BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323914
Length=1284
Score E
Sequences producing significant alignments: (Bits) Value
AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915288-19917641 ... 2078 0.0
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-157... 1415 0.0
AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837 ... 955 0.0
AT2G42170.1 | Symbols: | Actin family protein | chr2:17577714-... 466 2e-130
> AT3G53750.1 | Symbols: ACT3 | actin 3 | chr3:19915288-19917641
FORWARD LENGTH=1557
Length=1557
Score = 2078 bits (1125), Expect = 0.0
Identities = 1248/1304 (96%), Gaps = 21/1304 (2%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCCCTTGTCTGTGACAACGGAACTGGAATGGTTAAG 60
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 154 ATGGCTGATGGTGAAGATATTCAACCCCTTGTCTGTGACAATGGAACTGGAATGGTTAAG 213
Query 61 GCTGGTTTTGCTGGGGATGATGCACCGAGGGCTGTGTTTCCAAGTATTGTTGGCCGTCCT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 GCTGGTTTTGCTGGGGATGATGCACCGAGGGCTGTGTTTCCAAGTATTGTTGGCCGTCCT 273
Query 121 CGCCACACTGGAGTGATGGTTGGAATGGGACAGAAGGATGCATATGTTGGCGATGAAGCT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274 CGCCACACTGGAGTGATGGTTGGAATGGGACAGAAGGATGCATATGTTGGCGATGAAGCT 333
Query 181 CAATCCAAGCGTGGTATTCTAACCCTTAAATACCCAATTGAGCACGGTATTGTCAACAAT 240
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 334 CAATCCAAGCGTGGTATTCTTACCCTTAAATACCCTATTGAGCACGGTATTGTCAACAAT 393
Query 241 TGGGATGATATGGAAAAAATATGGCATCATACTTTCTACAATGAGCTCCGTGTTGCTCCT 300
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 394 TGGGATGATATGGAAAAAATCTGGCATCATACTTTCTACAATGAGCTCCGTGTTGCTCCC 453
Query 301 GAGGAGCATCCCATTTTACTCACTGAAGCACCTCTTAACCCAAAGGCTAACCGTGAGAAG 360
||||||||||| ||| | ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 454 GAGGAGCATCCTATTCTGCTCACTGAAGCGCCTCTTAACCCAAAGGCTAACCGTGAGAAG 513
Query 361 ATGACTCAGATCATGTTTGAAACCTTTAATGCTCCTGCCATGTATGTCGCCATTCAAGCT 420
||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 514 ATGACTCAGATCATGTTTGAAACCTTTAACGCTCCGGCTATGTATGTCGCCATTCAAGCT 573
Query 421 GTCCTGTCACTTTATGCTAGTGGCCGTACTACGGGTATTGTGCTCGACTCTGGAGATGGT 480
|||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct 574 GTCCTGTCGCTTTATGCTAGTGGTCGTACTACTGGTATTGTGCTTGACTCTGGAGATGGT 633
Query 481 GTGAGTCACACGGTCCCTATCTATGAGGGTTACGCTCTTCCGCATGCCATCCTACGTCTT 540
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 634 GTGAGTCACACGGTCCCTATCTATGAGGGTTACGCTCTCCCGCATGCAATCCTACGTCTT 693
