BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg323930
Length=2136
Score E
Sequences producing significant alignments: (Bits) Value
AT3G53930.2 | Symbols: | Protein kinase superfamily protein | ... 3465 0.0
AT2G37840.1 | Symbols: | Protein kinase superfamily protein | ... 1517 0.0
> AT3G53930.2 | Symbols: | Protein kinase superfamily protein
| chr3:19966352-19970813 FORWARD LENGTH=2561
Length=2561
Score = 3465 bits (1876), Expect = 0.0
Identities = 2053/2140 (96%), Gaps = 5/2140 (0%)
Strand=Plus/Plus
Query 1 ATGGCTCAGTCGTCG-T--TGGCGGCGGCGGGGGGAAGCGGAAGGGTTATCGGCGATTAC 57
||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||
Sbjct 190 ATGGCTCAGTCGTCGTTGGTGGCGGCGGCGGGGAGAAGCGGAAGGGTTATCGGCGATTAT 249
Query 58 GCCGTGGGTCGACAAATCGGGTCGGGTTCGTTCTCGGTTGTTTGGGAAGGGAGGCATCTT 117
|| ||||||||||||||||||||||| ||||| || || |||||||||||||||||||||
Sbjct 250 GCGGTGGGTCGACAAATCGGGTCGGGGTCGTTTTCCGTGGTTTGGGAAGGGAGGCATCTT 309
Query 118 GTTCATGGCACCGTCGTTGCTATCAAGGAGATCGCTATGGCTCGACTTAATAAGAAGTTG 177
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 310 GTTCATGGCACCGTCGTTGCTATCAAGGAGATCGCTATGGCTCGGCTTAATAAGAAGTTG 369
Query 178 CAAGAGAGTCTCATGTCGGAGATTATCATCTTAAGGAAGATTAATCATCCTAACATCATT 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 370 CAAGAGAGTCTCATGTCGGAGATTATCATCTTAAGGAAGATTAATCATCCTAACATCATT 429
Query 238 CGCTTTATCGACATGATCGAGGCTCCTGGGAAGATAAATTTGGTGTTGGAGTACTGCAAA 297
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 430 CGCTTTATCGACATGATCGAGGCTCCCGGGAAGATAAATTTGGTGTTGGAGTACTGTAAA 489
Query 298 GGGGGTGATCTGTCTATGTATATTCATAGTCATGGAAGTGTTCCTGAAGCTACTGCTAAG 357
|| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 490 GGTGGTGATCTGTCTATGTATATTCACAAACATGGAAGTGTTCCTGAAGCTACTGCTAAG 549
Query 358 CATTTTATGCAGCAGTTAGCGGCTGGCTTACAAGTTCTTCGTGAGAATAATATTATTCAC 417
|||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 550 CATTTTATGCTGCAGTTAGCGGCTGGCTTACAAGTTCTTCGTGACAATAATATCATTCAC 609
Query 418 CGCGATTTAAAGCCTCAGAATCTTCTTCTATCCACAGATGATAATGATGCAGCTCTGAAG 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 CGCGATTTAAAGCCTCAGAATCTTCTTCTATCCACAGATGATAATGATGCAGCTCTGAAG 669
Query 478 ATTGCCGATTTTGGATTTGCAAGATCGTTGCAGCCTAGGGGTTTGGCAGAAACTTTATGT 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 670 ATTGCCGATTTTGGATTTGCAAGATCGTTGCAGCCTAGGGGTTTGGCAGAAACTTTATGT 729
Query 538 GGTTCACCACTGTATATGGCCCCAGAGATTATGCAGCTCCAAAAATATGATGCAAAGGCA 597
