BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg324032
Length=2478
Score E
Sequences producing significant alignments: (Bits) Value
AT3G55020.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 3663 0.0
AT2G39280.2 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 1982 0.0
> AT3G55020.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr3:20388869-20394911 REVERSE LENGTH=2941
Length=2941
Score = 3663 bits (1983), Expect = 0.0
Identities = 2171/2259 (96%), Gaps = 23/2259 (1%)
Strand=Plus/Plus
Query 1 ATGAGGAGCGTT-TCG--GCCGCCGCCGCTGCTGCTGCTGCTTCTAAGCC-TCTTAATCC 56
|||||||||||| || |||||||| ||||||||||||||||||||||| || ||||||
Sbjct 199 ATGAGGAGCGTTGCCGCCGCCGCCGCTGCTGCTGCTGCTGCTTCTAAGCCTTC-TAATCC 257
Query 57 TCTCGTCGCCTTCGAGCACAAGAGGGATGCATATGGATTTCCTGTCAGACCTCAACATGT 116
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 258 TCTCGTCGCCTTTGAGCACAAGAGGGATGCATACGGATTTCCTGTCAGACCTCAACATGT 317
Query 117 GCAGAGATACAGAGAATATGCTGATATTTACAAGGAAGAAGAAGAAGAAAGGTCGGACAG 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 318 GCAGAGATACAGAGAATATGCTGATATTTACAAGGAAGAAGAAGAAGAAAGGTCGGACAG 377
Query 177 GTGGAACAGTTTCTTGGTAGATCATGTCGAATCGACTGAGTTACCTGCAAACGGATCATC 236
||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||||| ||
Sbjct 378 GTGGAGCAGTTTCTTGGAAGATCATGTTGAATCGACTGAGTTACCTACAAACGGATCTTC 437
Query 237 TGAAAATAGCCATGCACCATCTAGTGAAAGTGAGAAGGAAAAAGAAAAGGAATTAAACAA 296
|||||||| || ||||| | ||||||||||||||||||||||||||| |||||||||||
Sbjct 438 TGAAAATATTCACGCACCGTTTAGTGAAAGTGAGAAGGAAAAAGAAAAAGAATTAAACAA 497
Query 297 GGGGCCTGGTGAAGATCTGCATACTGACAAGTTAGGTTCTGATGTAACTCCTGATAATGC 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 498 GGGGCCTGGTGAAGATCTGCATACTGACAAGTTAGGTTCTGATGTAACTCCTGATAATGC 557
Query 357 AAGTGAAGAAGAAGGACACCCCGATGCAGAGAAGAATGTTCACAGAGTGCAATTATGGAC 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 558 CAGTGAAGAAGAAGGACACCCCGATGCAGAGAAGAATGTTCACAGAGTGCAATTATGGAC 617
Query 417 TGAGATCAGACCATCTTTACGATCAATTGAAGACTTGATGAGCATCCGTGTCAAGAAGAA 476
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 618 TGAGATCAGACCGTCTTTACGATCAATTGAAGACTTGATGAGCATCCGTGTCAAGAAGAA 677
Query 477 GGGAGATTTATCAAAAATCGAGCAAGAGGCTCTGAAAGTGAA-ATCTCCACCTTCATTCG 535
||| ||||||||||||| |||||||||||||| ||| ||||| || | |||||||||| |
Sbjct 678 GGGGGATTTATCAAAAAGCGAGCAAGAGGCTCCGAAGGTGAAGAT-TTCACCTTCATTTG 736
Query 536 ATGATGCCAAATCTGCCAAGGGAGCATCTGAGAATGATTCTGAAGACGAGTTCTATGATG 595
