BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg324310 Length=1308 Score E Sequences producing significant alignments: (Bits) Value AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:21564... 1386 0.0 AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:21562... 385 7e-106 AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:21589... 303 2e-81 AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domai... 206 6e-52 AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595... 183 3e-45 AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597... 156 6e-37 AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:19769... 148 1e-34 AT1G31370.1 | Symbols: | Ubiquitin-specific protease family C1... 113 4e-24 AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243... 95.3 1e-18 AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240... 86.1 8e-16 AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245... 76.8 5e-13 > AT3G58220.2 | Symbols: | TRAF-like family protein | chr3:21564450-21566482 REVERSE LENGTH=1636 Length=1636 Score = 1386 bits (750), Expect = 0.0 Identities = 1181/1376 (86%), Gaps = 82/1376 (6%) Strand=Plus/Plus Query 1 ATGGGGATAATACGGAGTCCATTTGATAAGAACAAGTTCACTTGGGTAATCAAGGATTTC 60 ||||||| |||| |||||||| ||| ||||||| |||||| ||||||||||||||||||| Sbjct 48 ATGGGGAGAATAGGGAGTCCACTTGGTAAGAACGAGTTCAGTTGGGTAATCAAGGATTTC 107 Query 61 TCCTCTTTGCGATCTGA-GATGATTTATTCTGATGAATTTGTTCTCGGTGGCTGCAAATG 119 ||||||||| || ||| | ||||||||||| |||||||| |||||||||||||||| Sbjct 108 TCCTCTTTGGGA-GTGAGGGCAATTTATTCTGACGAATTTGTGATCGGTGGCTGCAAATG 166 Query 120 GCGTCTTATGGCCTATCCCGA-CGGAGATAGGATTAAAAAGTATATGTCTTTGTATGTGG 178 ||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct 167 GCGTCTTATAGCCTATCCC-ATGGGAAATAGGATTAAAAAGTATATGTCTTTGTATGTGG 225 Query 179 AAGTTGCTGATTCTAAACATTTGCCTTCTGGATGGAGTATACACACAGAATTGCGCATGG 238 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 226 AAGTTGCTGATTCTAAACATTTGCCTTCTGGATGGAGTATAAACACAGAATTGCGCATGG 285 Query 239 AAGTAGTAAATCACGATTTGTATAAGCCCTCCCAACAGAAATATAGAAAAAATTTTTGGT 298 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 286 AAGTTGTAAATCACAATTTGTATAAGCCCTCCCAACAGAAATATAGAAAAAATTTGTGGT 345 Query 299 TTGATAAGAAGACTCCTGCCTGGGGTTATAAAACCATGATTCCACATTCTAAACTTTGTG 358 ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct 346 TTGATCAGAAGACTCCTTCCTGGGGTTATAAAACCATGATTCGTCATTCTAAACTTTCTG 405 Query 359 GTGAAGAAGGGTTTTTGGTAAATGGAGAAGTCACAATTGTAGTCCAGATAGACGTTTATA 418 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 406 GTGAAGAAGGGTTTTTGGTAAGTGGAGAAGTCACAATTGTAGTCAAGATAGACGTTTATA 465 Query 419 GAGTTATTGGCAAAGTAGCTGCAATAGAGA--T-T---------TCTGAAGAGGGATCT- 465 ||||| |||||||||||||||||||||||| | | ||| ||||||||| | Sbjct 466 