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 730 GGTTCACCACTGTATATGGCCCCAGAGATTATGCAGCTTCAAAAATATGATGCAAAGGCA 789
Query 598 GATCTCTGGAGTGTTGGTGCTATATTATTTCAACTTGTGACAGGCAGAACCCCTTTTACA 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 790 GATCTCTGGAGTGTTGGTGCTATATTATTTCAACTTGTGACAGGCAGAACCCCTTTTACA 849
Query 658 GGAAACAGCCAAATTCAGTTGCTCCAGAACATAATAAGATCAACTGAATTACATTTTCCA 717
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 850 GGAAACAGCCAAATTCAGTTGCTCCAGAACATTATAAGATCAACTGAATTACATTTTCCA 909
Query 718 GCCGACTGTAGAGATTTGAGTACCAATTGTAGAGATCTATGCCAGAAGCTACTGCGTCGT 777
|| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct 910 GCAGACTGTAGAGATTTGAGTACCGACTGTAAAGATCTATGCCAGAAGCTACTGCGTCGT 969
Query 778 AATCCAGTGGAACGTTTGACGTTTGAAGAGTTTTTTCATCATCCTTTTCTTTCAGACAAA 837
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 970 AATCCAGTGGAACGTTTGACGTTTGAAGAGTTTTTTCATCATCCTTTCCTTTCAGACAAA 1029
Query 838 CAATCATATGATTTCACAAGGAGTAGATTAGATTCACGAACGATGAGCGATTTTCATTCA 897
||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1030 CAATCATATGATTTCACAAGGAGTAGATTAGATTCACGAACTATGAACGATTTTCATTCA 1089
Query 898 TCTGGAAGCAGTCCCTCAAGAAATATGGAAGAAATGTCTCAAGAAGACTGTTTGCCAttt 957
|| ||||||||||||||||||||||| |||||||| |||||||||||| | ||||| ||
Sbjct 1090 TCAGGAAGCAGTCCCTCAAGAAATATAGAAGAAATTTCTCAAGAAGACGGGTTGCCGTTC 1149
Query 958 tttttAGATGATGATTCTAGTGGACCTGAGGGAAGCCCTTCATATTTTAAACATACTTCC 1017
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1150 TTTTTAGATGATGATTCTAGTGGACCTGAGGGAAGCCCTTCATCTTTTAAACATACTTCC 1209
Query 1018 CCAATAAAGTCATCTTACGGATTTAACGTTGAAAGAAGAGAGGCAGCTTCTA-GTCCTTT 1076
|| || ||||||||||||||||||| ||||||||||| |||||||| | || |||||||
Sbjct 1210 CCGATGAAGTCATCTTACGGATTTAGTGTTGAAAGAAGGGAGGCAGCAT-TAAGTCCTTT 1268
Query 1077 GAAAAACATGGAACTTACTTCCGGATATAGTAGAGTCAGTCATAGAGCAGAAACCAATAA 1136
|||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1269 GAAAAACATGGATCTTTCTTCCAGATATAGTAGAGTCAGTCATAGAGCAGAAACCAATAA 1328
Query 1137 TTCCAAGTTGGAAGGCCATAGATTATCAGATAGAAACCAATTCAAACCGTCAAGCTTGCC 1196
|| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 1329 TTTCAAGTTTGAGGGCCATAGATTATCAGATAGAAGCCAATTCAAACCGTCAAGCTTACC 1388
Query 1197 GGATTCCAGATCACTTAGTACTCAAGGAAGAGTAGGGGATTCTCCAGACTCAATGGATCA 1256
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1389 TGATTCCAGATCATTTAGTACCCAAGGAAGAGTAGGGGATTCTCCAGACTCAATGGATCA 1448