|||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 737 ATGATGCCAAATCTTCCAAGGGAGCATCTGATATTGATTCTGAAGACGAGTTCTATGATG 796
Query 596 TTGAGAGGTCGGATGTTCAGGATGGTTCGTCTTCAGATGGTACAAGTGTCTCTGGCATTC 655
|||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| || |
Sbjct 797 TTGAGAGGTCCGATGTTCAGGATGGTTCTTCTTCAGATGGTACAGGTGTCTCTGGTATCC 856
Query 656 CTGTTGCTCCTGATGCAAGTCCACTGTCTACATGTCCTTGGAAGGAAGAACTTGAAGTGC 715
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 857 CTGTTGCTGCTGATGCAAGTCCACTGTCTACATGTCCTTGGAAGGAAGAACTTGAAGTGC 916
Query 716 TGATTCGCGGCGGTGTACCTATGGCTCTGAGGGGGGAGTTATGGCAAGCATTTGTGGGTG 775
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct 917 TGATTCGCGGCGGTGTACCTATGGCTCTGAGGGGAGAGTTATGGCAAGCATTCGTGGGCG 976
Query 776 TGAGGAAACGACGCTGCAAGGATTATTACCAAAACCTTCTTGCTGCAGATAGTTCTGTAA 835
||||||||||||| |||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct 977 TGAGGAAACGACGATGCAAGGATTATTATCAAAACCTTCTTGCAGCAGATGGTTCTGTAA 1036
Query 836 ACACCATAGAGCAAGAGGATATGCAGCATGTTGATGATAAAGGTTCAATTACAGAATCTA 895
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1037 ACACCATAGAGCAAGAGGATATGCAGCATGTTGATGATAAAGGTTCAAGTACAGAATCTA 1096
Query 896 TTGCTGTTGTGGAAAAATGGAAAGGACAGATAGAAAAGGACTTACCTCGGACATTTCCTG 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1097 TTGCTGTTGTGGAAAAATGGAAAGGACAGATAGAAAAGGACTTACCTCGGACATTTCCTG 1156
Query 956 GTCATCCTGCTCTGGATGATGATGGTAGAAATGCTCTACGGCGTTTGCTTACTGCTTATG 1015
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1157 GTCATCCTGCTCTAGATGATGATGGTAGAAATGCTCTACGGCGTTTGCTTACTGCTTATG 1216
Query 1016 CTAGGCATAATCCTTCTGTTGGATACTGTCAGGCTATGAATTTCTTTGCTGCGCTTTTAT 1075
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1217 CTAGGCATAATCCTTCTGTAGGATACTGTCAGGCTATGAATTTCTTTGCTGCGCTTTTAT 1276
Query 1076 TGCTTTTGATGCCAGAAGAAAATGCCTTTTGGGCACTTACAGGACTTATTGATGACTACT 1135
||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct 1277 TGCTTTTGATGCCAGAAGAAAATGCCTTTTGGGCACTGATAGGACTCATTGATGACTACT 1336
Query 1136 TCAATGGTTATTATTCAGAAGAAATGATAGAGTCTCAGGTTGATCAACTAGTTCTGGAGG 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 TCAATGGTTATTATTCAGAAGAAATGATAGAGTCTCAGGTTGATCAACTAGTTCTGGAGG 1396
Query 1196 AGTTAGTTCGAGAAAGATTTCCTAAATTGGTTCATCATCTGGATTATCTTGGAGTGCAAG 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1397 AGTTAGTTCGAGAAAGATTTCCTAAATTGGTTCATCATCTGGATTATCTTGGAGTGCAAG 1456
Query 1256 TGGCTTGGGTTACAGGGCCATGGTTTCTTTCCATCTTCATGAATATGCTTCCATGGGAAA 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1457 TGGCTTGGGTTACAGGGCCATGGTTTCTTTCCATCTTCATGAATATGCTTCCATGGGAAA 1516
