BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg324178
Length=1899
Score E
Sequences producing significant alignments: (Bits) Value
AT3G56660.1 | Symbols: BZIP49 | basic region/leucine zipper mot... 2039 0.0
AT2G40950.1 | Symbols: BZIP17 | Basic-leucine zipper (bZIP) tra... 440 2e-122
> AT3G56660.1 | Symbols: BZIP49 | basic region/leucine zipper motif
protein 49 | chr3:20986217-20988213 REVERSE LENGTH=1863
Length=1863
Score = 2039 bits (1104), Expect = 0.0
Identities = 1678/1937 (87%), Gaps = 112/1937 (6%)
Strand=Plus/Plus
Query 1 ATGGCGGAACCTGTTTTGGAGGACACTTATCTTACCTTCTCTTCCGATTTCGATTCCATC 60
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 1 ATGGCGGAACCAGTTTTGGAGGACACTTATCTTACTTTCTCTTCCGATTTCGATTACATC 60
Query 61 ACGATCCCTCCTTCTTCGTTTGACAATTTCTGCAATTCTAGCTCCGATCAAGTTGGGAAC 120
||||| |||||||| | ||||| |||||||||||||||| ||| ||||||||| |||||
Sbjct 61 GCGATCGCTCCTTCTCCCTTTGATAATTTCTGCAATTCTAACTCTGATCAAGTTCGGAAC 120
Query 121 TCGATCTCTGATCTGAGGTTTTTGATCGATGACGACGACGGGGACGGAGACTTCCAGTTT 180
|||||||||||||||||||||||||| | |||||| ||| || ||| |
Sbjct 121 TCGATCTCTGATCTGAGGTTTTTGAT---T---GACGAC---GAC---GA----CAG--T 162
Query 181 ACTTCAGAAGACGATCTCTACTTCCCCCCTAAGAACGAATCTTTC-GCCATTCCTGTTGA 239
||| ||||||||||||||||| || |||||||||| ||| | ||||||| |||
Sbjct 163 --TTC----GACGATCTCTACTTCCCTTCTGAGAACGAATCGTTCTG-CATTCCTCCTGA 215
Query 240 CGCT------CGAGAAATGTCCGGTGATTTTACGCCGGCGTC-GGAACTTTCAGGCGATT 292
|||| ||||||||||| ||||| |||||||||||||| |||| ||||||||||||
Sbjct 216 CGCTACGAAACGAGAAATGTCTGGTGACTTTACGCCGGCGTCGGGAA-TTTCAGGCGATT 274
Query 293 GTGTTAAAGAAGAAACGGAGAAGAATACCAATGGCGTGTTAATATCTACTCCAATCTACT 352
||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||| || ||
Sbjct 275 GTGTTAACGAAGACACGGAGAAGAATACGAATGGCGTGTTAATATCTACTTCAAGCTGCT 334
Query 353 GCGATAGGGAATCGCCTGGGGATTCTGATCGT-TCCGGTACTACTCAGAGCTTGAGTTTA 411
| |||| ||||| ||| |||||||||| | |||||||||| |||||||||||||||
Sbjct 335 ACAATAGAGAATCACCTACGGATTCTGAT-TTCTCCGGTACTAGTCAGAGCTTGAGTTTT 393
Query 412 TCGGCACAAGAGTCTGCGAAGAGGAAAAAAGAGATTCAAGAAGATTCACGTGAAGAATCT 471
|||| ||||| ||||| |||||||||| ||||||| ||||||||| | ||| |
Sbjct 394 TCGGGGCAAGATTCTGCCAAGAGGAAAACAGAGATTGAAGAAGATT--C---AAG---C- 444
Query 472 AGGAACAATAAGTACAGGACATTGGATCAAGATGGCTTTGCAAGTGTTGTCACAGGTGGT 531
| || || | ||||| ||||| | ||||||| |||||||||||| | | || ||||
Sbjct 445 --G-AC--GAA-TCCAGGAGATTGGGTAAAGATGGTTTTGCAAGTGTTATAAAAGTTGGT 498
Query 532 GATGAAGAAGATGATGAGAAGAAG-A-AA-GTGAGACTGA-TTAGAAACCGTGAAAGTGC 587
| |||||||||||||||||||||| | || |||||||| | |||||||||||||||||||
Sbjct 499 GGTGAAGAAGATGATGAGAAGAAGAAGAACGTGAGACT-AGTTAGAAACCGTGAAAGTGC 557
Query 588 TCACCTTTCAAGACAGAGGAAGAAACATTACGTGGAGGAGCTTGAAGATAAAGTTAAGAA 647