GAGTTTTTGGCAAAGTAGCTGCAATAGAGATTTCTGAAGAGGGATCTAAAGAGGGATATG 525 Query 466 AA-A-G-----G--G-GG-ATATGAATATGAATCTGAAGAGGAATCTAAA-AAGAAATCT 513 || | | | | || |||| || | ||||||||||||| || |||| | | ||||| Sbjct 526 AATATGAATCTGAAGAGGTATATAAAAAGGAATCTGAAGAGGGATATAAATATG-AATCT 584 Query 514 GTAGAGGGA-T-C-----TA-A---AT-G-GGGATATGAATATGAATCTGAAGAGGAATC 560 | ||| ||| | | | | || | | ||| ||||||||||||||||| |||||| Sbjct 585 GAAGA-GGATTACGAAAAGAGACCTATAGAGAGATTTGAATATGAATCTGAAGCGGAATC 643 Query 561 TAAAAACGAAT-CTGTAGAGGGATCTA-ATGGGGGATATGAATATGAATCTGAAGAGGAA 618 |||||| || | | | |||| || ||| | ||||||| |||||||||||||||| || | Sbjct 644 TAAAAAGGACTAC-GAAGAGAGAACTAGA-GGGGGATTTGAATATGAATCTGAACCGGTA 701 Query 619 TCTAAAAAGAAAT-CTGTAGAGGGATCTAAATG-GGGATATGAATATGAATCTGAAGAGG 676 ||||||||| | | | | |||| || ||| | | | | | ||||||||||||||||| || Sbjct 702 TCTAAAAAGGATTAC-GAAGAGAGACCTAGA-GAGAGTTTTGAATATGAATCTGAAGCGG 759 Query 677 AATCTAAAAAGGATTCTGAAGAGGGATATA-A-AG-G----G---A-G-A--T----ATG 718 |||||||||||||||| |||||||||| || | || | | | | | | | | Sbjct 760 AATCTAAAAAGGATTCCGAAGAGGGATCTAGAGAGAGATATGAATATGAATCTGAAGAGG 819 Query 719 AATCTAAAAAGGATTCTGA-AAGTGATTGTGGAGAGGAATCTGAAAAGGGTTCTGAAGAG 777 ||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||| Sbjct 820 AATCTAAAAAGGATTCTGAGAA-TGATTGTGGAGAGGAATCTGAAAAGGATTCTGAAGAG 878 Query 778 GGAAGCAGGCCTCTTAAAAAGATTAAGCGAAATGATGATGGTGTGAAGTCTAATGATTCA 837 |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 879 GGAAGCAGACCTCTTAAAAAGATTAAGAGGAATGATGATGGTGTGAAGTCTAATGATTCA 938 Query 838 GTCAACAAGACTCAACAACTGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCT 897 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 939 GTCAACAAGACTCAACAAGTGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCT 998 Query 898 TCACAGGTGAAATTTGTGAGCCGTATTTTTGAAAAATACCCAGACATTGCAGTAGGATTC 957 |||||||||| | |||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 999 TCACAGGTGACACTTGTGAGCCGTATTTTAAAAAAATACCCAGACATTGCATTAGGATTC 1058 Query 958 CATGCAAAGAACCAACATCTTAAGACAGCATGCATGAATGTCCTCCTCAGCCTAATCGAG 1017 |||||||||||| |||||| | |||||||||||||||||||||| |||||||||||||| Sbjct 1059 AATGCAAAGAACCGACATCTGAGGACAGCATGCATGAATGTCCTCATCAGCCTAATCGAG 1118 Query 1018 ACACTGTGTCAGTCACCTCAGGAGCTCTCAAATGAAGATATGG-TGGAAGCAGACAATGC 1076 |||||||| |||||||| |||||||||||| | |||||||||| || ||||||||||||| Sbjct 1119 ACACTGTGCCAGTCACCACAGGAGCTCTCAGACGAAGATATGGATG-AAGCAGACAATGC 1177 Query 1077 TCTAACATATGTGAAAGATGCGGGCTTTAAGGTGGATTGGTTGGAGATGAAGCTGGAGGA 1136 ||| ||| ||| ||||||| ||||||||||||||||||||||| | ||||||| |||| Sbjct 1178 ACTAGTATACGTGCAAGATGCAGGCTTTAAGGTGGATTGGTTGGACAAGAAGCTGAAGGA 1237 Query 1137 AGTAAAAGAAAAGAAGGTGGTAGAGCAGACTGGTGAGACTCGGATTCAAGAGTTAGAGGA 1196 ||||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||||| Sbjct 