Query 1316 GTGTTCTTAGAGTCTGGGATGTGCTTCTCTTTGAGGGAACTCGTGTTATGCTTTTCAGAA 1375
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1517 GTGTTCTTAGAGTCTGGGATGTGCTTCTCTTTGAAGGAACTCGTGTTATGCTTTTCAGAA 1576
Query 1376 CTGCACTCGCATTGATGGAACTATATGGTCCTGCATTAGTTACTACGAAGGATGCTGGAG 1435
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1577 CAGCACTCGCATTGATGGAACTATATGGTCCTGCATTAGTTACTACGAAGGATGCTGGAG 1636
Query 1436 ACGCTGTTACTTTGCTACAATCACTGACTGGATCAACATTTGATAGCAGCCAGCTAGTTT 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1637 ACGCTGTTACTTTGCTACAATCACTGACTGGATCAACATTTGATAGCAGCCAGCTAGTTT 1696
Query 1496 TAACTGCTTGCATGGGTTACCAAAATGTACACGAAATTAGATTGCAGGAATTGCGAAGCA 1555
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1697 TAACTGCTTGCATGGGTTACCAAAATGTACATGAAATTAGATTGCAAGAATTGCGAAGCA 1756
Query 1556 AGCATAGGCCAGCTGTGATAGCTGCACTTGAAGAAAGATCAAAGGGGCTTCAAGCTTGGA 1615
||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||
Sbjct 1757 AGCATAGGCCAGCTGTGATCGCTGCACTTGAGGAAAGGTCAAAGGGGCTTCAAGCGTGGA 1816
Query 1616 GGGATTCTAAGGGCCTTGCCTCCAAATTATATAATTTTAAGCAAGACCCAAAATCTGTTC 1675
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1817 GAGATTCTAAGGGACTTGCCTCCAAATTATATAATTTTAAGCAAGACCCAAAATCTGTTT 1876
Query 1676 TGGTGGATGGAAAAGTCTCATTGTCAAATGGGAGTTTGTCTCGATCTGAGTCAGGATCAA 1735
|||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1877 TGGTGGATAGCAAAGCCTCATTGTCAAATGGGAGTTTGTCTCGATCTGAGTCAGGATCAA 1936
Query 1736 GTAATGCTGATGAAGTGTTGGTTAGCCTAACTGGGGATGGGGAGGTAGATTCTGTTCAAG 1795
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1937 GTAATGCAGATGAAGTGTTGGTTAGCCTAACTGGGGATGGGGAGGTAGATTCTGTTCAAG 1996
Query 1796 ATCTTCAAGCGCAGG--CTG------AA--CT---CT--GCAAGTTGCTTGAGGAGAAAC 1840
||||||||||||||| ||| || || || |||||||||||||||||||||
Sbjct 1997 ATCTTCAAGCGCAGGTTCTGTGGTTGAAGGCTGAACTCTGCAAGTTGCTTGAGGAGAAAC 2056
Query 1841 GATCAGCTCTACTTAGAGCTGAAGAGTTGGAGATTGCTCTCATGGAGATAGTAAAGGAAG 1900
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2057 GATCAGCTCTACTTAGAGCTGAAGAATTGGAGATTGCTCTCATGGAGATAGTAAAGGAAG 2116
Query 1901 ACAATCGGCGTCAATTGAGTGCCAAGGTCGAACAGTTAGAGCAAGAGATGGCCGAAGTTC 1960
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2117 ACAATCGGCGTCAATTGAGTGCCAAGGTCGAACAGTTAGAGCAAGAAATGGCCGAAGTTC 2176
Query 1961 AGAGACTCCTCTCTGATAAGCAGGAACAAGAAGGTGCAATGCTACAGGTCTTGATGCGGG 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2177 AGAGACTCCTCTCTGATAAGCAGGAACAAGAAGGTGCAATGCTACAGGTCTTGATGCGGG 2236