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 558 TCACCTTTCAAGACAGAGGAAGAAGCATTACGTGGAGGAGCTTGAAGATAAAGTTAAGAA 617
Query 648 CATGCACTCCACTATATCGGAATTGAGCAGTAAGATGTCTTATTTCATGGCTGAGAATGT 707
||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 618 TATGCATTCCACTATATCGGAATTGAGCAGTAAGATGTCTTATTTCGTGGCTGAGAATGT 677
Query 708 TACTTTGAGGCAGCAGATGGGCCCCAGAAATGGCATGTGTCAACCATCGATGTATCCACC 767
||||||||||| |||||||| || || || | | || | | | || | |||||
Sbjct 678 CACTTTGAGGCAACAGATGGG---CA-CAA-GG--T-TCTC-A--A--G-TGGA-CCACC 722
Query 768 GTTGGCTCCAATGGCTTATCCGTGGATACCGTATCCGGCTTATATGGTTAAACCGCAAGG 827
| ||| |||||| | |||||| ||||| | |||||||||||||||||||||||| |||||
Sbjct 723 GATGGTTCCAATTGTTTATCCATGGATGCAGTATCCGGCTTATATGGTTAAACCACAAGG 782
Query 828 TTCTCAAGTGCCTTTACTTCCTATTCCTCGGTTGAAACCACAACACTCTGTGGCTAAGGT 887
|||||||||| |||| |||||||||||||||||||||||| |||| ||||| ||||||||
Sbjct 783 TTCTCAAGTGGCTTTGCTTCCTATTCCTCGGTTGAAACCAAAACATTCTGTTGCTAAGGT 842
Query 888 GAAGAAGTTCAAGAAGGTTGCTAGTGTTAGTGTTCTTGGTCTTCTGTTTTGTCTATTTCT 947
||||||||||||||||||||||||| |||||||| ||||| |||||||||| || |
Sbjct 843 GAAGAAGTTCAAGAAGGTTGCTAGTTTTAGTGTTTTTGGTTTTCTGTTTTG--TA----T 896
Query 948 GTTTTGTGCATTGGCTCCCATT-GTGAACATTAGCTATGGCGAGTATAAG--T--CTA-- 1000
||||| || |||| | |||| ||||||||||||||||| ||||||||| | |||
Sbjct 897 GTTTT-TG-TTTGG-T-GCATTGGTGAACATTAGCTATGGGGAGTATAAGTCTAACTATG 952
Query 1001 --ACT-ACGGGGTTTATGATCAGTCTAGAGGAAGAGTTTTGGTTGTTGATAGTAATAAAG 1057
||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 953 TTACTGACGGGGTTTATGATCAGTCTAGAGGAAGAGTTTTGGTTGTTGATAGTAGTAGAG 1012
Query 1058 CACATTGTGGGGGAGGTTCTGATCAAGGAGTGAGAAGAAACGTATCTGAGACAGAGAACT 1117
|||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| |
Sbjct 1013 TACATTGTGGGGGAGATTCTGATCAAGGAGTGGGAAGAAACGTATCTGAAACAGAGAATT 1072
Query 1118 TGGGGCCTCCTCGAAATAGTAGTGAACCTCTAGTTGCATCGCTATTTGTCCCGAGGAATG 1177
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1073 TGGGGCCTCCTCGAAATAGTAGTGAACCTCTAGTTGCATCGCTATTTGTTCCGAGGAATG 1132
Query 1178 AAAAGCTTGTCAAGATCGATGGAAATTTGATTATTCATTCTGTTTTGGCGAGCGAGAAAG 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1133 AAAAGCTTGTCAAGATCGATGGAAATTTGATTATTCATTCTGTTTTGGCGAGCGAGAAAG 1192
Query 1238 CCAGGGATTCTGAAACAAAGAACAAAGAAGGCAAAAGCGGTGTAGCAACTACTACTAAAG 1297
||||||||||||||||||||||| ||||||| ||||| | | |||||||||| ||||||
Sbjct 1193 CCAGGGATTCTGAAACAAAGAACGAAGAAGGGAAAAGTGTTCTAGCAACTACAACTAAAA 1252
Query 1298 GGATTATTTCTCCTGCAATGCCTTTACCTGACTCCACAAG-----G-ACCATGGATATGT 1351
|||| |||||||| |||||||||||||||||||||| | |||| |||| |||
Sbjct 1253 CT-TTAT--CTCCTGCATTGCCTTTACCTGACTCCACAAGCCCAAGGACCAGGGATGTGT 1309
Query 1352 CTAAGCACCTCTATAGCGAAACGCCGAAAGCCCTGTCATCTTCTGGTTCTGATGATGCTT 1411
