BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg324175
Length=1500
Score E
Sequences producing significant alignments: (Bits) Value
AT3G56630.1 | Symbols: CYP94D2 | cytochrome P450, family 94, su... 2283 0.0
AT1G34540.1 | Symbols: CYP94D1 | cytochrome P450, family 94, su... 2091 0.0
AT5G33441.1 | Symbols: | pseudogene, similar to cytochrome P45... 763 0.0
> AT3G56630.1 | Symbols: CYP94D2 | cytochrome P450, family 94,
subfamily D, polypeptide 2 | chr3:20978937-20980632 FORWARD
LENGTH=1636
Length=1636
Score = 2283 bits (1236), Expect = 0.0
Identities = 1415/1503 (94%), Gaps = 6/1503 (0%)
Strand=Plus/Plus
Query 1 ATGGAGcttttcatctttatcttcctcctctgtttccctatcttcatcttcttcatcttc 60
||||||| ||||||| | |||| ||||||||||||||||||| |||||||||||||||||
Sbjct 17 ATGGAGCATTTCATCCTCATCTCCCTCCTCTGTTTCCCTATCGTCATCTTCTTCATCTTC 76
Query 61 ttccccaagaattcttcttcAGAATTTGGTTTCAAGTCGTATCCGATCGTCGGAAGTTTA 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 77 TTCCCCAAGAATTCTTCTTCAGAATTTGGTTTCAAGTCGTATCCGATCGTTGGAAGCTTA 136
Query 121 CCTGGTCTTGTGAATAACCGTCACCGATTCCTCGACTGGACGGTGGAGACTCTGTCTCGA 180
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 137 CCTGGTCTAGTGAATAACCGTCACCGATTCCTCGACTGGACGGTGGAAACTCTGTCTCGA 196
Query 181 TGTCCAACCCAAACGGCGATTTTCCGGCGACCAGGGAAGCAACAGTTCGTCATGACGGCG 240
|| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 197 TGCCCAACCCAAACGGCGATTTTTCGGCGACCAGGGAAGCTGCAGTTCGTCATGACGGCG 256
Query 241 AATCCAGCTAACGTCGAGTACATGCTCAAGACGAAATTCGAGAGTTTCCCTAAAGGCGAG 300
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 257 AATCCAGCTAACGTCGAGTATATGCTCAAGACGAAATTCGAAAGTTTCCCTAAAGGCGAA 316
Query 301 CGGTTTATCTCGATTCTTGAGGATTTTCTCGGCCGCGGGATTTTTAACTCCGATGGTGAG 360
||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 317 CGGTTCATCTCGATTCTCGAGGATTTTCTCGGCCGCGGGATTTTTAACTCCGACGGTGAG 376
Query 361 ATGTGGTGGAAACAGAGGAAGACTGCGAGTTATGAATTCAGTACTAAATCTCTCCGTGAC 420
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 377 ATGTGGTGGAAACAGAGGAAGACGGCCAGTTATGAATTCAGTACTAAATCTCTCCGTGAC 436
Query 421 TTTGTTATGAGCAACGTCACCGTCGAAATCAACACAAGGCTTGTTCCGGTGTTAGCAGAA 480
|| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 437 TTCGTTATGAGCAACGTCACCGTCGAAATCAACACTAGGCTTGTTCCAGTGTTAGCAGAA 496
Query 481 GCTGCAACCACCGGAAAATTGATAGATCTTCAAGACATATTGGAGCGATTCGCGTTTGAT 540
|||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 497 GCTGCAACCAACGGAAAATTGATAGATCTTCAAGACATATTGGAGCGGTTCGCGTTCGAT 556
Query 541 AACATCTGCAAATTAGCCTTCAACGTTGATTCAGCTTGTCTCGGTGACGACGGAGCCGCC 600
|||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct 557 AACATCTGTAAATTAGCTTTCAACGTTGATTCAGCTTGTCTCGGCGACGACGGAGCAGCC 616