Query 2021 TGGAGCAAGAACAGAAGGTAACAGAAGATGCACGAAGATTTGCTGAGCAGGATGCAGAAG 2080
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2237 TGGAGCAAGAACAGAAGGTAACAGAAGATGCACGAATATTTGCTGAGCAGGATGCAGAAG 2296
Query 2081 CGCAGAGATATGCTGCTCAAGTCTTGCAGGAAAAATACGAGGAAGCTGTTGCTGCACTGG 2140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2297 CGCAGAGATATGCTGCTCAAGTCTTGCAGGAAAAATACGAGGAAGCTGTTGCTGCACTGG 2356
Query 2141 CTGAAATGGAGAAGAGAGCAGTGATGGCAGAGTCCATGCTCGAGGCGACTTTGCAGTATC 2200
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2357 CTGAAATGGAGAAGAGAGCAGTGATGGCAGAGTCCATGCTCGAGGCAACTTTGCAGTATC 2416
Query 2201 AATCTGGGCAACTCAAAGCACAACCTTCACCAC-AACCT 2238
||||||| ||||||||||||||||||||||||| |||||
Sbjct 2417 AATCTGGCCAACTCAAAGCACAACCTTCACCACGAACCT 2455
Score = 291 bits (157), Expect = 3e-77
Identities = 178/188 (95%), Gaps = 1/188 (1%)
Strand=Plus/Plus
Query 2292 ACCA-GAACCTCCTCCAAGCAGGATCAGTTTGCTAGCACGGCCATTTGGACTAGGGTGGC 2350
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2445 ACCACGAACCTCCTCCAAGCAGGATCAGTTTGCTAGCACGGCCATTTGGACTAGGGTGGC 2504
Query 2351 GAGACAAGAACAAGAACACAACACCTGAAAAAACTACGGAGCATGTTAATGACGAGAAGC 2410
| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2505 GCGACAAGAACAAGAACACAACACCTGAAAAATCTCCGGAGCATGTTAATGACGAGAAGC 2564
Query 2411 CATCATCAACAGAGGGAAAAGAGACTAACTCTGAACCAACAGACGGTAAGGTCCAAGACA 2470
|||||||||||||| |||||||||||||||||||||||| || ||||||||||||||
Sbjct 2565 AATCATCAACAGAGGCAAAAGAGACTAACTCTGAACCAACGGAAACTAAGGTCCAAGACA 2624
Query 2471 TTTCCTAG 2478
||||||||
Sbjct 2625 TTTCCTAG 2632
> AT2G39280.2 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr2:16401526-16406854 REVERSE LENGTH=2846
Length=2846
Score = 1982 bits (1073), Expect = 0.0
Identities = 1840/2201 (84%), Gaps = 89/2201 (4%)
Strand=Plus/Plus
Query 79 AGGGATGCATATGGATTTCCTGTCAGACCTCAACATGTGCAGAGATACAGAGAATATGCT 138
|||||||||||||||||| |||| || ||||| |||||||| |||||| ||||||||| |
Sbjct 325 AGGGATGCATATGGATTTTCTGTGAGGCCTCAGCATGTGCAAAGATACCGAGAATATGTT 384
Query 139 GATATTTACAAGGAAGAAGAAGAAGAAAGGTCGGAC-AGGTGGAACAGTTTCTTGGTAGA 197
|||| |||||||| ||||||| || ||||||| | ||||||| || |||| ||| |
Sbjct 385 AATATCTACAAGGAGGAAGAAGTGGAGAGGTCGG-CAAGGTGGAGCAATTTCCTGGAATT 443
Query 198 TCATGTC-GAATC-GACTGAGTTACCTGCAAACGGATCATCTGAAAATAGC-CATGCACC 254
||||| | ||||| | | | || |||| | || ||||| |||||||||| | |||| |
Sbjct 444 TCATG-CAGAATCTGGC-GTGTCACCTACGAATGGATCGTCTGAAAATA-CTCATG-TCA 499
