BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg324005 Length=1311 Score E Sequences producing significant alignments: (Bits) Value AT3G54740.2 | Symbols: | Protein of unknown function, DUF593 |... 2078 0.0 > AT3G54740.2 | Symbols: | Protein of unknown function, DUF593 | chr3:20262391-20264601 FORWARD LENGTH=1894 Length=1894 Score = 2078 bits (1125), Expect = 0.0 Identities = 1255/1318 (95%), Gaps = 8/1318 (1%) Strand=Plus/Plus Query 1 ATGGATTCAGAATTGAGATTTCCTTCAAGGGATGTTGTGAATTGCTGTGAATTTGGTTGT 60 ||||||||||||||||| ||| |||| |||||||| |||||||||||||||| ||||||| Sbjct 443 ATGGATTCAGAATTGAGTTTTTCTTCGAGGGATGTGGTGAATTGCTGTGAATATGGTTGT 502 Query 61 GATTATTCACTTGGGGCATGTTCTTCAGATCCTTGGGCTAGGACGGTGAAAAGAAAGTTC 120 |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 503 GATTATTCTCTTGGGGCATGTTCTTCAGATCCTTTGGCTAGGACGGTGAAAAGAAAGTTC 562 Query 121 AACGAATTCAAAGAAGGG---AACATGATGTTGTTACGAGGTTCTTCTGATTCA---TCT 174 |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 563 AACGAATTCAAAGAAGGGAACAACATGATGTTGTTACGAGGTTCTTCTGATTCATCTTCT 622 Query 175 TCAAACGCTAAGATACTAGTTGAGAATGAATGCGCAGCTTTACTTGAGGCTCTTTCTAGC 234 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 623 TCAAACGCTAAGATACTAGTTGAGAATGAATGTGCAGCTTTACTTGAGGCTCTTTCTAGC 682 Query 235 CAAAGGAAAACAGTTAAAGATCTTCATTTAGAGCTTGAAGAGGAGAGAAATGCTGCTGCA 294 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 683 CAAAGGGAAACAGTTAAAGATCTTCATTTAGAGCTTGAAGAGGAGAGAAACGCTGCTGCA 742 Query 295 TCTGCAGCGAATGAGACTATGTCGATGATACTGAGGTTGCAGAGAGAAAAGGCTGAGATT 354 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 743 TCTGCAGCTAATGAGACTATGTCGATGATACTGAGGTTGCAGAGAGAAAAGGCTGAGATT 802 Query 355 CAGATGGAAGCTCGGCAATTCAAAGTGTTTGCTGAGGAGAAAATGACGCATGACCAAGAA 414 |||||||||||||||||||||||| |||||||| | ||||||||||| |||||||||||| Sbjct 803 CAGATGGAAGCTCGGCAATTCAAAATGTTTGCTCAAGAGAAAATGACACATGACCAAGAA 862 Query 415 AAGCTCTCGGTTTTGGAGAATTTGTTGTATGAGAAAGAACAAGCTATTGAGGCCTTGACT 474 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 863 AAGCTCTCGGTTTTGGAGAATTTGTTGTATGAGAAAGAACAAGCTATCGAGGCATTGACT 922 Query 475 TATGAGGTCGAAGCATACAAGCATAGATTGTTGAGCTATGGAGTCTCTGAAGCTGAGATA 534 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 923 TATGAGGTCGAAGCATACAAGCATAGATTGTTGAGCTATGGGGTATCTGAAGCTGAGATA 982 Query 535 CATGATCAGATACTTGGTTTTGGCAGAGACTCGAGCACGGTTGGTTTTGATGTTTACCCG 594 |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 983 CATGATCAGATACTTGGTTTTGGCAGAGACTCTAGCACGGTTGGCTTTGATGTTTACCCT 1042 Query 595 TGCGAGTATACTTCTTTGCAATGTAGTGTGGATGAGAACCCGTGTGAACCAGATGGTAA- 