Query 541 GATCTTGCAGGTCGTGACCTGACAGATGCTCTGATGAAGATCCTCACTGAGCGTGGTTAC 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 694 GATCTTGCAGGTCGTGACCTCACAGATGCTCTGATGAAGATCCTCACTGAGCGTGGTTAC 753
Query 601 TCTTTCACCACAACAGCTGAGCGTGAAATTGTCAGAGACATCAAGGAGAAGCTTTGCTAC 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 TCTTTCACCACAACAGCTGAGCGTGAAATTGTCAGAGACATCAAGGAGAAGCTTTGCTAC 813
Query 661 ATTGCCCTTGACTACGAGCAGGAGCTTGAGACGGCTAAAACCAGCTCTGCTGTTGAGAAG 720
||||| |||||||| ||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 814 ATTGCTCTTGACTATGAGCAGGAGCTTGAGACGGCTAAAACCAGCTCTTCTGTAGAGAAG 873
Query 721 AACTATGAGTTACCTGATGGGCAAGTGATCACCATTGGATCTGAGCGTTTCCGTTGCCCA 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 874 AACTATGAGTTACCTGATGGGCAAGTGATCACCATTGGATCTGAGCGTTTCCGTTGCCCT 933
Query 781 GAGGTTCTTTACCAGCCATCTATGATCGGTATGGAGAATGCTGGTATCCATGAAACCACC 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 934 GAGGTTCTTTACCAGCCATCTATGATCGGTATGGAGAATGCTGGTATCCATGAAACCACC 993
Query 841 TACAACTCCATAATGAAATGTGATGTTGACATCAGAAAGGACTTGTATGGTAACATTGTG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 994 TACAACTCCATAATGAAATGTGATGTTGACATCAGAAAGGACTTGTATGGTAACATTGTG 1053
Query 901 CTCAGTGGTGGAACAACTATGTTCCCTGGAATTGCTGACAGAATGAGCAAAGAGATCACT 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1054 CTCAGTGGTGGAACAACTATGTTCCCTGGAATTGCTGACAGAATGAGCAAAGAGATCACT 1113
Query 961 GCTTTGGCACCGAGCAGCATGAAGATCAAAGTCGTTGCACCGCCGGAGAGGAAATACTCT 1020
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1114 GCTTTGGCACCGAGCAGCATGAAGATCAAAGTCGTTGCACCTCCTGAGAGGAAATACTCT 1173
Query 1021 GTCTGGATTGGAGGATCCATCTTGGCCTCCCTCAGTACCTTCCAGCAGA-----AT---A 1072
||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1174 GTCTGGATTGGAGGATCCATCTTGGCCTCCCTCAGTACCTTCCAGCAGATGTGGATCGCA 1233
Query 1073 ---------T--GATGAGTCAGGCCCGTCGATTGTTCACCGGAAATGCTTTTGAGTTTGA 1121
| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1234 AAGGCAGAATATGATGAGTCAGGCCCGTCGATTGTTCACCGGAAATGCTTTTGAGCTTGA 1293
Query 1122 AGTTAAGTCTGCTTCCGGAGAAGCCCTGGGGGTTTTCCAATTTATCCTTACTGGGTTTTT 1181
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 1294 AGTTAAGTCTGCTTCCGGAGAAGCCCTGGGGGTTTTCCAGTTTGTCCTTACTGGGTTTTT 1353
Query 1182 ATCTTCGTTCTCTGCTGTTCTTTGTTTTTGTTCTTCAATATTTTCAGATTCTGGCCTAAG 1241
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1354 ATCTTCGTTCTCTGCTCTTCTTTGTTTTTCTTCTTCAATATTTTCAGATTCTGGCCTAAG 1413