1238 AGTAAAAGAAAAGAAAGTGGTAGAGCAGACTGGTAAGACCCGGATTCAAGAATTAGAGGA 1297 Query 1197 GGACATGTTGAAC-A-TT-ATGT-GTAAGTGGTCAGACATGAAAGCTGTACTGGAGAAGG 1252 ||| || | ||| | || | | | ||||| | ||||| | ||||| | ||||| || | Sbjct 1298 GGA-AT-T-GAAGGAATTTAAGCAG-AAGTGCTTAGACAGGGAAGCTCTGCTGGAAAAAG 1353 Query 1253 AGAAGACAAAAGTGTTGGCAGCTAGAGCTCCTCTAACATTGGATGATTTTGTCTGA 1308 ||||| ||||||||||||| || ||||| ||||||| |||||||||||||||||| Sbjct 1354 AGAAGGCAAAAGTGTTGGCTGCCCGAGCTTCTCTAACTTTGGATGATTTTGTCTGA 1409 Score = 219 bits (118), Expect = 8e-56 Identities = 242/300 (81%), Gaps = 16/300 (5%) Strand=Plus/Plus Query 444 AGA-GATTTCTGAAGAGGGATCTAAAGGGGGATATGAATATGAATCTGAAGAGGAATCTA 502 ||| |||| | ||| || || ||| || | ||| ||||||||||||||||| |||||||| Sbjct 587 AGAGGATTAC-GAAAAGAGACCTATAGAGAGATTTGAATATGAATCTGAAGCGGAATCTA 645 Query 503 AAAAGAAAT-CTGTAGAGGGATCTAAATGGGGATATGAATATGAATCTGAAGAGGAATCT 561 ||||| | | | | |||| || ||| | |||||| |||||||||||||||| || |||| Sbjct 646 AAAAGGACTAC-GAAGAGAGAACTAGAGGGGGATTTGAATATGAATCTGAACCGGTATCT 704 Query 562 AAAAACGAAT-CTGTAGAGGGATCTA-ATGGGGGATATGAATATGAATCTGAAGAGGAAT 619 ||||| || | | | |||| || ||| | | | | | ||||||||||||||||| ||||| Sbjct 705 AAAAAGGATTAC-GAAGAGAGACCTAGA-GAGAGTTTTGAATATGAATCTGAAGCGGAAT 762 Query 620 CTAAAAAGAAATCTGTAGAGGGATCTAAATG-GGGATATGAATATGAATCTGAAGAGGAA 678 |||||||| | || | ||||||||||| | | | |||||||||||||||||||||||||| Sbjct 763 CTAAAAAGGATTCCGAAGAGGGATCTAGA-GAGAGATATGAATATGAATCTGAAGAGGAA 821 Query 679 TCTAAAAAGGATTCTGAAGAGGGATATAAAGGGAGATATGAATCTAAAAAGGATTCTGAA 738 ||||||||||||||||| || ||| | || ||| |||||| |||||||||||||| Sbjct 822 TCTAAAAAGGATTCTGA-GAATGAT-TGT-GG-AGAG--GAATCTGAAAAGGATTCTGAA 875 Score = 163 bits (88), Expect = 4e-39 Identities = 156/188 (83%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 454 GAAGAGGGATCTAAAGGGGGATATGAATATGAATCTGAAGAGGAATCTAAAAAGAAAT-C 512 |||||| || ||| |||||||| |||||||||||||||| || |||||||||| | | | Sbjct 657 GAAGAGAGAACTAGAGGGGGATTTGAATATGAATCTGAACCGGTATCTAAAAAGGATTAC 716 Query 513 TGTAGAGGGATCTAAATG-GGGATATGAATATGAATCTGAAGAGGAATCTAAAAACGAAT 571 | |||| || ||| | | | | | ||||||||||||||||| |||||||||||| || | Sbjct 717 -GAAGAGAGACCTAGA-GAGAGTTTTGAATATGAATCTGAAGCGGAATCTAAAAAGGATT 774 Query 572 CTGTAGAGGGATCTA-ATGGGGGATATGAATATGAATCTGAAGAGGAATCTAAAAAGAAA 630 | | ||||||||||| | | | ||||||||||||||||||||||||||||||||||| | Sbjct 775 CCGAAGAGGGATCTAGA-GAGAGATATGAATATGAATCTGAAGAGGAATCTAAAAAGGAT 833 Query 631 TCTGTAGA 638 |||| ||| Sbjct 834 TCTG-AGA 840 Score = 130 bits (70), Expect = 4e-29 Identities = 141/174 (81%), Gaps = 9/174 (5%) Strand=Plus/Plus Query 447 GATTTCTGAAGAGGGATCTAAAGGGGGATATGAATATGAATCTGAAGAGGAATCTAAAAA 506 |||| | |||||| || ||| || | | | ||||||||||||||||| |||||||||||| Sbjct 711 