Query 601 GGTGTAAACTTCATGCAGGCCTTTGAAACGGCGGCGACGATCATCTCGCAACGGTTTCAG 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 617 GGTGTAAACTTCATGCAGGCCTTTGAAACGGCGGCGACGATCATCTCGCAACGGTTTCAG 676
Query 661 TCTGTGGTTTCGTATTCATGGAAGATTAAAAAGAAACTTAACATTGGATCAGAGAAAGTT 720
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 677 TCTGTGATTTCGTATTCATGGAAGATTAAAAAGAAACTCAACATTGGATCAGAGAGAGTT 736
Query 721 CTGAGAGAATCAATCGTGACCGTTCATAAATTCGCAGACGAGATCGTGCGTAACAGGATT 780
||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 737 CTGAGAGAATCAATCATGATCGTCCATAAATTCGCAGACGAGATCGTGCGTAACAGGATT 796
Query 781 GATCAAGGAA-GATTATGTGACCAGAAGGAAGATTTGCTTTCTCGGTTTATCAGCAAGGA 839
|| ||||||| | | | |||| || |||||||||||||||||||||||||||||||||||
Sbjct 797 GAACAAGGAAAGGTAA-GTGATCACAAGGAAGATTTGCTTTCTCGGTTTATCAGCAAGGA 855
Query 840 GGAGATGAATTCGCCGGAGATACTTCGTGACATTGTCATAAGCTTCATTCTCGCGGGACG 899
|||||||||||| ||||||||||||||||| ||||||||||| ||||| || || |||||
Sbjct 856 GGAGATGAATTCTCCGGAGATACTTCGTGATATTGTCATAAGTTTCATACTTGCAGGACG 915
Query 900 AGACACGACTTCCTCTGCTTTGAGCTGGTTCTTTTGGTTACTCTCTATGCATCCAGAGGT 959
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 916 AGACACTACTTCCTCTGCTTTGAGCTGGTTCTTTTGGTTGCTCTCTATGCATCCAGAAGT 975
Query 960 GGAAA-ACAAGATTCTACAAGAGTTAGACTCGATTCGAGCACGAACAGGGAAGCGAATCG 1018
| ||| | ||||||||||||||| || |||||||||||| ||||||||||||||||||||
Sbjct 976 G-AAAGATAAGATTCTACAAGAGCTAAACTCGATTCGAGAACGAACAGGGAAGCGAATCG 1034
Query 1019 GGGAAGTTTACGGGTTTGAAGATCTTAAACTGATGAATTATCTGCATGCGGCGATAACTG 1078
||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct 1035 GGGAAGTTTACGGGTTTGAAGATCTTAAACTGATGAATTATCTTCACGCAGCGATAACTG 1094
Query 1079 AATCTTTAAGATTGTATCCGCCTGTGCCAGTGGACACAATGAGTTGTGCTGAGGACAATG 1138
||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1095 AATCTCTACGATTGTATCCGCCAGTGCCAGTGGATACAATGAGTTGTGCTGAGGACAATG 1154
Query 1139 TGTTGCCTGATGGGACATTTGTAGGGAAATCTTGGGGGATAAGCTATAACGCGTATGCGA 1198
|||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 1155 TGTTGCCTGATGGGACATTTATAGGGAAAGATTGGGGGATAAGCTATAACGCGTATGCGA 1214
Query 1199 TGGGAAGGATGGAGAGTATTTGGGGTAAAGATTGTGATCGGTTTGATCCCGAGAGGTGGA 1258
|||| |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||
Sbjct 1215 TGGGGAGGATGGAGAGTATTTGGGGGAAAGATTGCGATCGGTTTGATCCTGAGAGGTGGA 1274
Query 1259 TTAATGAAACAAATGGTGGTTTTAGAGGTGAGAATCCTTACAAGTTTCCTGCGTTTCACG 1318
|| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1275 TTGATGAAACAAATGGTGGTTTTAGAGGTGAGAATCCTTATAAGTTTCCTGCGTTTCATG 1334
Query 1319 CAGGACCAAGGATGTGTTTAGGGAAGGAGATGGCTTATATTCAGATGAAATCAATAGTCG 1378
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1335 CGGGACCAAGGATGTGTTTAGGGAAGGAGATGGCTTATATTCAGATGAAATCGATAGTCG 1394