Query 1242 ACATATTGAAGAACTCACATTATCTGTTTGTAGTTGT-GGTTAA 1284
|||| |||||||| | |||||||||||||||||| || ||||||
Sbjct 1414 ACATTTTGAAGAATTTACATTATCTGTTTGTAGT-GTTGGTTAA 1456
> AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-15781561
FORWARD LENGTH=1618
Length=1618
Score = 1415 bits (766), Expect = 0.0
Identities = 971/1072 (91%), Gaps = 6/1072 (1%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCCCTTGTCTGTGACAACGGAACTGGAATGGTTAAG 60
|||||||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||
Sbjct 165 ATGGCTGATGGTGAAGACATTCAACCTCTTGTTTGCGACAATGGAACTGGAATGGTTAAG 224
Query 61 GCTGGTTTTGCTGGGGATGATGCACCGAGGGCTGTGTTTCCAAGTATTGTTGGCCGTCCT 120
|||||||||||||||||||||||||| || ||||||||||| |||||||| || ||||||
Sbjct 225 GCTGGTTTTGCTGGGGATGATGCACCTAGAGCTGTGTTTCCTAGTATTGTGGGTCGTCCT 284
Query 121 CGCCACACTGGAGTGATGGTTGGAATGGGACAGAAGGATGCATATGTTGGCGATGAAGCT 180
|| ||||| || ||||||||||| ||||| || |||||||| ||||||||||||||||||
Sbjct 285 CGTCACACCGGTGTGATGGTTGGGATGGGGCAAAAGGATGCTTATGTTGGCGATGAAGCT 344
Query 181 CAATCCAAGCGTGGTATTCTAACCCTTAAATACCCAATTGAGCACGGTATTGTCAACAAT 240
|||||||| || |||||| |||| || || ||||| |||||||| || ||||||||||||
Sbjct 345 CAATCCAAACGAGGTATTTTAACTCTCAAGTACCCTATTGAGCATGGAATTGTCAACAAT 404
Query 241 TGGGATGATATGGAAAAAATATGGCATCATACTTTCTACAATGAGCTCCGTGTTGCTCCT 300
|||||||| ||||| || || |||||||| ||||||||||||||||||||||||||||||
Sbjct 405 TGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTCCGTGTTGCTCCT 464
Query 301 GAGGAGCATCCCATTTTACTCACTGAAGCACCTCTTAACCC-AAAGGCTAACCGTGAGAA 359
||||| ||||| ||| |||| || || ||||| |||||||| |||| |||| ||||||||
Sbjct 465 GAGGAACATCCTATTCTACTTACCGAGGCACCGCTTAACCCGAAAG-CTAATCGTGAGAA 523
Query 360 GATGACTCAGATCATGTTTGAAACCTTT-AATGCTCCTGCCATGTATGTCGCCATTCAAG 418
||||||||| ||||||||||| || ||| ||||| ||||| |||||||| || ||||| |
Sbjct 524 GATGACTCAAATCATGTTTGAGAC-TTTCAATGCCCCTGCTATGTATGTGGCTATTCAGG 582
Query 419 CTGTCCTGTCACTTTATGCTAGTGGCCGTACTACGGGTATTGTGCTCGACTCTGGAGATG 478
|||| || || |||||||| ||||| |||||||| |||||||||||||||||||||||||
Sbjct 583 CTGTTCTTTCTCTTTATGCCAGTGGTCGTACTACCGGTATTGTGCTCGACTCTGGAGATG 642
Query 479 GTGTGAGTCACACGGTCCCTATCTATGAGGGTTACGCTCTTCCGCATGCCATCCTACGTC 538
||||||| ||||| || |||||||||||||| || || ||||| ||||| ||||||||||
Sbjct 643 GTGTGAGCCACACTGTTCCTATCTATGAGGGGTATGCACTTCCACATGCTATCCTACGTC 702
Query 539 TTGATCTTGCAGGTCGTGACCTGACAGATGCTCTGATGAAGATCCTCACTGAGCGTGGTT 598
|||||||||| ||||||||||| || ||||| |||||||||||||| || ||||||||||
