BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg323835 Length=1629 Score E Sequences producing significant alignments: (Bits) Value AT3G52910.1 | Symbols: AtGRF4, GRF4 | growth-regulating factor ... 1808 0.0 AT3G52905.1 | Symbols: | Polynucleotidyl transferase, ribonucl... 863 0.0 > AT3G52910.1 | Symbols: AtGRF4, GRF4 | growth-regulating factor 4 | chr3:19616021-19618449 REVERSE LENGTH=1480 Length=1480 Score = 1808 bits (979), Expect = 0.0 Identities = 1087/1135 (96%), Gaps = 24/1135 (2%) Strand=Plus/Plus Query 1 ATGGACTTGCAACTGAAACAATGGAGAAGTCAGCAGCAGAATGAGTCAGAAGAACAAGGC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 182 ATGGACTTGCAACTGAAACAATGGAGAAGTCAGCAGCAGAATGAGTCAGAAGAACAAGGC 241 Query 61 TCTGCTGCAACTAAGATATCAAACTTTTTCTTTGATCAGATTCAGTCCCAAACTGCAACT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 242 TCTGCTGCAACTAAGATATCAAACTTTTTCTTTGATCAGATTCAGTCCCAAACTGCTACT 301 Query 121 TCTGCTGCTGCGGctcctcttcctctctttgtccctgaacccacttcttcctcttctttc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 TCTGCTGCTGCGGCTCCTCTTCCTCTCTTTGTCCCTGAACCCACTTCTTCCTCTTCTTTC 361 Query 181 tcatgcttctctcctgactcttctaa--ct-cttcttcttcCAGGTTCCTCAAGATGGGA 237 || ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 362 TCTTGCTTCTCTCCTGACTCTTCTAATTCTTCTTCTTCTTCCAGGTTCCTCAAGATGGGA 421 Query 238 AACTTTTTCAGCTGGGCACAGTGGCAAGAACTTGAGCTACAAGCACTGATCTATAGATAC 297 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 422 AACTTCTTCAGCTGGGCACAGTGGCAAGAACTTGAGCTACAAGCACTGATCTATAGATAC 481 Query 298 ATGTTGGCTGGTGCTTCTGTTCCTCAAGAGCTTCTCTTACCTATCAAGAAAAGTCTCATC 357 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct 482 ATGTTGGCTGGTGCTTCTGTTCCTCAAGAGCTTCTCTTACCTATTAAGAAAAGTCTCCTC 541 Query 358 CATCAATCTCCTATGCATTTCCTTCACCATCCTCTTCAACATAGTTTTCCTCATCACCAA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 542 CATCAATCTCCTATGCATTTCCTTCACCATCCTCTTCAACATAGTTTTCCTCATCACCAA 601 Query 418 CCTTCTTGGTACTGGGGAAGAGGAGCAATGGATCCTGAGCCAGGGAGGTGCAAGAGAACA 477 ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 602 CCTTCTTGGTATTGGGGAAGAGGAGCAATGGATCCTGAGCCAGGGAGGTGTAAGAGAACT 661 Query 478 GACGGCAAGAAATGGAGATGTTCAAGGGATGTTGTAGCCGGCCACAAGTATTGTGACCGC 537 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 662 GACGGCAAGAAATGGAGATGTTCAAGGGATGTTGTAGCGGGCCACAAGTATTGTGACCGC 721 Query 538 CACATCCACCGTGGAAGAAACCGTTCAAGAAAGCCTGTGGAAACCGCCACAACCACCACC 597 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 722 CACATTCACCGTGGAAGAAACCGTTCAAGAAAGCCTGTGGAAACCGCCACAACCACCATC 781 Query 598 ACAACAACAGCCACAACAACCGCATCTTCTTTTGTCTTAGGAGAGGAGCTTGGTCATGGA 657 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 782 ACAACGACAGCCACAACAACCGCATCTTCTTTTGTCTTAGGTGAGGAGCTTGGTCATGGA 841 Query 658 CCAAACAACA-CC--T-CT--------GGTTCATCTCAACATCTCCACCTTAGTCATCAA 705 |||||||||| || | || ||||||||||||| ||||||||||||||||||| Sbjct 842 CCAAACAACAACCACTTCTTCTCCTCTGGTTCATCTCAACCTCTCCACCTTAGTCATCAA 901 Query 706 CAAAGTTGTTCTTCAGAGATGAAACAAGAAAGCAACAACAACAAGAGGCCATATGAAGCT 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 902 CAAAGTTGTTCTTCAGAGATGAAACAAGAAAGCAACAACAACAAGAGGCCATATGAAGCT 961 Query 766 AACAATGGATTCAACAATGGAAGATCAGACGATGGTCACATCTTGAGGCATTTCTTTGAC 825 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 