Query 1379 CTGCAGTTTTAGAGCGGTTTGTGGTTGAGGTTCCGGGGAAGAAGGAGCGTCCTGAGATTC 1438
|||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1395 CTGCGGTTTTAGAGAGGTTTGTGGTTGAGGTTCCAGGGAAGAAGGAGCGTCCTGAGATTC 1454
Query 1439 TATTGTCAGTGACACTTAGAATCAGAGGAGGTTTGT-TGGTGAGGGTACAAGAGAGATCT 1497
|| |||| ||||||||||||||||||||||||||| || |||| |||||||| ||||||
Sbjct 1455 TAATGTCGGTGACACTTAGAATCAGAGGAGGTTTGAATG-TGAGAGTACAAGAAAGATCT 1513
Query 1498 TGA 1500
|||
Sbjct 1514 TGA 1516
> AT1G34540.1 | Symbols: CYP94D1 | cytochrome P450, family 94,
subfamily D, polypeptide 1 | chr1:12637054-12638550 FORWARD
LENGTH=1497
Length=1497
Score = 2091 bits (1132), Expect = 0.0
Identities = 1384/1506 (92%), Gaps = 15/1506 (1%)
Strand=Plus/Plus
Query 1 ATGGAGcttttcatctttatcttcctcctctgtttccctatcttcatcttcttcatcttc 60
|||| ||| || || || ||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1 ATGGCGCTCTTAATATTCATCTTCCTCCTCTGTTTCCCTATCTCCATCTTCTTTATCTTC 60
Query 61 ttccccaagaattcttcttcAGAATTTGGTTTCAAGTCGTATCCGATCGTCGGAAG-TTT 119
||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 61 TTCACCAAGAAATCTTCTTCAGAATTTGGTTTCAAGTCGTATCCAATCGTCGGAAGCTTT 120
Query 120 ACCTGGTCTTGTGAATAACCGTCACCGATTCCTCGACTGGACGGTGGAGACTCTGTCTCG 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 121 -CCTGGTCTTGTGAATAACCGTCACCGATTCCTCGACTGGACGGTGGAGACTCTTTCTCG 179
Query 180 ATGTCCAACCCAAACGGCGATTTTCCGGCGACCAGGGAAGCAACAGTTCGTCATGACGGC 239
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 180 ATGTCCAACCCAAACGGCGATTTTCCGGCGACCAGGGAAGCAACAACTCATCATGACGGC 239
Query 240 GAATCCAGCTAACGTCGAGTACATGCTCAAGACGAAATTCGAGAGTTTCCCTAAAGGCGA 299
||||||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||| |
Sbjct 240 GAATCCATCTAACGTCGAGTATATGCTCAAGACCAAATTCGAGAGCTTCCCTAAAGGCCA 299
Query 300 GCGGTTTATC-TCGATTCTTGAGGATTTTCTCGGCCGCGGGATTTTTAACTCCGATGGTG 358
| ||||| | ||| ||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 300 ACAGTTTA-CTTCGGTTCTTGAGGATTTTCTCGGCCACGGGATTTTTAATTCCGATGGTG 358
Query 359 AGATGTGGTGGAAACAGAGGAAGACTGCGAGTTATGAATTCAGTACTAAATCTCTCCGTG 418
| ||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||
Sbjct 359 ATATGTGGTGGAAACAGAGGAAGACGGCGAGCTACGAATTTAGTACTAAATCTCTCCGTG 418
Query 419 ACTTTGTTATGAGCAACGTCACCGTCGAAATCAACACAAGGCTTGTTCCGGTGTTAGCAG 478
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 419 ACTTTGTTATGAGCAACGTCACCGTCGAAATCAACACCAGGCTTGTTCCGGTGTTAGTAG 478
Query 479 AAGCTGCAACCACCGGAAAATTGATAGATCTTCAAGACATATTGGAGCGATTCGCGTTTG 538
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct 479 AAGCTGCAACCACCGGAAAGTTGATAGATCTCCAAGACATATTGGAGCGATTCGCGTTCG 538
Query 539 ATAACATCTGCAAATTAGCCTTCAACGTTGATT-CAGCTTGTCTCGGTGACGACGGAGCC 597