Sbjct 703 TTGATCTTGCTGGTCGTGACCTCACGGATGCGCTGATGAAGATCCTAACCGAGCGTGGTT 762
Query 599 ACTCTTTCACCACAACAGCTGAGCGTGAAATTGTCAGAGACATCAAGGAGAAGCTTTGCT 658
||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 763 ACTCTTTCACCACCACAGCAGAGCGTGAAATTGTCAGAGACATAAAGGAGAAGCTTTGCT 822
Query 659 ACATTGCCCTTGACTACGAGCAGGAGCTTGAGACGGCTAAAACCAGCTC-TGCTGTTGAG 717
||||||| ||||||||||||||||| || ||||| || ||||||||||| | ||||||||
Sbjct 823 ACATTGCTCTTGACTACGAGCAGGAACTCGAGACAGCCAAAACCAGCTCAT-CTGTTGAG 881
Query 718 AAGAACTATGAGTTACCTGATGGGCAAGTGATCACCATTGGATCTGAGCGTTTCCGTTGC 777
|||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 882 AAGAACTACGAGCTACCTGATGGGCAAGTGATCACCATTGGATCAGAGCGATTCCGTTGT 941
Query 778 CCAGAGGTTCTTTACCAGCCATCTATGATCGGTATGGAGAATGCTGGTATCCATGAAACC 837
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 942 CCTGAGGTTCTTTACCAGCCATCTATGATTGGTATGGAGAATGCTGGTATCCATGAAACC 1001
Query 838 ACCTACAACTCCATAATGAAATGTGATGTTGACATCAGAAAGGACTTGTATGGTAACATT 897
||||| |||||||||||||| |||||||| |||||||| ||||||||||| |||||||||
Sbjct 1002 ACCTATAACTCCATAATGAAGTGTGATGTCGACATCAGGAAGGACTTGTACGGTAACATT 1061
Query 898 GTGCTCAGTGGTGGAACAACTATGTTCCCTGGAATTGCTGACAGAATGAGCAAAGAGATC 957
||||||||||||||||| || |||||||||||||| || |||||||||||||||||||||
Sbjct 1062 GTGCTCAGTGGTGGAACCACAATGTTCCCTGGAATCGCCGACAGAATGAGCAAAGAGATC 1121
Query 958 ACTGCTTTGGCACCGAGCAGCATGAAGATCAAAGTCGTTGCACCGCCGGAGAGGAAATAC 1017
||||||||||| || |||||||||||||||||||||||||| || || ||||||||||||
Sbjct 1122 ACTGCTTTGGCTCCAAGCAGCATGAAGATCAAAGTCGTTGCCCCTCCAGAGAGGAAATAC 1181
Query 1018 TCTGTCTGGATTGGAGGATCCATCTTGGCCTCCCTCAGTACCTTCCAGCAGA 1069
||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1182 TCTGTCTGGATTGGAGGGTCCATCTTGGCCTCCCTCAGTACCTTCCAGCAGA 1233
> AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837
FORWARD LENGTH=1544
Length=1544
Score = 955 bits (517), Expect = 0.0
Identities = 897/1081 (83%), Gaps = 24/1081 (2%)
Strand=Plus/Plus
Query 1 ATGGCTGATGGTGAAGACATTCAACCCCTTGTCTGTGACAACGGAACTGGAATGGTTAAG 60
||||| || ||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct 160 ATGGCGGACGGTGAAGACATTCAACCGCTTGTTTGTGACAATGGAACTGGAATGGTTAAG 219
Query 61 GCTGGTTTTGCTGGG-GATGATGCACCGAGGGCTGTGTTTCCAAGTATTGTTGGCCGTCC 119
|| || || || ||| || |||||||| || || || ||||| || ||||| ||||||||
Sbjct 220 GCCGGATTCGC-GGGTGACGATGCACCAAGAGCGGTTTTTCCGAGCATTGTAGGCCGTCC 278
Query 120 TCGCCACACTGGAGTGATGGTTGGAATGGGACAGAAGGATGCATATGTTGGCGATGAAGC 179
||||||||| || |||||||| || |||||||| |||||||| |||||||| || || ||