Query 1257 AGACTATGTTCTGATATCTGGACCACCGGTTGATATACCATCATCTTCATTTGGTTCTCC 1316
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1449 AGATTATGTTCTGATATCTGGACCACCGGTTGATATACCATCATCTTCATCTGGTTCTCC 1508
Query 1317 GAAGCCTTTCAATTACCCATTCAAATCACATTCTCCTCCTGTAGAGTTCAGCAAGAGAAA 1376
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1509 GAAGCCTTTCAATTACCCATTCAAATCACATTCTCCTCCTGTAGAGTTCATCAAGAGAAA 1568
Query 1377 TGTAACTACTTTAACGGCTCCTATGCAAATAGCTGGTGCCACTGGCAACAACATTAGTCG 1436
|||||||| ||||||||||||||||| ||||||| |||| |||||||||||| |||||||
Sbjct 1569 TGTAACTAATTTAACGGCTCCTATGCCAATAGCTAGTGCTACTGGCAACAACCTTAGTCG 1628
Query 1437 ATTTGGAAGCTTGGAGAGTCAGAATTATATCCCGGGTACTTCTCATGGGTCTCTAGATCT 1496
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||
Sbjct 1629 ATTTGGAAGCTTGGAGAGTCAGAATTGTATCCCGGGTACTTCCCATGGGTCTCTGGATCT 1688
Query 1497 TGTGGATGCTTTTGAACAGCCATCAACTAACAGCTTGACAAGAATTCGGTCTTTGCAAAA 1556
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1689 TGTAGATGCTTTTGAACAGCCATCAACTAACAGCTTGACAAGAATCCGGTCTTTGCAAAA 1748
Query 1557 GTGTGCAGCAGCAATAGCAGAATTGGTTCATGAAAGAGGTGAAAATGGTAAGCATTTAGA 1616
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1749 GTGTGCAGCTGCAATAGCAGAATTGGTTCATGAAAGGGGTGAAAATGGTAAGCATTTAGA 1808
Query 1617 AGCTTTCTCGATCCAACTGGTGATTCTTGCAATTTGGAATCAAGCACTGCACATCTGTCA 1676
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1809 AGCTTTCTCGATCCAACTGGTGATTCTTGCAATTTGGAATCAAGCACTACACATCTGTCA 1868
Query 1677 TACTCAGGCAGTCTCGGGTATAGAAGGAAGCCTGCGCCAAGACATTAACAGAGTAAGAAG 1736
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 1869 TACTCAGGCAGTCTCGGGTATAGAAGGAAGCCTGCTCCAAGACATTAACAGAGTAGGAAG 1928
Query 1737 AAATATCAGCCACGAAGGATCAGAGAAGTTATTGTCTCAGATTCAGAAAGAATTTGTCCA 1796
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1929 AAATATCAGCCACGGAGGATCAGAGAAGTTATTGCCTCAGATTCAGAAAGAATTTGTCCA 1988
Query 1797 GGAAGTTGAGCGTGCTGAAGAACTTGCCAAGTTTGTTGAATCTGATAATACAAAGATGCC 1856
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1989 GGAAGTGGAGCGTGCTGAAGAACTTGCCAAGTTTGTTGAATCTGATAATGCAAAGATGCC 2048
Query 1857 GGATGCAATGGAGATAATACTTCAAGCAGCTCTTGCTCTTGGCATAAGTGGAGGAGTAGA 1916
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2049 GGATGCAATGGAGATGATACTTCAAGCAGCTCTTGCTCTTGGCATAAGTGGAGGAGTAGA 2108
Query 1917 TGAAGTGATGGGAGACGCAGAGAACGCAGGAAACCTCTACTCAAAAGCGGTGCGTTTGCT 1976