|||||||||| |||||||| ||||| ||||||| | ||||||||||| ||||||||||
Sbjct 539 ATAACATCTGTAAATTAGCTTTCAATGTTGATTGC-GCTTGTCTCGGCCACGACGGAGCG 597
Query 598 GCCGGTGTAAACTTCATGCAGGCCTTTGAAACGGCGGCGACGATCATCTCGCAACGGTTT 657
| ||||||||||||||||| |||||| ||||| || |||||||| || ||||| ||||||
Sbjct 598 GTCGGTGTAAACTTCATGCGGGCCTTCGAAACCGCTGCGACGATTATATCGCAGCGGTTT 657
Query 658 CAGTCTGTGGTTTCGTATTCATGGAAGATTAAAAAGAAACTTAACATTGGATCAGAGAAA 717
| ||| |||| ||||| | |||||| |||||||||||||||||||||||||||||||| |
Sbjct 658 CGGTCGGTGGCTTCGTGTGCATGGAGGATTAAAAAGAAACTTAACATTGGATCAGAGAGA 717
Query 718 GTTCTGAGAGAATCAATCGTGACCGTTCATAAATTCGCAGACGAGATCGTGCGTAACAGG 777
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 718 GTTCTGAGAGAATCAATCGCGACCGTCCATAAATTCGCAGACGAGATCGTGCGTAACAGG 777
Query 778 ATTGATCAAGGAAGATTATGTGACCAGAAGGAAGATTTGCTTTCTCGGTTTATCAGCAAG 837
|||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||
Sbjct 778 ATTGATCAAGGAAGATCAAGTGACCACAAGGAAGATTTGCTTTCTCGGTTTATCAGCAAG 837
Query 838 GAGGAGATGAATTCGCCGGAGATACTTCGTGACATTGTCATAAGCTTCATTCTCGCGGGA 897
|||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct 838 GAGGAGATGAATTCGCCGGAGATACTCCGTGACATTGTCATAAGTTTCATCCTCGCGGGA 897
Query 898 CGAGACACGACTTCCTCTGCTTTGAGCTGGTTCTTTTGGTTACTCTCTATGCATCCAGAG 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 CGAGACACGACTTCCTCTGCTTTGAGCTGGTTCTTTTGGTTACTCTCTATGCATCCAGAG 957
Query 958 GTGGAAAACAAGATTCTACAAGAGTTAGACTCGATTCGAGCACGAACAGGGAAGCGAATC 1017
|||||| | |||||||| |||||| || |||||||||| |||||||| ||||||||||||
Sbjct 958 GTGGAAGATAAGATTCTGCAAGAGCTAAACTCGATTCGCGCACGAACTGGGAAGCGAATC 1017
Query 1018 GGGGAAGTTTACGGGTTTGAAGATCTTAA-ACTGATGAATTATCTGCATGCGGCGATAAC 1076
||||||||||||||||||||| ||||||| | ||||||||||||| || || || |||||
Sbjct 1018 GGGGAAGTTTACGGGTTTGAACATCTTAAGA-TGATGAATTATCTTCACGCTGCTATAAC 1076
Query 1077 TGAATCTTTAAGATTGTATCCGCCTGTGCCAGTGGACACAATGAGTTGTGCTGAGGACAA 1136
||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||
Sbjct 1077 TGAATCTTTAAGATTGTATCCACCTGTGCCAGTGGACATAAAGAGTTGTGCTGAGGACAA 1136
Query 1137 TGTGTTGCCTGATGGGACATTTGTAGGGAAATCTTGGGGGATAAGCTATAACGCGTATGC 1196
||| ||||||||||||||||||||||| ||| ||||| |||| ||||||| | |||
Sbjct 1137 TGTATTGCCTGATGGGACATTTGTAGGTAAAGGTTGGGCAATAACCTATAACATATTTGC 1196
Query 1197 GATGGGAAGGATGGAGAGTATTTGGGGTAAAGATTGTGATCGGTTTGATCCCGAGAGGTG 1256
|||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct 1197 AATGGGAAGGATGGAGAGTATTTGGGGGAAAGATTGTGATCGTTTTGATCCTGAGAGGTG 1256
Query 1257 GATTAATGAAACAAATGGTGGTTTTAGAGGTGAGAATCCTTAC-AAGTTTCCTGCGTTTC 1315
|||| |||||||||||||| |||||||||||||| |||||| | ||||||||||||||||
Sbjct 1257 GATTGATGAAACAAATGGTTGTTTTAGAGGTGAGGATCCTT-CTAAGTTTCCTGCGTTTC 1315