Sbjct 279 TCGCCACACGGGTGTGATGGTAGGGATGGGACAAAAGGATGCTTATGTTGGAGACGAGGC 338
Query 180 TCAATCCAAGCGTGGTATTC-TAACCCTTAAATACCCAATTGAGCACGGTATTGTCAACA 238
|||||| || ||||||| || | || || || |||||||||||||| || ||||| || |
Sbjct 339 TCAATCAAAACGTGGTA-TCTTGACTCTGAAGTACCCAATTGAGCATGGAATTGTTAATA 397
Query 239 ATTGGGATGATATGGAAAAAATATGGCATCATACTTTCTACAATGAGCTCCGTGTTGCTC 298
|||||||||| ||||| || || |||||||| ||||||||||||||||| |||||||| |
Sbjct 398 ATTGGGATGACATGGAGAAGATTTGGCATCACACTTTCTACAATGAGCTTCGTGTTGCCC 457
Query 299 CTGAGGAGCATCCCATTTTAC-TCACTGAAGCACCTCTTAA-CCCAAAGGCTAACCGTGA 356
|||| || ||||| || | | | || ||||| ||||| || || ||| |||||||||||
Sbjct 458 CTGAAGAACATCCGGTTCT-CTTGACCGAAGCTCCTCTCAATCCGAAA-GCTAACCGTGA 515
Query 357 GAAGATGACTCAGATCATGTTTGAAACCTTTAATGCTCCTGCCATGTATGTCGCCATTCA 416
|||||||||||||||||||||||| || || ||| ||||||| |||||||| ||||||||
Sbjct 516 GAAGATGACTCAGATCATGTTTGAGACATTCAATACTCCTGCTATGTATGTTGCCATTCA 575
Query 417 AGCTGTCCTGTCACTTTATGCTAGTGGCCGTACTACGGGTATTGTGCTCGACTCTGGAGA 476
|||||| || ||||| ||||| ||||||||||| || |||||||| | |||||||||||
Sbjct 576 AGCTGTTCTCTCACTCTATGCCAGTGGCCGTACAACTGGTATTGTTTTGGACTCTGGAGA 635
Query 477 TGGTGTGAGTCACACGGTCCCTATCTATGAGGGTTACGCTCTTCCGCATGCCATCCTACG 536
||||||||| |||||||| || ||||| |||||||||||||| || || || ||||||||
Sbjct 636 TGGTGTGAGCCACACGGTACCAATCTACGAGGGTTACGCTCTCCCACACGCAATCCTACG 695
Query 537 TCTTGATCTTGCAGGTCGTGACCTGACAGATGCTC-TGATGAAGATCCTCACTGAGCGTG 595
|||||| || |||||||||||||| || || | | | ||||| |||||||| |||||||
Sbjct 696 TCTTGACCTAGCAGGTCGTGACCTCACGGAC-CACCTCATGAAAATCCTCACAGAGCGTG 754
Query 596 GTTACTCTTTCACCACAACAGCTGAGCGTGAAATTGTCAGAGACATCAAGGAGAAGCTTT 655
| ||||| ||||||||||| ||||| ||||||||||| |||||||| || |||||||| |
Sbjct 755 GATACTCCTTCACCACAACTGCTGAACGTGAAATTGTTAGAGACATGAAAGAGAAGCTCT 814
Query 656 GCT-ACATTGCCCTTGACTACGAGCAGGAGCTTGAGACGGCTAAAACCAGCTC-TGCTGT 713
|| ||||||| || |||| |||||| ||||| ||||| | ||||| ||||| | | ||
Sbjct 815 -CTTACATTGCTCTAGACTTCGAGCAAGAGCTAGAGACTTCCAAAACAAGCTCGTCC-GT 872
Query 714 TGAGAAGAA-CTAT-GAG-TTACCTGATGGGCAAGTGATCACCATTGGATCTGAGCGTTT 770
|||||| || || | ||| || |||||||| |||||||| ||||||||| | ||| | ||
Sbjct 873 TGAGAA-AAGCT-TCGAGCTT-CCTGATGGACAAGTGATAACCATTGGAGCAGAGAGGTT 929
Query 771 CCGTTGCCCAGAGGTTCT-TTACCAGCCATCTATGATCGGTATGGAGAATGCTGGTATCC 829
||| || || || ||||| || |||||| || |||||||| ||||| ||| | || ||||
Sbjct 930 CCGGTGTCCGGAAGTTCTGTT-CCAGCCGTCAATGATCGGAATGGAAAATCCAGGAATCC 988