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2109 TGAAGTGATGGGAGACGCAGAGAACGCAGGAAACCTCTACTCAAAAGCGGTGCGTTTGTT 2168
Query 1977 AGTCTTCCTTGTAGTGGAGGCACAGACGCTGATTCTCAATCCACCTTTAACACTCACAAA 2036
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2169 AGTCTTCCTTGCAGTGGAGGCGCAGACGCTGATTCTCAATCCACCTTTAACACTCACAAA 2228
Query 2037 CTCAGTAAGGTATCGACTCAGAACATATATTGATTCCCTCATAGCCAGATTAAAACATCT 2096
||||||||||||||||||||||||||||||||| || |||||| ||||||| ||||||||
Sbjct 2229 CTCAGTAAGGTATCGACTCAGAACATATATTGACTCACTCATAACCAGATTGAAACATCT 2288
Query 2097 TCAATCACATAGAAGAACTTCATATCCTCAGAAGCAATGA 2136
|||||||||||||||||||||||||||||||||||||||
Sbjct 2289 GCAATCACATAGAAGAACTTCATATCCTCAGAAGCAATGA 2328
> AT2G37840.1 | Symbols: | Protein kinase superfamily protein
| chr2:15851803-15856301 FORWARD LENGTH=2631
Length=2631
Score = 1517 bits (821), Expect = 0.0
Identities = 1429/1716 (83%), Gaps = 68/1716 (4%)
Strand=Plus/Plus
Query 61 GTGGGTCGACAAATCGGGTCGGGTTCGTTCTCGGTTGTTTGGGAAGGGAGGCATCTTGTT 120
|||||||| ||||||||||||||||||||||| ||||||||||||| |||||| | |||
Sbjct 215 GTGGGTCGTCAAATCGGGTCGGGTTCGTTCTCTGTTGTTTGGGAAGCGAGGCACCGCGTT 274
Query 121 CATGGCACCGTCGTTGCTATCAAGGAGATCGCTATGGCTC-GACTTAATAAGAAGTTGCA 179
| || || | ||||||||||| |||||||| |||| | | ||||| |||||| ||||
Sbjct 275 GACGGTACTGAGGTTGCTATCAAAGAGATCGCCATGG-ACAGGCTTAACAAGAAGCTGCA 333
Query 180 AGAGAGTCTCATGTCGGAGATTATCATCTTAAGGAAGATTAATCATCCTAACATCATTCG 239
|| ||||||||||| |||||| | ||||| |||| ||| ||||||||||||||||| ||
Sbjct 334 GGAAAGTCTCATGTCTGAGATTTTTATCTTGAGGAGGATCAATCATCCTAACATCATCCG 393
Query 240 CT-TTATCGACATGATCGAGGCTCCTGGG-AAGATAAATTTGGTGTTGGAGTACTGCAAA 297
| | |||||||||||| || |||||||| ||| || |||||||||||||||||||||||
Sbjct 394 -TCTGATCGACATGATCAAGTCTCCTGGGAAAG-TACATTTGGTGTTGGAGTACTGCAAA 451
Query 298 GGGGGTGATC-TGTCTATGTATATTCATAGTCATGGAAGTGTTCCTGAAGCTACTGCTAA 356
|| ||||| | ||||| ||||| | || || ||||| | ||| |||||||||||||||||
Sbjct 452 GGAGGTGA-CTTGTCTGTGTATGTCCAAAGACATGGGATTGTCCCTGAAGCTACTGCTAA 510
Query 357 GCATTTTATGCAGCAGTTAGCGGCTGGCTTACAAGTTCTTCGTGAGAATAATATTATTCA 416
|||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 511 GCATTTCATGCAGCAGTTAGCGGCCGGCTTACAAGTTCTTCGTGACAATAATATTATTCA 570
Query 417 CCGCGATTTAAAGCCTCAGAATCTTCTTCTATCCACAGATGATAATGATGCAGCTCTGAA 476
||| ||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||
Sbjct 571 CCGAGATTTAAAGCCTCAGAATCTTCTTCTATCCACAAATGAAAATGATGCAGATCTGAA 630