Query 1316 ACGCAGGACCAAGGATGTGTTTAGGGAAGGAGATGGCTTATATTCAGATGAAATCAATAG 1375
| || ||||||||||||||| |||||||||| |||||||||||||| |||||||| ||||
Sbjct 1316 ATGCTGGACCAAGGATGTGTGTAGGGAAGGATATGGCTTATATTCAAATGAAATCGATAG 1375
Query 1376 TCGCTGCAGTTTTAGAGCGGTTTGTGGTTGAGGTTCCGGGGAAGAAGGAGCGTCCTGAGA 1435
||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct 1376 TCGCTGCGGTTTTAGAGCGGTTTGTGGTTGAGGTTCCAGGGAAG--G-AGCGTCCTGAGA 1432
Query 1436 TTCTATTGTC-AGTGACACTTAGAATCAGAGGAGGTTTGTTGGTGAGGGTACAAGAGAGA 1494
|||||||||| | ||||||||||||||| |||||||||||| | ||||||||||||||||
Sbjct 1433 TTCTATTGTCGA-TGACACTTAGAATCAAAGGAGGTTTGTTTGCGAGGGTACAAGAGAGA 1491
Query 1495 TCTTGA 1500
||||||
Sbjct 1492 TCTTGA 1497
> AT5G33441.1 | Symbols: | pseudogene, similar to cytochrome P450-like
protein, blastp match of 46% identity and 6.5e-67 P-value
to GP|20804570|dbj|BAB92262.1||AP003232 cytochrome P450-like
protein {Oryza sativa (japonica cultivar-group)} | chr5:12737079-12738581
REVERSE LENGTH=1503
Length=1503
Score = 763 bits (413), Expect = 0.0
Identities = 607/696 (87%), Gaps = 31/696 (4%)
Strand=Plus/Plus
Query 805 AAGGAAGATTTGCTTTCTCGGTTTATCAGCAAGGAGGAGATGAATTCGCCGGAGATACTT 864
|||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||
Sbjct 834 AAGGAAGATTTGCTTTCTCGGTTTATTAGCAAGGAGGAGATGAATTCTCTGGAGATACTT 893
Query 865 CGTGACATTGTCAT-AAGCTTCATTCTCGCGGGACGAGACACGACTTCCTCTGCTTTGAG 923
||||| |||||||| ||| || ||||||| |||||| |||||||||||||||||||||||
Sbjct 894 CGTGATATTGTCATAAAGTTTTATTCTCGAGGGACGTGACACGACTTCCTCTGCTTTGAG 953
Query 924 CTGGTTCTTTTGGTTACTCTCTATGCATCCAGAGGTGGAAAACAAGATTCTACAAGAGTT 983
|||||||||||||||||||||||||||||||||||||||| | || |||||| ||||| |
Sbjct 954 CTGGTTCTTTTGGTTACTCTCTATGCATCCAGAGGTGGAAGATAAAATTCTAAAAGAGCT 1013
Query 984 AGACTCGATTCGAGCACGAACAGGGAAGCGAATCGGGGAAGTTTACGGGTTTGAAGATCT 1043
| | | |||||| ||||||||| |||||| ||| |||||||||||||| ||||||||||
Sbjct 1014 AAAATTGATTCGGGCACGAACAAGGAAGCAAATTAGGGAAGTTTACGGGATTGAAGATCT 1073
Query 1044 TAAACTGATGAATTATCTGCATGCGGCGATAACTGAATCTTTAAGATTGTATCCGCCTGT 1103
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | |||
Sbjct 1074 TAAACTGATGAATTATCTTCATGCAGCGATAACTGAATCTTTAAGATTGTATCCACATGT 1133
Query 1104 GCCAGTGGACACAATGAGTTGTGCTGAGGACAATGTGTTGCCTGATGGGACATTTGTAGG 1163
|||||| || ||||||||||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct 1134 GCCAGTTGATACAATGAGTTGTGTTGAGGACAATGTGTTGCTTGATGGGACATTTATAGG 1193
Query 1164 GAAATCTTGGGGGATAAGCTATAACGCGTATGCGATGGGAAGGATGGAGAGTATTTGGGG 1223
|||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1194 GAAATCTTGGAGGATAAGCTATAATGCGTATGCGATGGGGAGGATGGAGAGTATTTGGGG 1253
Query 1224 TAAAGATTGTGATCGGTTTGATCCCGAGAGGTGGATTAATGAAACAAATGGTGGTTTTAG 1283