962 AACAGTGGATTCAGCAATGGAAGATCAGACGATGGTCACATCTTGAGGCATTTCTTTGAC 1021 Query 826 GATTGGCCACGATCATCGGACTCTACTTCCAGTCCAATGAGCTCATCCACTTGTCATCTT 885 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1022 GATTGGCCACGATCATCAGACTCTACCTCCAGTCCAATGAGCTCATCCACTTGTCATCTT 1081 Query 886 TCAATCTCCATGCCCGGTAACCGTAACGCTTCCTCAGATGTTTCTCTAAAACTTTCCACA 945 ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| Sbjct 1082 TCAATCTCCATGCCCGGTAAC---AACACGTCCTCAGATGTTTCTCTAAAACTTTCCACA 1138 Query 946 GGCAATGAAGAAGAAGAAGAGAACATGAGAAA---CAACAATGAGAGGGAGCAATTGAAT 1002 |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct 1139 GGCAATGAAGAAGAAGAAGAGAACATGAGAAATAACAACAATGAGAGGGAGCAAATGAAT 1198 Query 1003 TGGTGGAGCAATGGAGGGAACCACCACAA---TATGGGAGGACCATTAGCTGAGGCTTTG 1059 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 1199 TGGTGGAGCAATGGAGGGAATCACCACAACAATATGGGAGGACCATTAGCTGAGGCTTTG 1258 Query 1060 AGGTCAGCTTCTTCGACGTCTAGTGTTCTTCATCAGATGGGAATCTCAACTCAAG 1114 |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 1259 AGGTCAGCTTCTTCGACGTCAAGTGTTCTTCATCAGATGGGAATCTCTACTCAAG 1313 > AT3G52905.1 | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:19614007-19615745 REVERSE LENGTH=742 Length=742 Score = 863 bits (467), Expect = 0.0 Identities = 501/518 (97%), Gaps = 0/518 (0%) Strand=Plus/Plus Query 1112 AAGAAATGAAGTATGTGAAGCCATTGAGCTTATTGGGTAATGCGTTGAAGACAAAAGTAT 1171 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | Sbjct 90 AAGAAATGAAGTATGTGAAGCCATTGAGCTTATTGGGTAATGCGCTGAAGACCAAAGTGT 149 Query 1172 CAGTCCCTGGTCGGTTTCTGGGTTTAGATGTTGGTGATAAGTATGTTGGATTAGCTATCT 1231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 150 CAGTCCCTGGTCGGTTTCTGGGTTTAGATGTTGGTGATAAGTATGTTGGATTAGCTATCT 209 Query 1232 CAGATCCTTCAAATATGGTTGCTTCTCCATTGAGTGTTCTGCTCAGGAAGAAAACAAACA 1291 |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||| Sbjct 210 CAGATCCTTCAAATATGGTTGCTTCTCCATTGAGTGTTTTGCTCAGAAAGAAATCAAACA 269 Query 1292 TTGACTTGATGGCTACAGATTTTCAGAACCTGGTCAAAGCATTTTCTGTGTCGGGCTTAG 1351 ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 270 TTGACCTGATGGCTACAGATTTCCAGAACCTGGTCAAAGCATTTTCTGTGTCGGGATTAG 329 Query 1352 TCGTTGGTTATCCATTTGGCAAACTGAACAATGTAGAGGATGTTGTCACTGTGAATCTTT 1411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 330 TCGTTGGTTATCCATTTGGCAAACTGAACAATGTAGAGGATGTTGTCACTGTGAATCTTT 389 Query 1412 TCATTGAGGAACTTCGTAAAACCGAAAAACTCAAGGATGTGAAATACACATATTGGGACG 1471 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 390 TCATTGAGGAACTTCGTAAGACCGAAAAACTCAAGGATGTGAAATACACATATTGGGACG 449 Query 1472 AGCGGTTATCATCAAAGACCGTTGAACTGATGCTGAAGCCCTTAAATTTGCATCCCGTTC 1531 |||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| Sbjct 450 AGCGATTATCATCAAAGACCGTTGAACTGATGTTGAAGCCCTTGAATTTGCATCCTGTTC 509 Query 1532 AAGAGAAGACAATGCTGGACAAGTTAGCCGCAGTAGTTATACTTCAGGAGTATCTAGATT 1591 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 510 AAGAGAAGACAATGTTGGACAAGTTAGCCGCAGTAGTTATACTTCAGGAGTATTTAGATT 569 Query 1592 ATGCGAACAGGTATGTAAACACTGAGCCAGCAGAGTAA 1629 | |||||||||||||||||||||||||||||||||||| Sbjct 570 ACGCGAACAGGTATGTAAACACTGAGCCAGCAGAGTAA 607 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80471473635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5