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1310 CTAAGCACCTCTATAGCGAAACGGGGAAAGGCCTGTCATCTTCTGGTTCTGATGATGCTT 1369
Query 1412 TGAAAGAACAACTCAAATTAACAACAGCCAATGGTCAAATGCAGCAATGGTTTCGTGAAG 1471
||| || |||||||||| ||||| |||||||||| ||||||||||||||||||||||||
Sbjct 1370 CGAACGACCAACTCAAATCAACAATAGCCAATGGTAAAATGCAGCAATGGTTTCGTGAAG 1429
Query 1472 GTGTTGCAGGGCCAATGTTCAGTTCGGGGATGTGCACCGAAGTGTTTCAGTTTGATGTCT 1531
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1430 GTGTTGCAGGGCCAATGTTCAGTTCGGGGATGTGCACTGAAGTGTTTCAGTTTGATGTCT 1489
Query 1532 CCTCAACCTCAGGATCCATCATTCCTGCTTCCCCACCCACTGAACAATCTAAGAACAC-- 1589
|||||| ||||||| |||||||||||||||| |||| ||| |||| | |||||||||
Sbjct 1490 CCTCAAACTCAGGAGCCATCATTCCTGCTTCTCCACATACTCAACAGTGTAAGAACACCA 1549
Query 1590 -TGATACTCACAAGGGGAAAAAGAACAGAAGAATCCTCCA-TGGTGGTCTTTCAGCATCT 1647
|||||| || ||||||||||||||||||||||||||| | |||||||||| | | ||||
Sbjct 1550 GTGATACACAAAAGGGGAAAAAGAACAGAAGAATCCTC-AGTGGTGGTCTTCCGGTATCT 1608
Query 1648 GATTTTAATCTTACCAAAGA---TCATAAGTGCTCTAGCAAAGAGAACTTCCAGGACACC 1704
|| ||||||||||||||||| |||||| ||||||||||||| || |||| ||| |||
Sbjct 1609 GACTTTAATCTTACCAAAGAAGATCATAACAGCTCTAGCAAAGACAAGTTCCGGGAAACC 1668
Query 1705 AAGCCTG-CCTCATCAATGGTTGTATCTGTGCTTGTTGATCCCAGAGAAGGCGGTGATGG 1763
||||| | || |||||||||| || |||||||||||||||||||||||||||||| ||||
Sbjct 1669 AAGCCAGGCC-CATCAATGGTAGTGTCTGTGCTTGTTGATCCCAGAGAAGGCGGTAATGG 1727
Query 1764 AGATATAGATGGGATGATGGGAGGAACAAAATCACTGTCTCC-AGTTTTCATAGTCTTGC 1822
||| || |||||||||||||||||||||||| ||| ||| || ||||||||||||| |||
Sbjct 1728 AGACATCGATGGGATGATGGGAGGAACAAAACCACAGTC-CCGAGTTTTCATAGTCGTGC 1786
Query 1823 TTGTGGACGATGTGAAGTATGTAACATACTCCTGCATTCTTCCACGGCCAGAAGTCCCTC 1882
||||||||| |||||||||| |||||||||| ||| |||||||||| ||||| |||||||
Sbjct 1787 TTGTGGACGGTGTGAAGTATATAACATACTCTTGCGTTCTTCCACGACCAGATGTCCCTC 1846
Query 1883 ATCTCGTGAGCACTTGA 1899
||||| ||| || ||||
Sbjct 1847 ATCTCATGACCAGTTGA 1863
> AT2G40950.1 | Symbols: BZIP17 | Basic-leucine zipper (bZIP) transcription
factor family protein | chr2:17087620-17090424
REVERSE LENGTH=2467
Length=2467
Score = 440 bits (238), Expect = 2e-122
Identities = 687/890 (77%), Gaps = 85/890 (10%)
Strand=Plus/Plus
Query 1060 CATTGTGGGGGAGGTTCTGATCAAGGAG-TGA-GAAGAAACGTATCTG-AGACAGAGAAC 1116
||| ||||| ||| |||||||| ||||| | | ||| ||| |||||| | |||||| |
Sbjct 1410 CATCGTGGGAGAGATTCTGATCGAGGAGCT-AGGAA-AAATATATCTGCA-ACAGAG-AG 1465
Query 1117 TTGGGGC-CTCCTCGAAATAGTAGTGAACCTCTAGTTGCATCGCTATTTGTCCCGAGGAA 1175
|| | | ||||| ||||| ||||||| |||||||||||||| || ||||| ||||||||
Sbjct 1466 TTCTGTCACTCCTGGAAATGGTAGTGAGCCTCTAGTTGCATCACTCTTTGTTCCGAGGAA 1525
Query 1176 TGAAAAGCTTGTCAAGATCGATGGAAATTTGATTATTC-ATTCTGTTTTGGCGAGCGAGA 1234
||| |||||||| ||||| ||||| |||||||||| || ||||| | |||||||| ||||
