BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg323928 Length=888 Score E Sequences producing significant alignments: (Bits) Value AT3G53900.2 | Symbols: UPP, PYRR | uracil phosphoribosyltransfe... 1426 0.0 > AT3G53900.2 | Symbols: UPP, PYRR | uracil phosphoribosyltransferase | chr3:19956656-19959041 REVERSE LENGTH=1184 Length=1184 Score = 1426 bits (772), Expect = 0.0 Identities = 852/891 (96%), Gaps = 3/891 (0%) Strand=Plus/Plus Query 1 ATGGAGTGCTCAATTGGTAACACTTTCAGGTGTTCTTCTGATACGCTGCGTTTTGGTCCC 60 |||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 36 ATGGCGTGCTCAATTGGTAACGCTTTCAGGTGTTCTTCTGATACGCTGCGTTTTGCTCCC 95 Query 61 CGACAACAAT---GCAGCCGCCTAAACCCTAATCCTTCCTCTTTCCTCTCCTTTAATTCC 117 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 96 CGACAACAATGCAGCAGCCGCCTAAACCCTAATCCTTCCTCTTTCCTCTCCTTTAATTCC 155 Query 118 TCCCCAATTCTCGCACAGAATTTGAGTGCTTCTTCTTCGTCTGTTTCCCGGCGGACTATT 177 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct 156 TCCCCAATTCTCGCACAGAATTTGGGTGCTTCTTCTTCGTCACTTTCCCGACGGACTATA 215 Query 178 CGAGTTAGAGCAAAAATGGCGGCGTCAGAGGGTTCGATTAACGGAAGCAATAGGATGCTG 237 |||| |||| |||||||||| ||||| |||| ||| |||||||| ||||| ||||||||| Sbjct 216 CGAGCTAGAACAAAAATGGCTGCGTCGGAGGCTTCCATTAACGGGAGCAACAGGATGCTG 275 Query 238 GTGTTTGTGCCACCACATCCTTTGATCAAACACTGGATCTCTGTTCTCAGAAATGACCAA 297 || |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 276 GTCTTTGTGCCACCACATCCTTTGATCAAACACTGGATCTCTGTTCTGAGAAATGAACAA 335 Query 298 ACTCCTTGTCCTATTTTCAGGAATGCAATAGCTGAACTAGGGAGACTACTCATGTATGAA 357 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 336 ACTCCTTGTCCTGTTTTCAGGAATGCAATAGCTGAACTAGGGAGATTACTCATGTATGAA 395 Query 358 GCAGCACGAGAGTGGCTGCCAACTGTTGTGGGAGAAATAATGTCTCCTATGGGTCCTGCT 417 ||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 396 GCATCACGAGAGTGGCTGCCAACTGTTGTGGGTGAAATAATGTCTCCAATGGGTCCTGCT 455 Query 418 TCTGTTGAATTCATTGATCCTAGAGAGCCTATAGCGGTTGTTCCGATTTTAAGAGCTGGT 477 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 456 TCTGTTGAATTCATTGATCCTAGAGAGCCTATTGCGGTTGTTCCGATATTAAGAGCTGGT 515 Query 478 CTTGCTCTTGCGGAACACGCATCCTCAGTTTTGCCTGCAAATAAAATTTATCATTTAGGA 537 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 516 CTTGCTCTTGCGGAACACGCATCCTCAGTTTTACCTGCTAATAAAATTTATCATTTAGGA 575 Query 538 GTAAGTAGGGATGAGAAAACACTTTTGCCGTCGGTGTATCTTAACAAGTTGCCTGATGAA 597 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 576 GTAAGTAGAGATGAGAAAACACTTTTACCATCGGTGTATCTTAACAAGTTGCCTGATGAA 635 Query 598 TTTCCCAAGAATTCAAGAGTATTTTTGGTCGATCCAGTGCTTGCCACAGGTGGTACCATA 657 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 636 TTTCCCAAGAATTCAAGAGTATTTTTGGTCGACCCAGTGCTTGCCACAGGTGGTACCATA 695 Query 658 ATGGCGGCGATGGATCTATTGAAGGAACGTGGTTTGTCTGTGCAGCAAATCAAAGTGATT 717 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 696 ATGGCGGCGATGGATCTATTGAAGGAACGTGGTTTGTCTGTTCAGCAAATCAAAGTGATT 755 Query 718 TGTGCGATTGCTGCACCTCCTGCACTATCGAAGCTGAATGAGAAATTCCCCGGGCTTCAT 777 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 756 TGTGCGATTGCTGCACCTCCTGCACTATCGAAGCTTAACGAGAAATTCCCCGGGCTTCAT 815 Query 778 GTATATGCTGGAATTATCGATCCTGAAGTCAATGAAAAGGGGTACATAATCCCTGGGCTT 837 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 816 GTATATGCTGGAATTATTGATCCTGAAGTCAATGAAAAGGGGTACATAATCCCTGGGCTT 875 Query 838 GGAGACGCTGGAGACCGCAGTTTCGGGACAGAAACACATTGGGTGAAGTGA 888 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 876 GGAGACGCTGGAGACCGCAGTTTCGGGACAGAAACACATTGGGTGAAGTGA 926 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43352068861 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5