Query 255 AT-CTAGTGAAAGTGAGAAGGAAAAAGAAAAGGAATTAAACAAGGG-GCCTG---GTGAA 309
|| | ||||||||||| ||| ||||||||||||||||||||||||| | ||| | ||
Sbjct 500 ATCCAAGTGAAAGTGACAAGAAAAAAGAAAAGGAATTAAACAAGGGTG-CTGAAAGAAAA 558
Query 310 GATCTGCATACTGACAAGTTAGGTTCTGATGTAACTCCTGATAATGCAAGTGAAGAAGAA 369
|||||| || |||||||| |||||||||| ||||||||| ||||| || || |||||
Sbjct 559 GATCTGAATGCTGACAAGCCAGGTTCTGATTTAACTCCTGGGAATGCGAGAGAGGAAGAT 618
Query 370 GGACACCCCGAT-GCAGAGAAGAATGTTCACAGAGTGCAATTATGGACTGAGATCAGACC 428
| | ||| || | |||||||||||| |||| ||| || |||||| |||||||||| ||
Sbjct 619 GAAGTTCCCAATAG-AGAGAAGAATGTGCACAAAGTTCAGTTATGGGCTGAGATCAGGCC 677
Query 429 ATCT-TTACGATCAATTGAAGACTTGATGAGCATCCGTGTCAAGAA-GAAGGGAGATTTA 486
|||| || | | ||||||| ||||||||||| |||||||||| || |||||| || ||
Sbjct 678 ATCTCTT-CAAGCAATTGAGGACTTGATGAGTGTCCGTGTCAA-AATGAAGGGGGA-TT- 733
Query 487 TCAAAAAT--CGAGCAAGAGGCTCTGAAAGTGAAATCTCC--A-CCTTC-ATTCGATGAT 540
|| |||| ||||||||| |||| |||| || ||| ||| | || || | | |||||
Sbjct 734 CCACAAATGGCGAGCAAGAAGCTCAGAAATTG-AAT-TCCTTAGCC-TCAACT-GATGA- 788
Query 541 G-CCAAATCTGCCAAGGGAGCATCTGAGAATGATTCTGAAGACGAGTTCTATGATGTTGA 599
| || | ||| | ||||||| || |||||||||||| ||||||||||||||||||| ||
Sbjct 789 GACCGAGTCTTCAAAGGGAGTATGTGAGAATGATTCCGAAGACGAGTTCTATGATGCGGA 848
Query 600 GAGGTCGGAT---GTTCAGGATGGTTCGTCTTCAGATGGTACAAGTGTCTCTGGCAT-TC 655
||| || ||| |||||||||| | ||||||||||| ||||||||||| |||| |
Sbjct 849 GAGATCAGATCCAATTCAGGATGG-T--TCTTCAGATGGCACAAGTGTCTCCAGCATGT- 904
Query 656 CTGTTGCTCCTGATGCAAG--T-CC-ACTGTCTACATGTCCTTGGAAGGAAGAACTTGAA 711
||| |||| ||||||| || | || | | ||| |||| || ||||| || |||||||||
Sbjct 905 CTGCTGCTGCTGATGC-AGCTTCCCTAGTATCTGCATGCCCCTGGAAAGACGAACTTGAA 963
Query 712 GTGCTGATTCGCGGCGGTGTACCTATGGCTCTGAGGGGGGAGTTATGGCAAGCATTTGTG 771
|| || |||| ||||||| |||||||||||||||||| ||| | ||||||||||||| |
Sbjct 964 GTTCTTATTCATGGCGGTGCACCTATGGCTCTGAGGGGTGAGCTCTGGCAAGCATTTGCG 1023
Query 772 GGTGTGAGGAAACGAC-GCTGCAAGGATTATTACCAAAACCTTCTT-GCTGCAGATAGTT 829
|| || | |||||| | | | |||| ||||||||||||| | | || ||||||||||| |
Sbjct 1024 GGAGTCAAGAAACGTCGGGT-CAAGAATTATTACCAAAATC-TATTAGCTGCAGATAG-T 1080
Query 830 CT-GTAAAC-ACCATAGAGCAAGAGGAT-ATGCAGCATGTTGATGATAAAGGTTCAATTA 886
|| | |||| | ||||||||| || | | ||||||||| ||||| |||||||||| ||
Sbjct 1081 CTAGGAAACGA-CATAGAGCAGGA-GCTCATGCAGCATACAGATGAGAAAGGTTCAAGTA 1138
Query 887 CAGAATCTAT-TGCTGTTGTGGAAAAATGGAAAGGACAGATAGAAAAGGACTTACCTCGG 945