Sbjct 1526 TGACAAGCTTGTGAAGATAGATGGGAATTTGATTA-TCAATTCTATATTGGCGAGTGAGA 1584
Query 1235 AAGCCAG-GGATTC-TGAAA--C-AAAGAA-CAAA-GA-AGGCAAAAGCGGTGTAGCAAC 1286
||||| | || ||| |||| | ||| |||| || ||| ||||| | | | |
Sbjct 1585 AAGCC-GTGGCTTCGAGAAAGGCTTCTGAATCAAAGGAGAGG--AAAGCTGACTTG--A- 1638
Query 1287 T-A-CTACTAAAGGGATTATTTCTCCTGCAATGCCTTTACCTGAC-TCCACAAGGACCA- 1342
| | || ||||| ||||| | | |||||| ||||| |||||||| | ||||| ||
Sbjct 1639 TGATCT-CTAAA--GATTA-TACCCCTGCACTGCCTCTACCTGACGT-GGGAAGGA-CAG 1692
Query 1343 TGG-ATATGTCTAAGCACCTCTATAG--CGAAACGCCG-AAAGC--CCTG-TC-ATCTTC 1394
|| || || ||||||| |||||||| | || || | ||| | | || ||| ||
Sbjct 1693 AGGAAT-TGGCTAAGCATCTCTATAGATC-TAAGGCTGAAAAACAGAAAGCTCTATCCTC 1750
Query 1395 TGGTTCTGATGATGCTTTGAAAGAACAACTCAAATTAACAA-CAGCCAATGGTCAAATGC 1453
||| |||| |||| || ||||||| ||| ||||| || || ||||||| ||| ||||||
Sbjct 1751 TGGCTCTGCTGATACTCTGAAAGACCAAGTCAAAACAA-AAGCAGCCAACGGTGAAATGC 1809
Query 1454 AGCAATGGTTTCGTGAAGGTGTTGCAGGGCCAATGTTCAGTTCGGGGATGTGCACCGAAG 1513
|||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||| ||||
Sbjct 1810 AGCAATGGTTCCGTGAAGGTGTTGCAGGTCCCATGTTTAGTTCAGGGATGTGCACTGAAG 1869
Query 1514 TGTTTCAGTTTGATGTCTCCTCAACCTCAGGATCCATCATTCCTGC--TTCCCCAC--C- 1568
|||||||||||||||| ||||||||||| ||| ||||||||||||| | || || |
Sbjct 1870 TGTTTCAGTTTGATGTATCCTCAACCTCTGGAGCCATCATTCCTGCAGCTACCAACGTCT 1929
Query 1569 C-ACTGAACAATCTAAG-A-A-CACTGATACTCACAAGGGGAAAAAGAACAGAAGAATCC 1624
| ||||||| |||| | | ||| || || ||||| | || |||||||||||||||
Sbjct 1930 CTGCTGAACACGGTAAGAACACCACAGACACACACAA---GCAACAGAACAGAAGAATCC 1986
Query 1625 TCCATGGTGGT--C-TT----T--CAGCATCTGATTTTAATCTTACCAAAGATCATAAGT 1675
| | |||| | | || | ||| ||| |||||||| || || ||||| | |
Sbjct 1987 TTCGTGGTCTTCCCATTCCACTCCCAGGATCAGATTTTAACCTCACGAAAGAGC---A-- 2041
Query 1676 GCTC-TAGCAAAGAGAACT-TCCAGGACACCAAGCCTGCCTCATCAATGGTTGTATCTGT 1733
| | || ||| || | | | | || | ||||||||| ||||||||||||||||||||
Sbjct 2042 -C-CAAAG-AAACAGCAGTAGCAAAGAAATCAAGCCTGCTTCATCAATGGTTGTATCTGT 2098
Query 1734 GCTTGTTGATCCCAGAGAAGGCGGTGATGGAGATATAGATGGGATGAT-GGGAGGAACAA 1792
||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||| |||
Sbjct 2099 GCTTGTTGATCCCAGAGAAGGAGGTGATGGAGATATAGATGGGATGATTGGG-GGACCAA 2157
Query 1793 AATCACTGTCTCCAGTTTTCATAGTCTTGCTTGTGGACGATGTG-AA-GTATGTAACATA 1850
|||||||||||| |||||| ||||| ||||| ||||| | ||| || ||||||||||||
Sbjct 2158 AATCACTGTCTCGAGTTTTTGTAGTCGTGCTTCTGGAC-A-GTGCAAAGTATGTAACATA 2215
Query 1851 CTCCTGCATTCTTCCACGGCCAGAAG-TCCCTCATCTCGTGAGCACTTGA 1899
|||||| | || || || ||| || ||| |||||| |||| |||||||
Sbjct 2216 CTCCTGTGTCCTACCTCGATCAGGAGCTCC-TCATCTTGTGACCACTTGA 2264
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94025620785
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5