BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323719
Length=909
Score E
Sequences producing significant alignments: (Bits) Value
AT3G51680.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1349 0.0
> AT3G51680.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr3:19173622-19174667 REVERSE LENGTH=912
Length=912
Score = 1349 bits (730), Expect = 0.0
Identities = 850/908 (94%), Gaps = 7/908 (1%)
Strand=Plus/Plus
Query 7 GCCCAAGTGATCTCTGAGCAG---ACCTTTCACTCCATCCACGACACCAGGATGGAGGAG 63
|||||||||||| |||||||| |||||||||||| |||||||||||| |||||||||
Sbjct 7 GCCCAAGTGATCGCTGAGCAGACCACCTTTCACTCCGTCCACGACACCATTATGGAGGAG 66
Query 64 ACGAATACAACTTTATATCATAAGAGGTTGGAAGGAAAAGTAGCCATTATCACCGGAGGC 123
||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||
Sbjct 67 ACGAATACAACTTTATATCCTAAGAGGTTGGAAGGAAAAGTAGCCATCATAACCGGAGGC 126
Query 124 GCACATGGAATAGGCAAAGCAACTGTCATGCTATTCGCTAGACACGGTGCCACGGTGGTG 183
||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||
Sbjct 127 GCACATGGAATAGGCAAAGCAACCGTCATGTTATTCGCTAGACACGGTGCCACAGTGGTG 186
Query 184 ATTGCTGACGTGGACAATGTAGCTGGCTCTTCCCTGGCTAAGTCACTTTCATCCCACTTA 243
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
Sbjct 187 ATTGCTGACGTGGACAACGTAGCTGGCTCTTCCCTGGCTAAGTCACTCTCATCCCACAAA 246
Query 244 ACCGCCTTC-ACGGTGACATTCATTAGCTGCGATGTCTCAGTCGAAAG-CGACGTGGAAA 301
||| || | | |||| |||||||||||||||||||||| || | ||| |||||||||||
Sbjct 247 ACCTCC-CCGATGGTGGCATTCATTAGCTGCGATGTCTCCGTAG-AAGCCGACGTGGAAA 304
Query 302 ACCTCGTGAACGCAACGGTCGCGCGCTACGGTAGGCTTGACATTCTATTCAACAACGCAG 361
|||| ||||||| ||| || || || |||||||||||||||||||||||||||||||| |
Sbjct 305 ACCTTGTGAACGTAACCGTTGCACGGTACGGTAGGCTTGACATTCTATTCAACAACGCGG 364
Query 362 GAGTTCTCGGAGACCAGAAGAAACACAAAAGTATATTAGACTTCGACGCGGACGAGTTCG 421
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 365 GAGTTCTCGGAGATCAGAAGAAACACAAAAGCATATTAGACTTCGACGCGGACGAGTTTG 424
Query 422 ACCGCGTGATGCGTGTGAACGTGCGTGGCATAGGACTCGGCATGAAACACGCGGCACGTG 481
||| |||||||||||||||||| |||||| ||||||||||||||||||||| |||||| |
Sbjct 425 ACCACGTGATGCGTGTGAACGTACGTGGCGTAGGACTCGGCATGAAACACGGGGCACGCG 484
Query 482 CCATGATCAAGAGAGGGTTCAAAGGTTGCATAATCTCCACGGCGAGTGTAGCCGGTGTGA 541
| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 485 CTATGATCAAGAGAGGATTCAAAGGCTGCATAATCTCCACGGCGAGTGTAGCCGGTGTGA 544
Query 542 TGGGTGGAATGGGACCACACGCTTACACGGCCTCGAAACATGCGATCGTTGGTTTGACCA 601
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 545 TGGGTGGAATGGGACCACACGCTTACACAGCCTCGAAACATGCGATCGTTGGTTTGACCA 604
Query 602 AGAACGCAGCGTGTGAGCTAGGCAAGTATGGGATTAGGGTTAACTGTATATCACCGTTTG 661
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 605 AGAACGCAGCGTGTGAGCTAGGCAAGTATGGGATTAGGGTTAATTGTATATCACCGTTTG 664
Query 662 GTGTTGCCACGTCAATGCTGGTTAATGCGTGGCGAAAGACGAGTGGTGGTGACGTGGAAG 721
| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 665 GAGTTGCCACGTCGATGCTGGTTAACGCGTGGCGAAAGACGAGTGGTGGTGACGTGGAAG 724
Query 722 ATGATGAAGTGGAGGAGATGGAAGAGTTTGTGAGGAGTTTGGCTAATTTGAAAGGAGAGT 781
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 725 ATGATGACGTGGAGGAGATGGAGGAGTTTGTGAGGAGTTTGGCTAATTTGAAAGGAGAGA 784
Query 782 CTTTGAGAGCGAATGATATAGCTGAAGCAGCGTTATATTTGGCAAGTGATGAGTCTAAAT 841
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 785 CATTGAGAGCGAATGATATAGCTGAAGCAGCGTTATATTTGGCGAGTGATGAGTCTAAGT 844
Query 842 ATGTGAACGGACATAATCTTGTCGTTGACGGTGGTGTTACGACTGCAAGAAACTGTGTTG 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 ATGTGAACGGACATAATCTTGTCGTTGACGGTGGTGTTACGACTGCAAGAAACTGTGTTG 904
Query 902 GCTTATGA 909
| || |||
Sbjct 905 GTTTGTGA 912
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44406985948
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5