Query 830 ATGAAACCACCTACAACTCCATAATGAAATGTGATGTTGACATCAG-AAAGGACTTGTAT 888
|||||||||| || ||||| || |||||||||||||| || || || |||| ||||||||
Sbjct 989 ATGAAACCACATATAACTCTATCATGAAATGTGATGTGGATATTAGGAAAG-ACTTGTAT 1047
Query 889 GGTAACATTGTGCTCAGTGGTGGAACAACTATGTTCCCTGGAATTGCTGACAGAATGAGC 948
|||||||||||||| ||||||||||| || ||||| || |||| ||| |||||||||
Sbjct 1048 GGTAACATTGTGCTAAGTGGTGGAACCACAATGTTTGGAGGGATTGGTGATAGAATGAGC 1107
Query 949 AAAGAGATCACTGCTTTGGCACCGAGCAGCATGAAGATCAAAGTCGTTGCACCGCCGGAG 1008
|||||||| || |||||||| || || || |||||||| || ||||| || || ||||||
Sbjct 1108 AAAGAGATTACGGCTTTGGCTCCAAGTAGTATGAAGATTAAGGTCGTGGCTCCACCGGAG 1167
Query 1009 AGGAAATACTCTGTCTGGATTGGAGGATCCATCTTGGCCTCCCTCAGTACCTTCCAGCAG 1068
||||| ||| ||| ||||| || || || || ||||| || ||||| || |||||||||
Sbjct 1168 AGGAAGTACAGTGTATGGATCGGTGGCTCTATATTGGCTTCACTCAGCACTTTCCAGCAG 1227
Query 1069 A 1069
|
Sbjct 1228 A 1228
> AT2G42170.1 | Symbols: | Actin family protein | chr2:17577714-17580392
FORWARD LENGTH=1402
Length=1402
Score = 466 bits (252), Expect = 2e-130
Identities = 786/1038 (76%), Gaps = 60/1038 (6%)
Strand=Plus/Plus
Query 34 TGTGACAACGGAACTGGAATGGTTAAGGCTGGTTTTGCTGGGGATGATGCACCGAGGGCT 93
|||||||| |||||||||||| | ||||| || | |||||| || |||||||| || | |
Sbjct 142 TGTGACAATGGAACTGGAATGATCAAGGCAGGATATGCTGGAGAAGATGCACCAAGTGTT 201
Query 94 GTGTTTCCAAGTATTGTTGGCCGTCCTCGC-CACACTGGAGTGATGGTTGGAATGGGA-C 151
||| ||||||| | ||| || ||||| | | || || |||| |||||| ||||| | |
Sbjct 202 GTG-TTCCAAGCACTGTGGGTCGTCCAC-CACATACGGGAGGGATGGTAGGAAT-GAATG 258
Query 152 AGAAGGATGCATATGTTGGCGATGAAGCTCAATCCAAGCGTGGTATTCTAACCCTTAAAT 211
|||| ||| || ||| || || || ||| || ||| | | ||||| || || ||| | |
Sbjct 259 AGAACGATTTATTTGTGGGAGACGACGCTGAAGCCAGGAGCGGTATACTTACACTTGACT 318
Query 212 ACCCAATTGAGCACGGTATTGTCAACAATTGGGATGATATGGAAAAAATATGGCATCATA 271
||||||| ||||||||| |||| | |||||||||||| ||||| || || ||| | ||||
Sbjct 319 ACCCAATGGAGCACGGTGTTGTTAGCAATTGGGATGACATGGAGAAGATTTGGTACCATA 378
Query 272 C-TTTCTACAATGAGCTCCGTGTTGCTCCTGAGGAGCATCCCAT-T--TTACTCACTGAA 327
| ||| |||| |||||| ||||| |||||||| || || ||| | | || |||||||||
Sbjct 379 CGTTT-TACAGTGAGCTACGTGTGGCTCCTGAAGAACA-CCC-TGTGCTT-CTCACTGAA 434
Query 328 GCACCTCTTAACCC-AAAGGCTAACCGTGAGAAGATGACTCAGATCATGTTTGAAACCTT 386
|| ||||||||||| ||| || | ||||||||||||||||||||||||||||| || ||
Sbjct 435 GCTCCTCTTAACCCGAAA-GCCGATCGTGAGAAGATGACTCAGATCATGTTTGAGACATT 493
Query 387 TAATGCTCCT-GCCATGTATGTCGCCATTCAAGCTG-TCCTGTCACTTTATGCTAGTGGC 444