|||||||| || |||||||||| |||||||||||| |||||||||||||| |||| ||
Sbjct 1254 GAAAGATTGCGAAAGGTTTGATCCTGAGAGGTGGATTGATGAAACAAATGGTTGTTT-AG 1312
Query 1284 AGGTGAGAATCCTTACAAGTTTCCTGCGTTTCACGCAGGACCAAGGATGTGTTTAGGGAA 1343
|||||||||||||| ||||||||||||||| | | ||| | || | | |
Sbjct 1313 AGGTGAGAATCCTTTTAAGTTTCCTGCGTTT-A-G--GGA--A----TG-G----G--A- 1354
Query 1344 GGAGATGGCTTATATTCAGATGAAATCAATAGTCGCTGCA-GTTTTAGAGCGGTTTGTGG 1402
|||||| ||||||||||||||| |||| ||||| | || |||||| |||||||||
Sbjct 1355 -----TGGCTTCTATTCAGATGAAATCGATAGACGCTG-ATGTGTTAGAGAGGTTTGTGG 1408
Query 1403 TTGAGGTTCCGGGGAAGAAGGAGCGTCCTGAGATTCTATTGTC-AGTGACACTTAGAATC 1461
|||| | ||| ||||||||||||| |||||| ||| ||||||| | | |||||||||||
Sbjct 1409 TTGAAGCTCCAGGGAAGAAGGAGCATCCTGATATTTTATTGTCGATT-ACACTTAGAATG 1467
Query 1462 AGAGG-AGGTTTGTTGGTGAGGGTACAAGAGAGATC 1496
| ||| |||||| || ||||||||||||||||||||
Sbjct 1468 A-AGGGAGGTTTCTTTGTGAGGGTACAAGAGAGATC 1502
Score = 353 bits (191), Expect = 2e-96
Identities = 260/292 (89%), Gaps = 9/292 (3%)
Strand=Plus/Plus
Query 457 AGGCTTGTTCCGGTGTTAGCAGAAGCTGCAACCACCGGAAAATTGATAGATCTTCAAGAC 516
|||||||||| |||||| | ||||||||| ||||||||||||||||||||| ||||||||
Sbjct 548 AGGCTTGTTCGGGTGTTTGAAGAAGCTGCGACCACCGGAAAATTGATAGATATTCAAGAC 607
Query 517 ATATTGGAGCGATTCGCGTTTGATAACATCTGCAAATTAGCCTTCAACGTTGATTCAGCT 576
||||||||| |||| ||||||||||| || |||||| ||||||| |||||| |||||
Sbjct 608 ATATTGGAGAGATTTGCGTTTGATAATATTTGCAAAATAGCCTTTAACGTTAATTCA--- 664
Query 577 TGTCTCGGTGACGACGGAGCCGCCGGTGTAAACTTCATGCAG-GCCTTT-GAAACGGCGG 634
| | | ||||||||| |||| ||||||||||||||||||| | | |||| ||||||| ||
Sbjct 665 TAT-T-GGTGACGACAGAGCTGCCGGTGTAAACTTCATGC-GTG-CTTTCGAAACGGTGG 720
Query 635 CGACGATCATCTCGCAACGGTTTCAGTCTGTGGTTTCGTATTCATGGAAGATTAAAAAGA 694
|||||||||| || ||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 721 CGACGATCATATCACAATGGTTTCAGTCTGTGGTTTCGTATTTATGGAAGATTAAAAAGA 780
Query 695 AACTTAACATTGGATCAGAGAAAGTTCTGAGAGAATCAATCGTGACCGTTCA 746
||||||||||||||||||||| |||| ||||||||| |||||||||||||||
Sbjct 781 AACTTAACATTGGATCAGAGAGAGTTTTGAGAGAATTAATCGTGACCGTTCA 832
Score = 139 bits (75), Expect = 7e-32
Identities = 99/110 (90%), Gaps = 3/110 (3%)
Strand=Plus/Plus
Query 343 TTTAACTCCGATGGTGAGATGTGGTGGAAACAGAGGAAGACTG-CGAGTTATGAATTCAG 401
||||| ||||| ||| |||| |||||||||||||||||||| | ||||||||||||||||
Sbjct 386 TTTAA-TCCGACGGTAAGATATGGTGGAAACAGAGGAAGAC-GACGAGTTATGAATTCAG 443
Query 402 TACTAAATCTCTCCGTGACTTTGTTATGAGCAACGTCACCGTCGAAATCA 451
|||||||||||||| ||| ||||| ||||||||||||||||| ||| |||
Sbjct 444 TACTAAATCTCTCCATGAATTTGTCATGAGCAACGTCACCGTTGAATTCA 493
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73995603330
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5