653 |||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| Sbjct 1043 TGCGAGTATACTTCTTTGGAATGTAGTGTGGATGAGAACCCGAGTGGACCAGATGGTAAC 1102 Query 654 TGTTGATATTGAAGAAAAGGTGATAGTTGGTCAGTCTCCAAGATGGCCATATTATGATCC 713 | |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1103 T-TTGAGATTGAAGAAAAGGTGATGGTTGGTCAGTCTCCAAGATGGCCATATTATGATCC 1161 Query 714 CAATTCGCCTTTAGGAACTGCAAAAGATATAAAGGGGACATCTTTCGCAGACTCTCCTAT 773 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 1162 CAATTCGCCTTTAGGAACTGCAAAAGATATTAAGGGGGCATCTTTCGCAGACTCTCCTAT 1221 Query 774 GTCTAGTAGTAGCGACAGAGTTTATACTATCGACTCAATCCATGTGGGAGTTTCTGAAGT 833 |||||||||||||||| ||||||||||||||||||| || || ||||||||||||||||| Sbjct 1222 GTCTAGTAGTAGCGACCGAGTTTATACTATCGACTCCATTCACGTGGGAGTTTCTGAAGT 1281 Query 834 TAAGATTGACGACGAGCCTAATAAGATGAGTAAGGGAAAGTTAAATGGTGATCTCTGGAA 893 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1282 TAAGATTGACGATGAGCCTAATAAGATGAGTAAGGGAAAGTTAAATGGTGATCACTGGAA 1341 Query 894 CTCTCCGAGATACCAAGAACCATTCACGACTCAGCAAGGAGTTAACGAGCCAGATATAGA 953 |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1342 CTCTCCAAGATACCAAGAACCGTTCACGACTCAGCAGGGAGTTAACGAGCCAGATATAGA 1401 Query 954 GAAGCTTTACACAAGGCTTCAAGCACTTGAAGCAGACAGGGAATCATTGAGACAGATCAT 1013 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 1402 GAAGCTTTACACAAGGCTTCAAGCACTTGAGGCAGACAGGGAATCACTGAGACAGATCAT 1461 Query 1014 TGTGTCGATGCGGACAGATAAAGCTCAGTTGGTGTTACTGAAAGAAATCGCACAGCATTT 1073 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1462 TGTGTCGATGCGGACAGACAAAGCTCAGTTGGTGTTGCTGAAAGAAATCGCACAGCATTT 1521 Query 1074 AACAAAGGAAACCGGCACAACAAGCAGGCGACACCCGGTTAGCAAAATGTCATCTTTTAA 1133 |||||||||||||||| |||||||||||||| |||| |||||||||||| ||||| |||| Sbjct 1522 AACAAAGGAAACCGGCGCAACAAGCAGGCGAAACCCTGTTAGCAAAATGCCATCTCTTAA 1581 Query 1134 AGGATTCTCTGTAGTAACGTTCTTCAAGTGGATTGTGTCTTTCGTTTCGTGGAAGAGGAA 1193 || |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct 1582 AGTATTCTCTGTAGTAACGGTCTTCAAGTGGATTGTGTCTTTCGTTTCGTGGAAAAGGAA 1641 Query 1194 AGCCAGGCAAAGCAAGTATGTTTATGAATTGTCAGCAAATAATATGGGGATGCTTATGAT 1253 |||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1642 AGCCAGACAAAACAAGTATGTTTATGAGTTGTCAGCAAATAATATGGGGATGCTTATGAT 1701 Query 1254 TCTAGGCGAGGGATCTGGAGCTAGGAGATGGAGATGTTTAACAAGTTCACATGTCTAG 1311 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 1702 TCTAGGCGAGGGATCTGGAACTAGGAGATGGAGATGTTTAACGAGTTCACATGTCTAG 1759 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64507700325 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5