|||| | | | |||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct 1139 CAGACCCCCTCT-CTGTTGTGGAAAAATGGAAAGGTCAGATAGAAAAGGATTTACCCCGG 1197
Query 946 ACATTTCCTGGTCATCCTGCTCTGGATGATGATGGT-AGAAATGCTCT-ACGGCGTTTGC 1003
|||||||| ||||||||||| || ||||||||| | ||||||||||| | |||| ||||
Sbjct 1198 ACATTTCCAGGTCATCCTGCCCTAGATGATGAT-TTCAGAAATGCTCTGA-GGCGATTGC 1255
Query 1004 TTACTGCTTATGCTAGGCATAATCCTTCTGTTGGATACTGTCAGGCTATGAATTTCTTTG 1063
| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |
Sbjct 1256 TAACTGCTTATGCCAGGCATAATCCCTCTGTTGGATACTGTCAGGCAATGAATTTCTTCG 1315
Query 1064 CTGCGCTTTTATTGCTTTTGATGCCAGAAGAAAATGCCTTTTGGGCACTTACAGGACTTA 1123
|||| |||||||| ||| ||||||| ||||| ||||| |||||| | ||||||||| | |
Sbjct 1316 CTGCACTTTTATTACTTCTGATGCCCGAAGAGAATGCTTTTTGGTCGCTTACAGGAATCA 1375
Query 1124 TTGATGACTACTTCAATGGTTATTATTCAGAAGAAATGATAGAGTCTCAGGTTGATCAAC 1183
|||||||||||||| ||| ||||||||||||||| ||| | ||||| |||||||| ||||
Sbjct 1376 TTGATGACTACTTCCATGATTATTATTCAGAAGAGATGCTCGAGTCCCAGGTTGACCAAC 1435
Query 1184 TAGTTCTGGAGGAGTTAGTTCGAGAAAGATTTCCTAAATTGGTTCATCATCTGGATTATC 1243
|||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1436 GAGTTCTGGAGGAGTTACTTCGAGAGAGATTTCCTAAATTGGTTCATCATCTAGATTATC 1495
Query 1244 TTGGAGTGCAAGTGGCTTGGGTTACAGGGCCATGGTTTCTTTCCATCTTCATGAATATGC 1303
|||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct 1496 TTGGAGTGCAGGTGGCTTGCGTTACAGGGCCATGGTTTCTTACCATCTTCATTAATATGC 1555
Query 1304 TTCCATGGGAAAGTGTTCTTAGAGTCTGGGATGTGCTTCTCTTTGAGGGAACTCGTGTTA 1363
||||||||||||||||||| ||||| |||||||||||||| ||||| |||| ||||||||
Sbjct 1556 TTCCATGGGAAAGTGTTCTCAGAGTGTGGGATGTGCTTCTATTTGAAGGAAATCGTGTTA 1615
Query 1364 TGCTTTTCAGAACTGCACTCGCATTGATGGAACTATATGGTCCTGCATTAGTTACTACGA 1423
||||||||||||| |||||||||||||||||| | |||||||||||||| ||||| || |
Sbjct 1616 TGCTTTTCAGAACAGCACTCGCATTGATGGAATTTTATGGTCCTGCATTGGTTACAACCA 1675
Query 1424 AGGATGCTGGAGACGCTGTTACTTTGCTACAATCACTGACTGGATCAACATTTGATAGCA 1483
|||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 1676 AGGACATTGGAGATGCTGTTACTTTGCTACAATCAATGACTGGTTCAACATTTGATAGCA 1735
Query 1484 GCCAGCTAGTTTTAACTGCTTGCATGGGTTACCAAAATGTACACGAAATTAGATTGCAGG 1543
||||||| ||||| ||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct 1736 GCCAGCTCGTTTTCACTGCTTGCATGGGTTACCAAAATGTACATGAAAGTAAATTGCAGG 1795
Query 1544 AATTGCGAAGCAAGCATAGGCCAGCTGTGATAGCTGCACTTGAAGAAAGATCAAAGGGGC 1603
|| | ||||||| || |||||||| || ||||||||| |||| ||||||| |||||| |
Sbjct 1796 AACTAAGAAGCAAACACAGGCCAGCAGTAATAGCTGCATTTGAGGAAAGATTAAAGGGTC 1855
