BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg324164 Length=504 Score E Sequences producing significant alignments: (Bits) Value AT3G56520.1 | Symbols: | NAC (No Apical Meristem) domain trans... 678 0.0 > AT3G56520.1 | Symbols: | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr3:20947107-20947731 REVERSE LENGTH=528 Length=528 Score = 678 bits (367), Expect = 0.0 Identities = 448/487 (92%), Gaps = 5/487 (1%) Strand=Plus/Plus Query 1 ATGGAGCCAACACACAAAGCTTTGCCCGTAGGATTCAGGTTTCGTCCTACAAACTGTGAG 60 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 1 ATGGAGCCAACACACAGAGCTTTGCCCGTAGGATTCAGGTTTCGTTCTACAAACTGTGAG 60 Query 61 ATTGCAAACTATTTCTTGAAGAAAAAAGCTTTAGGACAACCCATGAAAGCTCGTACGGTA 120 ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 61 ATTTCAAACTATTTTTTGAAGAAAAAAGCTTTAGGACAACCCATGAAAGCTCGTACGATA 120 Query 121 CCTGAAGAGTGTCATGATGTCTTCTCGAGACATCCTCGTGATTTTCCTGGCTATCCAAAA 180 |||||||||||||||||| ||||||| |||||||| | |||| | ||||| ||||||| Sbjct 121 CCTGAAGAGTGTCATGATATCTTCTCAAGACATCCGCATGATCTGCCTGGTTATCCAAGT 180 Query 181 GAAGAGCACTGGTACTATTTTTGCAGAAAACGTAACAACCAAGTTACTAGTAACTCTCCT 240 ||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 181 GAAGAACATTGGTACTATTTTTGCAGAAAACGTGACAACCAAGTTACTAGTAACTCTCAT 240 Query 241 AATCTCTGGACACCAATCGGAGAAGAAACTAATGTGTTAGATCCAAAGAATAATGGTGCC 300 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| Sbjct 241 AATCTCTGGACACCAATCGGAGAAGAAACCAATGTGCTAGATCCAAAGAATAATGATGCA 300 Query 301 TTAGTCGGTATCAAACGTCGGCTTACTCTCATTGCGCAAGAAGAAGAA---TCTGATAAT 357 ||||| ||||| || |||||| ||||||| |||||||||||||||||| ||||||||| Sbjct 301 TTAGTTGGTATTAAGCGTCGGTTTACTCTTATTGCGCAAGAAGAAGAAGAATCTGATAAT 360 Query 358 ATTTGTTTGTCTGATGAAGAAGAAGCTCCAAAGTATAACTGGTTCATGGATGAAATTAGC 417 |||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct 361 ATTTGTTTATCTGATGATGAAGAAGCTTTAAAGTATAATTGGTTCATGGATGAAATTAGC 420 Query 418 CTCCCACAAACAGTAGCAGA-TACTGATTGGGTTTTATGCCATATTTTTGGCAAGACGAT 476 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| || Sbjct 421 CTCCCACAAACAGTAGC-GAATACTGATTGGGTTTTATGCCATATTTTTGGCAAGAAGAC 479 Query 477 TAAACCC 483 ||||||| Sbjct 480 TAAACCC 486 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24062156413 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5