query 1378 ATAGGTCACGAAATTATCAATGGAGGAAAGAGGCGTTCCAGACTGTGGAAACCTTCAAGA 1437
||||||| | ||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1378 ATAGGTCGCAAAATTATCAATGGAGGAAAGAGGCGTTCCAGACTGTGGAAACCTTTGATA 1437
Query 1438 ATTAAGTATTTTCTAGAAGATACACAAGTTTTGGGTAGCGAAGATATTGAAGCCATATAT 1497
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |
Sbjct 1438 ATTAAGTATTTTCTAGAAGATAGACAAGTTTTGGGTAGTGAAGATATTGAAGCCATATTT 1497
Query 1498 CTGGACCCATCTGCCTTAAGCTTTGATGTCAATCCTCTGGCGTTTGAGAATATGTATAAT 1557
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1498 CTGGACCCATCTGCCTTAAGCTTTGATGTCAATCCTATGGCGTTTGAGAATATGTATAAT 1557
Query 1558 CTTAGATATCTGAAGATTTTCAGTTCCAATCCTGGAAACCATTCTGCTCTACACCTTCCC 1617
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1558 CTTAGATATCTGAAGATTTGCAGTTCCAATCCTGGAAACCATTATGCTCTACACCTTCCC 1617
Query 1618 AAAGGCGTCAAATCTCTACCGGAGGAGTTAAGGTTACTGCACTGGGAACAATTTCCATTG 1677
|| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1618 AAGGGCGTCAAATCCCTACCGGAGGAGTTAAGGTTACTGCACTGGGAACATTTTCCATTG 1677
Query 1678 TTATCCTTACCACAAGATTTCAACACTAGAAATCTTGTTATACTCAACATGTGTTACAGT 1737
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1678 TTATCCTTACCACAAGATTTTAACACTAGAAATCTTGTTATACTCAACATGTGTTACAGT 1737
Query 1738 AAAATTCAGAGACTTTGGGAAGGAACCAAGGAACTTGGGATGCTGAAAAGGATCATGCTT 1797
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1738 AAACTTCAGAGACTTTGGGAAGGAACCAAGGAACTTGGGATGCTGAAGAGGATCATGCTT 1797
Query 1798 TGTCATTCACAACAACTAGTTGATATTCAAGAACTCCAAAATGCTCGAAATATCGAGGTA 1857
|||||||||||||| ||||||| ||||||||||||||||| ||||| |||||| ||||||
Sbjct 1798 TGTCATTCACAACAGCTAGTTGGTATTCAAGAACTCCAAATTGCTCTAAATATGGAGGTA 1857
Query 1858 ATTGATCTCCAAGGTTGTGCAAGACTACAAAGATTTATAGCAACAGGTCATTTCCAGCAT 1917
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1858 ATTGATCTCCAAGGTTGTGCAAGACTACAAAGATTTCTAGCAACAGGTCATTTCCAGCAT 1917
Query 1918 CTTCGGGTGATAAATCTATCTGGTTGCATAAAGATCAAAAGTTTCCCAGAGGTTCCACCT 1977
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1918 CTTCGGGTGATAAATCTCTCTGGTTGCATAAAGATCAAAAGTTTCCCAGAGGTTCCACCT 1977
Query 1978 AATATTGAGGAGCTGTATCTCAAACAAACTGGCTTAAGATCAATACCAACTGTGATCTTC 2037
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1978 AATATTGAGGAGCTGTATCTCAAACAAACTGGCATAAGATCAATACCAACTGTGACCTTC 2037
Query 2038 TCTCCACAAGATAACTCATTTATTTATGATCATCAAGATCACAAGTTCTTGAACCGGGAG 2097
||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||
Sbjct 2038 TCTCCACAAGATAACTCATTTATTTATGATCATAAAGATCACAAATTCTTGAATCGGGAG 2097
Query 2098 GTCTCGTCTGAATCGCAAAGTCTGTCAATCATGGTTTATCTA-AAATACCTCAAAGTTCT 2156
||||||||||| |||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct 2098 GTCTCGTCTGATTCGCAAAGTCTGTCAATCATGGTTTATCTAGACA-ACCTCAAAGTTCT 2156
Query 2157 TGATCTTTCTCATTGCTTAGGGCTTGAGGATATTCACGGTATACCAAAAAACCTGAGAAA 2216
|||||||||||| ||||||| ||||||||||||||| ||||||||||||||||| |||||
Sbjct 2157 TGATCTTTCTCAATGCTTAGAGCTTGAGGATATTCAGGGTATACCAAAAAACCTAAGAAA 2216
Query 2217 GTTATATCTTGGTGGCACCGCCATACAAGAACTGCCTTCTCTCATGCATCTTTCTGAACT 2276
||||||||||||||| || |||||| ||||||||||||| ||||||||||||||||||||