| || |||| | |||||| | | || || || | || | || || |||| |||||
Sbjct 494 TGCTGTTCCTAGT-ATGTATATTGGTATGCAGGCCGCTC-TCTCCCTCCATGCCAGTGGT 551
Query 445 CGTACTACGGGTATTGTGCTCGACTCTGGAGATGGTGTGAG-TCACACGGTCCCTATCTA 503
||||| || |||| |||| | || || |||||||||||||| | ||| || || |||||
Sbjct 552 CGTACCACAGGTACTGTGTTGGATTCAGGAGATGGTGTGAGCT-ACATAGTTCCAATCTA 610
Query 504 TGAGGGTT-ACGCTCTTCCGCATGCCATCCTACGTCTTGATCTT-GCAGGTCGTGACCTG 561
|| |||| | || || || ||||| ||| | || || ||| || ||||| ||| ||||
Sbjct 611 CGAAGGTTCA-GCACTCCCACATGCAATCTTGCGGCTAGAT-TTAGCAGGCCGTCACCTA 668
Query 562 AC-AGA-TGCTCTGATGAAGATCCTCACTG-AGCGTGGTTACTCTTTCACCACAACAGCT 618
|| | | | | || ||||| ||| | | || | ||||| || || ||| | ||
Sbjct 669 ACCA-ACTAC-CTCATGAAAATCATGA-TGGAACGTGG---CT-----AC-ACATCCGCC 716
Query 619 GAGCGTGAAATTGTCAGAGACATCAAGGAG-AAGCTTTGCT-ACATTGCCCTTGACTACG 676
|||||||| | ||| |||||||||| || || |||| | |||| || ||||||||||
Sbjct 717 GAGCGTGAGGTAGTCCGAGACATCAAAGAACAA--TTTGGTTACATAGCTCTTGACTACG 774
Query 677 AGCAGGAGCTTGAGACGGCTA-AAACCAGCTCTGCTGTTGAGAAGAAC-TATGAG-TTAC 733
|||| || | |||| ||||| ||| || || || | || | |||| || ||| || |
Sbjct 775 AGCAAGAAATGGAGAAGGCTACAAAG-AGTTCGGCAATCGATA-GAACCTACGAGCTT-C 831
Query 734 CTGATGGGCAAGTGATCACCATTGGATCTGAGCGTTTCCGTTGCCCAGAGGTTCTTTACC 793
| ||||| ||||||||||| || ||| ||||| | ||| | ||||| |||||||||| ||
Sbjct 832 CAGATGGTCAAGTGATCACGATAGGAGCTGAGAGATTCAGGTGCCCTGAGGTTCTTTTCC 891
Query 794 AGCCATCTATGATCGGTATGGAGAA-TGCTGGTATCCATGA-AACCACCTACAACTCCAT 851
|||| ||| |||| || ||||| || | ||||||| ||||| || || ||||| || ||
Sbjct 892 AGCCGTCTTTGATTGGAATGGA-AACTTCTGGTATTCATGAGAAG-ACTTACAATTCAAT 949
Query 852 AATGAAATGTGATGTTGACATCAGAAAGGACTTGTATGGTAACATTGTGCTCAGTGGTGG 911
||||| ||||||| ||| || || ||||| |||||||| ||||||||| | ||||||||
Sbjct 950 CATGAAGTGTGATGATGATATAAGGAAGGATTTGTATGGAAACATTGTGTTGAGTGGTGG 1009
Query 912 AACAACTATGTTCCCTGGAATTGCTGACAGAATGAGCAAAGAGATCACTGCT-TTGGCA- 969
|| || ||||||| || |||| || || |||| ||||||||||| ||| ||| ||
Sbjct 1010 GACGACGATGTTCCGAGGGATTGAAGAGAGGATGACCAAAGAGATCAATGCGCTTG-CAG 1068
Query 970 CCGAGCAGCATGAAGATCAAAGTCGTTGCACCGCCGGAGAGGAAATACTC-TGTCTGGAT 1028
||| | |||| ||| ||| | ||||| || ||||| |||||||| | ||| |||||
Sbjct 1069 CCGCTAAT-ATGAGGATTAAAATTGTTGCTCCCCCGGAAAGGAAATA-TAGTGTTTGGAT 1126
Query 1029 TGGAGGATCCATCTTGGC 1046
|||||| ||||| |||||
Sbjct 1127 TGGAGGCTCCATTTTGGC 1144
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63152285610
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5