Query 477 GATTGCCGATTTTGGATTTGCAAGATCGTTGCAGCCTAGGGGTTTGGCAGAAACTTTATG 536
|||||| |||||||||||||||||||||||||| |||||||| | ||||| ||||||||
Sbjct 631 GATTGCTGATTTTGGATTTGCAAGATCGTTGCAACCTAGGGGGCTCGCAGAGACTTTATG 690
Query 537 TGGTTCACCACTGTATATGGCCCCAGAGATTATGCAGCTCCAAAAATATGATGCAAAGGC 596
|||||||||| ||||||||||||||||||| ||||| ||||| || ||||||||||||||
Sbjct 691 TGGTTCACCATTGTATATGGCCCCAGAGATCATGCAACTCCAGAAGTATGATGCAAAGGC 750
Query 597 AGATCTCTGGAGTGTTGGTGCTATATTATTTCAACTTGTGACAGGCAGAACCCCTTTTAC 656
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 751 AGATCTCTGGAGTGTTGGTGCTATTTTATTTCAACTTGTGACAGGCAGAACCCCTTTTAC 810
Query 657 AGGAAACAGCCAAATTCAGTTGCTCCAGAACATAATAAGATCAACTGAATTACATTTTCC 716
||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct 811 AGGAAACAGCCAAATTCAGTTGCTCCAAAACATTATAAGATCAACCGAATTACATTTTCC 870
Query 717 AGCCGACTGTAGAGATTTGAG-TACCAATTGTAGAGATCTATGCCAGAAGCTACTGCGTC 775
|| |||||||||||||| || | | | | | ||| || || |||||| ||||||| |
Sbjct 871 AGGGGACTGTAGAGATTTAAGCTTGGACT-GCATAGACCTGTGTCAGAAGTTACTGCGCC 929
Query 776 GTAATCCAGTGGAACGTTTGACGTTTGAAGAGTTTTTTCATCATCCTTTTCTTTCAGACA 835
|||||||||||||||||||||| ||||||||||| ||| |||| ||||| ||||| ||||
Sbjct 930 GTAATCCAGTGGAACGTTTGACATTTGAAGAGTTCTTTAATCACCCTTTCCTTTCGGACA 989
Query 836 AACAATCATATGATTTCACAAGGAGTAGATTAGA-TTCACGAACGATG-AGCGATTTTCA 893
|| |||||||||||| | ||||||||||| | || | |||| ||| | || |||||
Sbjct 990 GGCAGTCATATGATTTCTCCAGGAGTAGATTGGGGTTAA-GAACAATGGA-CGGTTTTCT 1047
Query 894 TTCATCTGGAAGCAGTCCCTCAAGAAATATGGAAGAAATGT-CTCAAGAAGACTGTTTGC 952
||| ||||||||||||||||| ||||| |||||||||| || ||||||||||||||||||
Sbjct 1048 TTCGTCTGGAAGCAGTCCCTCGAGAAACATGGAAGAAA-GTTCTCAAGAAGACTGTTTGC 1106
Query 953 CAttttttttAGATGATGATTCTAGTGGACCTGAGGGAAGCCCTTCATATTTTAAACATA 1012
| || || |||||||||||||||||||||||||||| |||||||||||||| ||| | |
Sbjct 1107 CGTTCCTTCTAGATGATGATTCTAGTGGACCTGAGGGGAGCCCTTCATATTTAAAAAAGA 1166
Query 1013 CTTCCCCAATAAAGTCATCTTAC-GGATTTAACGTTGA-A--AGAA--GAGAGGCAGC-- 1064
| ||| |||| ||||| || | | ||| |||| || || | |||| |||||| ||
Sbjct 1167 CATCCTCAATGAAGTCGTCCT-CTGGAATTAAAGTCGATACGAGAATTGAGAGGAAGGAG 1225
Query 1065 -T----TCTAGTCCTTTGAAA-A-ACATGGAACTTACTTCCGGATATAGTAGAGTCAGTC 1117
| ||||||||||| ||| | ||| | |||||||||| ||||||||||| ||| |
Sbjct 1226 GTGGAATCTAGTCCTTTAAAACATACA-G-AACTTACTTCTGGATATAGTAGTTTCAACC 1283