Sbjct 2217 GTTATATCTTGGTGGTACAGCCATAAAAGAACTGCCTTCGCTCATGCATCTTTCTGAACT 2276
Query 2277 GGTTGTATTAGATTTGGAGAACTGCAAACGCCTTGAAAAGTTACCAATGGGAATAGGTAA 2336
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 2277 GGTTGTATTAGATTTGGAGAACTGCAAACGCCTTCACAAGTTACCAATGGGAATAGGTAA 2336
Query 2337 CTTGAGTTCTCTTGCGGTGCTT-AATCTCTCTGGATGCTCAGAGCTTGAGGATATTCAAG 2395
||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct 2337 CTTGAGTTCTCTTGCGGTG-TTAAATCTCTCTGGATGCTCAGAACTTGAGGATATTCAAG 2395
Query 2396 GTATCCCAAGAAACTTGGAAGAGTTATATCTTGCTGGCACCGCTATACAGGAAGTGCCAT 2455
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2396 GTATCCCAAGAAACTTGGAAGAGTTATATCTTGCTGGCACCGCTATACAGGAAGTGACAT 2455
Query 2456 CGTCAATCAAGCATCTCTCAGAACTTGTAGTTTTAGATTTACAGAACTGCAAAAGGCTTC 2515
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2456 CGTTAATCAAGCATCTCTCAGAACTTGTAGTTTTAGATTTACAGAATTGCAAAAGGCTTC 2515
Query 2516 GACATCTTCCGATGGAGATTGGTAACTTAAAATCTCTTGTCACACTTAAGCTAACGGATC 2575
||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2516 AACATCTTCCAATGGAGATTAGTAACTTAAAATCTCTTGTCACACTTAAGCTAACGGATC 2575
Query 2576 CATCTGGGATGTCCATAAGAGAAGTATCCACATCAATTATCCAGAATGGTATATCAGAAA 2635
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2576 CATCTGGGATGTCCATAAGAGAAGTATCAACATCAATTATCCAGAATGGTATATCAGAAA 2635
Query 2636 TTAACATCAGTAATTTGAATTATCTTCTCTTCACTGTCAATGAGAATGCAGATCAGCGTA 2695
|| ||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||
Sbjct 2636 TTGGCATCAGTAATTTGAATTATCTTCTCTTGACTTTCAATGAGAATGCAGAGCAGCGTA 2695
Query 2696 GAGAACATTTGCCTCAACCAAGGCTTCCATCTTCAAGTTTACATGGCTTGGTCCCAAGAT 2755
||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2696 GAGAATATTTGCCTCGACCAAGGCTGCCATCTTCAAGTTTACATGGCTTGGTCCCAAGAT 2755
Query 2756 TTTATGCCCTAGTATCTTTATCCCTCTTCAATGCATCCTTGATGCATATACCGGAAGAGA 2815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2756 TTTATGCCCTAGTATCTTTATCCCTCTTCAATGCATCCTTGATGCATATACCGGAAGAGA 2815
Query 2816 TTTGTTCCTTGCCTTCAGTAGTGCTGTTGGATCTTGGTCGGAATGGTTTCAGCAAAATCC 2875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2816 TTTGTTCCTTGCCTTCAGTAGTGCTGTTGGATCTTGGTCGGAATGGTTTCAGCAAAATCC 2875
Query 2876 CTGAAAGCATAAAGCAGTTATCTAAACTACATAGCCTTAGATTAAGACATTGTAGAAACC 2935
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2876 CTGAAAGCATAAAGCAGTTATCTAAACTACATAGCCTTAGATTAAGACATTGTAGAAACC 2935
Query 2936 TCATATCGCTTCCGGTGCTTCCCCAAAGCCTGAAACTCTTGAACGTGCATGGTTGTGTGT 2995
|||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2936 TCATATTGCTTCCGGCGCTTCCCCAAAGCCTGAAACTGTTGAACGTGCATGGTTGTGTGT 2995
Query 2996 CTCTAGAGTCAGTTTCTTGGGGATTTGAGCAGTTTCCTAGTCATTACACCTTCAGCGATT 3055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2996 CTCTAGAGTCAGTTTCTTGGGGATTTGAGCAGTTTCCTAGTCATTACACCTTCAGCGATT 3055
Query 3056 GCTTCAATAGGTCTCCAAAAGTGGCTAGAAAACGAGTTGTAAAAGGCCTGGCTAAAGTAG 3115
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3056 GCTTCAATAAGTCTCCAAAAGTGGCTAGAAAACGAGTTGTAAAAGGCCTGGCTAAAGTAG 3115
Query 3116 CAAGCATTGGCAACGAACGTCAGCAGGAACTCATCAAAGCACTTGCATTCAGCATTTGCG 3175
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3116 CAAGCATTGGCAACGAACATCAGCAGGAACTCATCAAAGCACTTGCATTCAGCATTTGCG 3175