GATTAC-GAAGAGAGACCTAGAGAGAGTTTTGAATATGAATCTGAAGCGGAATCTAAAAA 769 Query 507 GAAATCTGTAGAGGGATCTAAATG-GGGATATGAATATGAATCTGAAGAGGAATCTAAAA 565 | | || | ||||||||||| | | | ||||||||||||||||||||||||||||||||| Sbjct 770 GGATTCCGAAGAGGGATCTAGA-GAGAGATATGAATATGAATCTGAAGAGGAATCTAAAA 828 Query 566 ACGAATCTGTAGAGGGATCTAATGG-G-GGA-TATGAATATGAATCTGAAGAGG 616 | || |||| ||| ||| | ||| | ||| | |||| | || |||||||||| Sbjct 829 AGGATTCTG-AGAATGAT-TG-TGGAGAGGAATCTGAAAAGGATTCTGAAGAGG 879 Score = 87.9 bits (47), Expect = 2e-16 Identities = 62/69 (90%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 450 TTCTGAAGAGGGATCTAAAGGGGGATATGAATATGAATCTGAAGAGGAATCTAAAAAGAA 509 ||| ||||||||||||| || | ||||||||||||||||||||||||||||||||||| | Sbjct 773 TTCCGAAGAGGGATCTAGAGAGAGATATGAATATGAATCTGAAGAGGAATCTAAAAAGGA 832 Query 510 ATCTGTAGA 518 |||| ||| Sbjct 833 TTCTG-AGA 840 > AT3G58210.1 | Symbols: | TRAF-like family protein | chr3:21562442-21564067 REVERSE LENGTH=1196 Length=1196 Score = 385 bits (208), Expect = 7e-106 Identities = 421/521 (81%), Gaps = 25/521 (5%) Strand=Plus/Plus Query 793 AAAAAGATTAAGCG-AAATGATGATGGTGTGAAGTCTAATGA-TTCA-G-TCAACAAGAC 848 |||||| | ||| | | || ||||| |||| |||||||||| || | | ||||| |||| Sbjct 475 AAAAAGGTAAAG-GTAGATTATGATCATGTGGAGTCTAATGATTTGATGATCAACGAGAC 533 Query 849 TCAACAACTG-AAG-GAAAC-CATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGT 905 || || | | || | ||| |||||| ||||||| ||||||||||||||||| ||||| Sbjct 534 TC--CACCGGTTAGTG-AACTCATGGACGTCAATGGTTTTCAAGTTCTTCCTTCCCAGGT 590 Query 906 GAAATTTGTG-AGCCGTATTTTTGAAAAATACCCAGACATTGCAGTAGGA-TTCCATGCA 963 | | |||||| || ||||||||||||||| | |||||||||||| | || |||| | || Sbjct 591 GGATTTTGTGAAG-CGTATTTTTGAAAAACATCCAGACATTGCA-AAAGATTTCCGTCCA 648 Query 964 AAGAACCAACATCTTAAGACAGCATGCATGAATGTCCTCCTCAGCCTAATCGAGACACTG 1023 ||||||| |||||| | || ||||||||||||| || | |||||| |||| |||||| || Sbjct 649 AAGAACCCACATCTGAGGAAAGCATGCATGAATTTCTTGCTCAGCTTAATGGAGACATTG 708 Query 1024 TGTCAGTCACCTCAGGAGCTCTCAAATGAAGATATGGTGGAAGCAGACAATGCTCTAACA 1083 || || |||||||| |||| |||||||||||| | ||||||||||||||||| || ||| Sbjct 709 TGCCAACCACCTCAGAAGCTATCAAATGAAGATCTTGTGGAAGCAGACAATGCACTGACA 768 Query 1084 TATGTGAAAGATGCGGGCTTTAAGGTGGATTGGTTGGAGATGAAGCTGGAGGAAGTAAAA 1143 || ||||||| | |||| ||||| |||||||||||||||| ||||| |||||||| || Sbjct 769 TACGTGAAAGTTTCGGGGTTTAAAGTGGATTGGTTGGAGAAAAAGCTAGAGGAAGTGAA- 827 Query 1144 GAAAA-GAAGGTGGTAGAGCAGACTGGTGAGACTCGGATTCAAGAGTTAGAGGAGGACAT 1202 ||||| ||||| || ||| |||||||||||| |||| |||||||| |||||||||| || Sbjct 828 GAAAAAGAAGGAGGAAGAACAGACTGGTGAGGCTCGAATTCAAGAACTAGAGGAGGA-AT 886 Query 1203 GTTGAAC-A-TT-ATGT-GTAAGTGGTCAGACATGAAAGCTGTACTGGAGAAGGAGAAGA 1258 | ||| | || | | | ||||| | ||| | | ||||| | |||||||| || ||| Sbjct 887 -T-GAAGGAATTTAAGCAG-AAGTGCTTAGATAGGGAAGCTATGCTGGAGAAAGAAAAGG 943 Query 1259 CAAAAGTGTTGGCAGCTAGAGCTCCTCTAACATTGGATGAT 1299 |||| ||||| ||||||||||||||||||||||||||||| Sbjct 944 CAAAGGTGTTAACAGCTAGAGCTCCTCTAACATTGGATGAT 984 > AT3G58340.1 | Symbols: | TRAF-like family protein | chr3:21589071-21590401 REVERSE LENGTH=978 Length=978 Score = 303 bits (164), Expect = 2e-81 Identities = 275/328 (84%), Gaps = 10/328 (3%) Strand=Plus/Plus Query 848 CTCAACAACTGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGT-G 906 |||||||| ||||||||| ||| ||| | ||||||||||||||||||||||||||||| | Sbjct 539 CTCAACAAGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAG 598 Query 907 AAATTTGTGAGCCGTATTTTTGAAAAATACCCAGACATTGCAGTAGGATTCCATGCAAAG 966 || | |||||| ||||||||| ||||| | ||||||||||||||||||||||| | |||| Sbjct 599 AA-TCTGTGAGACGTATTTTTAAAAAACATCCAGACATTGCAGTAGGATTCCAAGTAAAG 657 Query 967 AACCAACATCTTAAGACAGCATGCATGAATGTCCTCCTCAGCCTAATCGAGAC-ACTGTG 1025 ||||||||||| | || | ||| ||||||| |||| ||| | |||| ||||| | |||| Sbjct 658 AACCAACATCTGAGGAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGA-TGTG 716 Query 1026 TCAGTCACCTC-AGGAGCTCTCAAATGAAGATATGGTGGAAGCAGACAATGC-TCTAACA 1083 || || | || |||||||||||||||||||| | ||||||| ||||| ||| | | ||| Sbjct 717 CCAATCTC-TCCAGGAGCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCGT-TGACA 774 Query 1084 TA-TGTGAAAGATGCGGGCTTTAAGGTGGATTGGTTGGAGATGAAGCTGGAGGAAGTAAA 1142 || | ||||||||||||| ||||||||||||||||| |||| ||||||||| | || || Sbjct 775 TACT-TGAAAGATGCGGGATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAA 833 Query 1143 AGAAAAGAAGGTGGTAGAGCAGACTGGT 1170 ||||||||||| | ||| ||| ||||| Sbjct 834 AGAAAAGAAGGAGAAAGAACAGTCTGGT 861 > AT3G44800.1 | Symbols: | Meprin and TRAF (MATH) homology domain-containing protein | chr3:16343333-16346027 FORWARD LENGTH=1695 Length=1695 Score = 206 bits (111), Expect = 6e-52 Identities = 311/403 (77%), Gaps = 32/403 (8%) Strand=Plus/Plus Query 871 GATATCAATGGGTTTCAAGTTCTTCCTTCACAGGTGAAATTTGTGA-GCCGTATTTTTGA 929 ||| |||||||||||||||||||||||||||||| | ||| ||||| || |||| || || Sbjct 523 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGC-GTATATTCGA 581 Query 930 AAAATACCCAGACATTGCAGTAG-GATTCC-ATGCAAAGAACCAACATCTTAAGA-CAGC 986 || | ||||| |||| ||| ||| | |||| | |||||||||||||| || || || | Sbjct 582 AAGACACCCATACATGGCATTAGAG-TTCCGA-GCAAAGAACCAACAG-TTGAGGGCATC 638 Query 987 ATGCATGAATGTCCTCCTCAGCCTAATCGAGACACTGTGTCAGTCACCT-CAGGAGCTCT 1045 ||| || ||||||||||||||||||||| |||| |||| ||||||| | || || | | Sbjct 639 ATGTATAAATGTCCTCCTCAGCCTAATCAAGACGTTGTGCCAGTCAC-TGCAAGATATTT 697 Query 1046 CAAATGAAGA--TATGGTGGAAGCAGA-CAATGCT-CTAACATATG-TG-AAAGATGCGG 1099 | | ||| || || || || |||| ||| | | ||||||| | || ||| || | | Sbjct 698 CCATTGATGACCTA-GGCCAAA-CAGAGCAA-G-TACTAACAT-TCCTGCAAA-ATTCTG 