Query 1604 TTCAAGCTTGGAGGGATTCTAAGGGC-CTTGCCTCCAAATTATATAATTTTAAGCAAGAC 1662
||||||||||||||||||| || | | || || |||||||| |||||| |||||||||
Sbjct 1856 TTCAAGCTTGGAGGGATTCAAAAGACACT-GCAACCAAATTACATAATTCCAAGCAAGAC 1914
Query 1663 CCAAAATCTGTTCTGGTGGATGGAAAAGTCTCATTGTCAAATGGGAGTTTGTCTCGATCT 1722
||||| |||||| | | | | | |||| ||||||||||||||||||||| ||||| |||
Sbjct 1915 CCAAATTCTGTT-T--TAGCTAGCAAAGCCTCATTGTCAAATGGGAGTTTATCTCGTTCT 1971
Query 1723 GAGTCAGGATCAAGTAATGCTGATGA-AGTGTTGGTTAGCCTAACTGGGGATGGGGAGGT 1781
|| || ||||| ||| |||| || || | | || ||||||| ||||||||| | ||| |
Sbjct 1972 GAATCGGGATCCAGTTATGCAGACGACA-TCTTTATTAGCCTGACTGGGGATTGTGAGAT 2030
Query 1782 AGAT-TCTGTTCAAGATCTTCAAGCG-CAGGCTGAACTCTGCAAGTTGCTTGAGGAGAAA 1839
|||| | | ||||||||||||||| | |||| ||||||| |||||||||| ||||||||
Sbjct 2031 AGATATTT-TTCAAGATCTTCAAG-GACAGGGTGAACTCCACAAGTTGCTTCAGGAGAAA 2088
Query 1840 CGATCAGCTCTACTTAGAGCTGAAGAGTTGGAGATTGCTCTCATGGAGATAGT-AAAGGA 1898
|||| ||| |||| |||||||||||||||||| | |||||||||||||| || ||| |
Sbjct 2089 AGATCTGCTTTACTAAGAGCTGAAGAGTTGGAGGTAGCTCTCATGGAGATGGTCAAAC-A 2147
Query 1899 AGACAATCGGCGTCAA-TTGAGTGCCAAGGTCGAACAGTTAGAGCAAGAGATGGCCGAAG 1957
|||||||||||||||| || || || ||| | || ||||||||||||| | || | || |
Sbjct 2148 AGACAATCGGCGTCAACTTAAG-GCTAAGATTGAGCAGTTAGAGCAAGGGGTGACAGA-G 2205
Query 1958 -TTCAGA-GACTCCTCTCTGATAAGCAGGAA-CAAGAAGGTGCAATGCTACAGGTCTTGA 2014
||| || |||| | ||||||||| ||| | |||||| |||| ||| ||||||||||||
Sbjct 2206 CTTC-GAAGACTTGTTTCTGATAAG-AGGGAGCAAGAAAGTGCTATGATACAGGTCTTGA 2263
Query 2015 TGCGGGTGGAGCAAGAACAGAAGGTAACAGAAGATGCACGAAGATTTGCTGAGCAGGATG 2074
||||| ||||||||||||| || ||||||||||||||||| ||| |||||||||||||||
Sbjct 2264 TGCGGATGGAGCAAGAACATAAAGTAACAGAAGATGCACGGAGACTTGCTGAGCAGGATG 2323
Query 2075 CAG-AAGCGCAGAGATATGCTGCTCAAGT-CTTGCAGGAAAAATACGAGGAAGCTGTTGC 2132
||| || ||||||||||||||||| |||| ||| |||||||| || || || ||||||||
Sbjct 2324 CAGCAA-CGCAGAGATATGCTGCTGAAGTGCTT-CAGGAAAAGTATGAAGAGGCTGTTGC 2381
Query 2133 TGCACTGGCTGAAATGGAGAAGAGAGCAGTGATGGCAGAGTCCATGCTCGAGGCGACTTT 2192
|| || || || |||||| |||| ||||| ||||||||||||||| | |||||||||||
Sbjct 2382 AGCTCTCGCGGAGATGGAGGAGAGGGCAGTTATGGCAGAGTCCATGTTGGAGGCGACTTT 2441
Query 2193 GCAGTATCAATCTGGGCAACTCAAAGCACAACCTTCACCAC 2233
||||||||||||||| ||| | |||||||||||||||||||
Sbjct 2442 GCAGTATCAATCTGGCCAAGTTAAAGCACAACCTTCACCAC 2482
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122959177293
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5