Query 3176 G---TGCGGGAGCAGATCAGACATCCTCTTATAATTTGCGGGCAGGTCCATTTGCAACGA 3232
| ||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||
Sbjct 3176 GGCCTGCAGGAGCAGATCAGGCAACCTCTTATAATTTGCGGGCAGGTTCATTTGCAACGA 3235
Query 3233 TAGAGATAACTCCTTCCCTGCGGAAGACACTCTTGGGGTTTGCTATCTTCATTGTAGT-T 3291
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 3236 TAGAGATAACTCCTTCCCTGCGAAAGACACTCTTGGGGTTTGCTATCTTCGTTGTAGTAT 3295
Query 3292 ACGTTTTCGGATGATAGTCACAACAACGCTGGTCTTGGCGTTAGGTGCGTAAGCAGATGG 3351
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3296 -CGTTTTCGGATGATAGTCACAACAACGCTGGGCTTGGCGTTAGGTGCGTAAGCAGATGG 3354
Query 3352 AAGACTAAGAAAAGGGTC-TCTCA--TAGAGCAGAGAAAGTTTTTAGGTGTTGGGCTCCG 3408
||||| ||||||||||| || | || |||||||||||| ||||||||||||||||||
Sbjct 3355 AAGACAAAGAAAAGGGTGGTCACTGGTAAAGCAGAGAAAGTGTTTAGGTGTTGGGCTCCG 3414
Query 3409 AGAGAGGCTCCTGAGGTTCAAAGGGATCACATGTTTGTGTTTTATGAGGATGCCGAAACG 3468
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3415 AGAGAAGCTCCTGAGGTTCAAAGGGATCACATGTTTGTGTTTTATGAGGATGCCGAAATG 3474
Query 3469 CATCGAGGTGGTGGTGAGGGAAACAAACCAAATCTAA-GTTCTAATCACGTTGAATTTGA 3527
||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||
Sbjct 3475 CATCGAGGTGGTGGTGAGGGAAACAAACCAAATATAATGG-CTGATCACGTTGAATTTGA 3533
Query 3528 ATTCCAAGCAGTAAATGGGAGAAACAAGGTCTTAGGAAGTAATTGCATGGTGACAGAATG 3587
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 3534 ATTCCAAGCAGTAAATGGAAGAAACAAGGTCTTAGGCGGTAATTGCATGGTGACAGAATG 3593
Query 3588 TGATGTTTGTGTTATAACAGCTGCAACTGGTGCGACGAGTCTCAGTGTAACAAATGCTAG 3647
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||
Sbjct 3594 TGATGTTTGTGTTATAACAGCTGCAACTGGTGCGGCGAGTCTGAGTGTAACAAATGCAAG 3653
Query 3648 TAAGGACATGAGTTTAAGTAAGAATCATTCTCCAAAGCTTTCAAGTGTGCTTGCTAAGCT 3707
|||||| |||||||||||||||||||||||||| ||||||||||||||| ||| ||||||
Sbjct 3654 TAAGGATATGAGTTTAAGTAAGAATCATTCTCCGAAGCTTTCAAGTGTGATTGGTAAGCT 3713
Query 3708 TCAATTTAAGCGCCCTGGGAGGTTCGGTGGTTGTGTTTGCCTAGAGTGA 3756
|| ||||||||| ||| ||||| ||||||||||||||||||||||||
Sbjct 3714 TCGATTTAAGCGAGTTGGTAGGTTTGGTGGTTGTGTTTGCCTAGAGTGA 3762
> AT5G45210.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:18295521-18298434 FORWARD LENGTH=2094
Length=2094
Score = 89.8 bits (48), Expect = 2e-16
Identities = 133/173 (77%), Gaps = 10/173 (6%)
Strand=Plus/Plus
Query 1407 GAGGCGTTC-CAGACTGTGGAAACCTTCAAGAATTAAGTATT-TT-CTAGAAGATACACA 1463
|||||| || ||||| ||| |||| ||||||| | || ||| || |||||| || | |
Sbjct 1437 GAGGCG-TCGCAGACACTGGGAACCATCAAGAA-TCAG-ATTATTACTAGAAAAT-GATA 1492
Query 1464 AGT-TTTGGGTAGCGAAGATATTGAAGCCATATATCTGGACCCATCTGCCTTAAGCTTTG 1522
| | | ||| | |||| |||||||| || | ||| ||| || | |||| |||||
Sbjct 1493 AATCTAAGGGGAATGAAGTTATTGAAGGGATTTTTCTTGACACAACAAAATTAACCTTTG 1552
Query 1523 ATGTCAATCCTCTGGCGTTTGAGAATATGTATAATCTTAGA-TATCTGAAGAT 1574
|||| |||||| ||||||||||||||||||||||||||||| | | |||||||
Sbjct 1553 ATGTTAATCCTATGGCGTTTGAGAATATGTATAATCTTAGACTGT-TGAAGAT 1604
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 187072530447
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5