751 Query 1100 GCTTTAAGGTGGATTGGTTGGAGA-TGAAGCTGGAGGAAGTAAAAGAAAAGAAGGTGGTA 1158 | ||||||||||||||| ||||| | || |||||||||||||| ||||||||| | | Sbjct 752 GATTTAAGGTGGATTGGCTGGAGCGTAAA-CTGGAGGAAGTAAAGGAAAAGAAGATCCAA 810 Query 1159 GAGCAGACTGGTGAGACTCGGATTCAAG-AGTTAGAGGAGGACATGTTGAACATT-ATGT 1216 ||||| | |||| || ||||||| |||| | |||||||| ||| || | | || | | Sbjct 811 GAGCACATTGGTAAGTCTCGGATGCAAGGA-TTAGAGGAAGACCTGAAGGTC-TTCAAGA 868 Query 1217 -GTAAGTGGTCAGACAT-GAAAGCTGTACTGGAGAAGGAGAAG 1257 | ||||| || ||||| ||| ||| |||||||||| |||||| Sbjct 869 AG-AAGTGCTCTGACATAGAA-GCTCTACTGGAGAAAGAGAAG 909 > AT3G58370.1 | Symbols: | TRAF-like family protein | chr3:21595774-21596538 REVERSE LENGTH=660 Length=660 Score = 183 bits (99), Expect = 3e-45 Identities = 287/376 (76%), Gaps = 20/376 (5%) Strand=Plus/Plus Query 787 CCTCTTAAAAAGATTAAGCGAAATGATGATGGTGTGA-AGTCTAATGATTCAGTCAACAA 845 ||||| |||||||| |||| | ||||| ||| || | |||| |||||| ||||| | Sbjct 139 CCTCTGAAAAAGATAAAGCTAGATGATAATGATG-CAGTGTCTTTTGATTCTCTCAACGA 197 Query 846 GAC-TCAACAACTGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGG 904 ||| || || | | ||||||| ||| ||| |||||||||||||||||||||||||||||| Sbjct 198 GACTTC-ACCAGTAAAGGAAAGCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGG 256 Query 905 T-GAAATTTGTGA-GCCGTATTTTTGAAAAATACCCAGACATTGCAGT-AGGATTCCATG 961 | ||| | ||||| | |||| ||||||| | | |||||| ||||| | | ||||| | Sbjct 257 TAGAA-TCTGTGAAGT-GTATATTTGAAAGACATCCAGACTTTGCA-TCAAAATTCCGTC 313 Query 962 CAAAGAACCAACATCTT-AAGACAGCATGCATGAATGTCCTCCTCAGC-CTAATCGAGAC 1019 ||||||| | || ||| ||| || ||| ||||| ||||||||| || ||||| |||| Sbjct 314 CAAAGAATCGGCA-CTTGAAGTCAACATACATGACTGTCCTCCT-AGGACTAATTAAGAC 371 Query 1020 ACTGTGTCAGTCACCTCAGGAGCTCTCAAATGAAGATATGGTGGAAGCAGACAATGCTCT 1079 |||| |||| |||| |||||||| | | || ||| ||| |||||| | ||| | Sbjct 372 GTTGTGCCAGTTACCTGAGGAGCTCACTGACGATGATCTGGACGAAGCATCCGTTGCAGT 431 Query 1080 AACATATGTG-AAAGATGCG-GGCTTTAAGGT-GGATTGGTTGGAGATGAAGCTGGAGGA 1136 |||| ||| ||| ||| | ||||| ||| | |||||||||||||| |||||| | ||| Sbjct 432 GTCATACGTGGAAA-ATG-GTGGCTT-AAGATTGGATTGGTTGGAGAAGAAGCTTGCGGA 488 Query 1137 AGTAAAAGAAAAGAAG 1152 ||| || | ||||||| Sbjct 489 AGTTAAGGCAAAGAAG 504 > AT3G58380.1 | Symbols: | TRAF-like family protein | chr3:21597799-21599568 REVERSE LENGTH=1236 Length=1236 Score = 156 bits (84), Expect = 6e-37 Identities = 244/318 (77%), Gaps = 23/318 (7%) Strand=Plus/Plus Query 847 ACTC-AACA-ACTGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGG 904 |||| |||| ||| || ||| ||| ||| |||||||||||||||||||||||||||||| Sbjct 599 ACTCAAACAGACTCAA-CAAATCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGG 657 Query 905 T-GAAATTTGTGA-GCCGTATTTTTGAAAAATACCCAGACATTGCAGT-AGGATTCCATG 961 | ||| | ||||| || |||| ||||||| ||||||| |||||||| | || | ||| | Sbjct 658 TAGAA-TCTGTGAAGC-GTATATTTGAAATATACCCAAACATTGCA-TCAGAAGTCCCTT 714 Query 962 CAAAGAA-CCAACATCTTAAGACAGCATGCATGAATGTCCTCCTCAGCCTAATCGAGACA 1020 ||| ||| ||| ||| |||||| || ||||||||| |||||| | |||| || || Sbjct 715 CAATGAAACCATG-TCTGAAGACATTATACATGAATGTACTCCTCGGAATAATTGAAACG 773 Query 1021 CTGTGTCAG-TCACCT-CAGGAGCTCTCAAATGAA-GATATGG-TGGAAGCAGACAATGC 1076 ||||| || | ||| | ||||||||| || | ||| ||| || ||||| || ||| Sbjct 774 CTGTGCCAACTG-CCTGC-GGAGCTCTCTGAT-ACTGATCTGGATG-AAGCATCCATTGC 829 Query 1077 TCTAACATAT-GTGAAAGATGCG-GGCTTTAAGGTGGATTGGTTGGAGATGAAGCTGGAG 1134 | || | ||| | | | | |||||||| |||||||||||||||| |||||| || Sbjct 830 AGTTTTAT-TCGTGTCACAAG-GTGGCTTTAAAGTGGATTGGTTGGAGAAGAAGCTCAAG 887 Query 1135 GAAGTAAAAGAAAAGAAG 1152 |||||||| ||||||||| Sbjct 888 GAAGTAAAGGAAAAGAAG 905 > AT2G05410.1 | Symbols: | TRAF-like family protein | chr2:1976918-1978553 FORWARD LENGTH=1082 Length=1082 Score = 148 bits (80), Expect = 1e-34 Identities = 230/300 (77%), Gaps = 20/300 (7%) Strand=Plus/Plus Query 863 AAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGTGAAATT-TGTGA-GCCG 920 ||||||| ||| ||||||||||||||||||||||||||||||| | ||| ||||| || | Sbjct 625 AAACCATAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGT-AGATTCTGTGAAGC-G 682 Query 921 TATT-TTTGAAAAATACCCAGACATTGCAGT-AGGATTCCATGC--AAAGAA-CCAACAT 975 | || ||||||||| ||| ||| |||| | | | ||| | | | ||| || ||| || Sbjct 683 T-TTGTTTGAAAAAAACCTAGATATTGTA-TCAAAATTTCGT-CTTAAA-AATCCAT-AT 737 Query 976 CTT-AAGACAGCATGCATGAATGTCCTCCTCAGCCTAATCGAGACACTGTGTCAGTCACC 1034 || ||||| || ||||||||| ||||||| || ||| ||| || |||||||| || || Sbjct 738 -TTGAAGACTGCGTGCATGAATCTCCTCCTGAGTTTAACCGAAACGCTGTGTCAATCGCC 796 Query 1035 TCAGGAGCTCTCAAATGAAGATATGG-TGGAAGCAGACAATGCTCTAACATATGTGAAAG 1093 ||| || ||||| ||||| | | | || | |||| ||| || ||||| ||| || Sbjct 797 TCAAGAACTCTCCAATGATGGTCTCTCTG-ATGCAGGTGTTGCACTGGCATATTTGATAG 855 Query 1094 ATGC-GGGCTTTAAGGTGGATTGGTTGGAGATGAAGCTGGAGGAAGTAAAAGAAAAGAAG 1152 | | |||||| ||| ||||||||||||||| ||| || || ||| |||| ||||||||| Sbjct 856 AAACAGGGCTT-AAGTTGGATTGGTTGGAGAAGAAACTTGATGAATTAAAGGAAAAGAAG 914 > AT1G31370.1 | Symbols: | Ubiquitin-specific protease family C19-related protein | chr1:11238298-11239363 REVERSE LENGTH=582 Length=582 Score = 113 bits (61), Expect = 4e-24 Identities = 142/179 (79%), Gaps = 14/179 (8%) Strand=Plus/Plus Query 857 TGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGT-GAAATTTGTG 915 ||| ||||| ||| ||| ||||||||||||||||||||||||||||||| ||| | |||| Sbjct 317 TGATGGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAA-TCTGTG 375 Query 916 A-GCCGTATT-TTTGAAAAATACCCAGACATTGCAGTAGGA-TTCCATGCAAAGAACCAA 972 | | || || |||||||| |||||||||||||| | | | |||| | ||||||||| | Sbjct 