Query 1118 ATAGAGCAGAAACCAATA-ATTCCA-AGTTGGAAGGCCA-TAGATTATCAGATAG-A-AA 1172
| | || |||| | ||| ||| | | ||| || | | || ||| ||||||| | ||
Sbjct 1284 AAAAAGTGGAAAACGATAGATTT-AGATTTGAAACTCAAATAAATT--CAGATAGGAGAA 1340
Query 1173 -CCA-ATTCAAACCGTCAAGCTTGCCGGATTCCAGATCACTTAGTACTCAAGGAAGAGTA 1230
|| | || ||| || | ||| | ||||| |||||||||| | ||| ||||||||||
Sbjct 1341 ACCGCAGGGAA-CCGACAGGATTGACTGATTCTAGATCACTTATTGCTCCAGGAAGAGTA 1399
Query 1231 GGGGATTCTCCAGACTCAATGGATCAAGACTAT-GTTCT-GATATCTGGACCACCGGTTG 1288
| ||||||| |||||| ||||||||||||| | ||||| | ||||||||||||| || |
Sbjct 1400 GATGATTCTCAAGACTCCATGGATCAAGACT-TCGTTCTCG-TATCTGGACCACCAGTAG 1457
Query 1289 ATATACCATCATCTTCATTTGGTTCTCCGAAGCCTT-TCAATTACCCATTCAAATCACAT 1347
|||| ||||||||||||| ||||| ||||||||| | |||| |||||||| || ||
Sbjct 1458 ATATGCCATCATCTTCATCAAGTTCTTCGAAGCCTTAT-AATTTTCCATTCAAGTCTCAG 1516
Query 1348 TCTCCTCCTGTAGAGTTCAG-CAAGAGAAATGTAACTACTTTAACGGCTCCTATGCAAAT 1406
||||||||||||||||| | ||| |||| ||| | | ||||||||| |||| |||
Sbjct 1517 TCTCCTCCTGTAGAGTT-ATTCAACAGAAGCATAAGTTC---AACGGCTCCCATGCCAAT 1572
Query 1407 AGCTGGTGCCACTGGCAACAACATTAGTC-GATTTGGAAGC-TTGGAGAGTCAGAATTAT 1464
| |||||| ||| |||||| |||| ||| | ||||| ||| ||| | |||||| ||| |
Sbjct 1573 AATTGGTGCTACTAGCAACAGCATTGGTCAG-TTTGGGAGCCTTG-ACAGTCAGTATTCT 1630
Query 1465 ATCCCGGGTACTTCTCATGGGTCTCTAGATCTTG-TGGATGCTTTTGAACAGCCATCAAC 1523
|||| | ||||||||||||||||| ||||||| || ||||||||||||||||||||||
Sbjct 1631 GCCCCGAGCACTTCTCATGGGTCTCTGGATCTTGGTG-ATGCTTTTGAACAGCCATCAAC 1689
Query 1524 TAACAGCTTGACAAGAATTC-GGTCTTTGC-AAAAGTGTGCAGCAGCAATAGCAGAATTG 1581
| ||||| |||||||||| | ||||| || |||| | ||||||| |||| |||||| |
Sbjct 1690 TCACAGCCTGACAAGAAT-CAGGTCTCTGAGAAAA-TATGCAGCAACAATTGCAGAACTA 1747
Query 1582 GTTCATGAAAGAGGT-GAAAATGGTAAGCATTTAGAAGCTTTCTCGATCCAACTGGTGAT 1640
||| ||||||| | | ||| || || ||| |||||||||||||||||||| ||| |||
Sbjct 1748 GTTTATGAAAG-GATTGAATCTGACAAACATCTAGAAGCTTTCTCGATCCAATTGGCGAT 1806
Query 1641 TCTTGCAATTTGGAATCAAGCACTGCACATCTGTCATACTCAGGCAGTCTCGGGTATAGA 1700
||| ||||||||||| || ||||||||||| ||||||||||||||| | || ||| | ||
Sbjct 1807 TCTGGCAATTTGGAAACAGGCACTGCACATATGTCATACTCAGGCAATTTCAGGTTTGGA 1866
Query 1701 AGGAAGCCTGCGCCAAGACATTAACAGAGTAAGAAG 1736
|||||||| ||||||||||||||| | |||||||
Sbjct 1867 AGGAAGCCCAAGCCAAGACATTAACAAACTAAGAAG 1902
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105923149950
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5