376 AAGA-GT-TTGTTTGAAAAGCACCCAGACATTGCA-TCGAAATTCCGTCCAAAGAACCCA 432 Query 973 CATCTTAAGA-CAGCATGCATGAAT-GTCCTCCTCAGCCTAA-TCGAGACACTGTGTCA 1028 ||||| | || || ||| | ||||| ||| | || ||| | | | |||| |||||||| Sbjct 433 CATCTGA-GAACAACATCCTTGAATAGTC-TACTAAGCTTGACT-GAGATTCTGTGTCA 488 > AT1G31390.1 | Symbols: | TRAF-like family protein | chr1:11243191-11244392 REVERSE LENGTH=807 Length=807 Score = 95.3 bits (51), Expect = 1e-18 Identities = 208/281 (74%), Gaps = 22/281 (8%) Strand=Plus/Plus Query 862 GAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGT-GAAATTTGTGAGCCG 920 |||| ||| ||||||||||||||||||||||||||||||||||| ||| | ||||| | Sbjct 460 GAAAGCATCGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAA-TCTGTGAACAA 518 Query 921 TATTTTTGAAAAATACCCAGACATTGCAGT-AGGATTCCATGCAAAGAACCAACATCTTA 979 | | ||||| || |||||||||| | | | || ||| | | | ||||||| || | | | Sbjct 519 TCTCTTTGAGAAGCACCCAGACATCGTA-TCAGAATTTCGTTCCAAGAACCCACTTATGA 577 Query 980 AGA-CAGCATGCATGAATGTCCTCCTCA-GCCTAA-TCGAGA-CACTGTGTC-AGTCAC- 1033 || || ||| | |||||| ||| || | | | | | |||| | ||||| | |||| | Sbjct 578 -GAACAACATACTTGAATGACCTACT-ATGTTTGACT-GAGATC-CTGTG-CGAGTC-CT 631 Query 1034 CTCAGGAGCTCTCAAATGAAGATATGG-TGGAA-GCAG-ACAATGCTCTAACATATGTGA 1090 || |||| ||||| | || ||||||| | || || | | | | ||||| | | ||| Sbjct 632 CTGAGGAACTCTCCACTGGTGATATGGCT--AACGC-GTATTCTACACTAACTTGTTTGA 688 Query 1091 AAGATGCGGGCTTTAAGGTGGATTGGTTGGAGATGAAGCTG 1131 || | ||||| |||||| |||||||| |||||| ||| ||| Sbjct 689 AAAAAGCGGGGTTTAAGTTGGATTGGCTGGAGAAGAAACTG 729 > AT1G31380.1 | Symbols: | TRAF-like family protein | chr1:11240451-11241099 REVERSE LENGTH=528 Length=528 Score = 86.1 bits (46), Expect = 8e-16 Identities = 74/87 (85%), Gaps = 4/87 (5%) Strand=Plus/Plus Query 857 TGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGT-GAAATTTGTG 915 ||| ||||| |||| || ||||||||||||||||||||||||||||||| ||| |||||| Sbjct 131 TGATGGAAAGCATGTATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAA-TTTGTG 189 Query 916 A-GCCGTATTTTTGAAAAATACCCAGA 941 | | || | |||||||| ||||||| Sbjct 190 AAGA-GTCTGTTTGAAAAGCACCCAGA 215 > AT1G31400.1 | Symbols: | TRAF-like family protein | chr1:11245225-11246481 REVERSE LENGTH=837 Length=837 Score = 76.8 bits (41), Expect = 5e-13 Identities = 65/76 (86%), Gaps = 4/76 (5%) Strand=Plus/Plus Query 875 TCAATGGGTTTCAAGTTCTTCCTTCACAGGT-GAAATTTGTGAGCCGTATTTTTGAAAAA 933 ||||||||||||||||||||||||||||||| ||| | ||||| | | | || ||||| Sbjct 464 TCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAA-TCTGTGAACAATCTCTTC-AAAAA 521 Query 934 T-ACCCAGACATTGCA 948 | |||||||||||||| Sbjct 522 TCACCCAGACATTGCA 537 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64357098690 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5