BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg324343
Length=2457
Score E
Sequences producing significant alignments: (Bits) Value
AT3G58650.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 3932 0.0
AT5G26910.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 357 3e-97
> AT3G58650.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 8 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT5G26910.1);
Has 2350 Blast hits to 1412 proteins in 248 species: Archae
- 0; Bacteria - 487; Metazoa - 577; Fungi - 236; Plants
- 184; Viruses - 4; Other Eukaryotes - 862 (source: NCBI BLink).
| chr3:21696246-21699998 REVERSE LENGTH=3133
Length=3133
Score = 3932 bits (2129), Expect = 0.0
Identities = 2353/2462 (96%), Gaps = 11/2462 (0%)
Strand=Plus/Plus
Query 1 ATGGACGTTGTTGAGAGAAAAAGACCAAGAGGAGCGTTTCTAAATCTCTTTGATTGGCAT 60
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 568 ATGGACGTCGTTGAGAGAAAAAGACCAAGAGGAGCGTTTCTAAATCTGTTTGATTGGCAT 627
Query 61 GGAAAATCCAGGAAGAAGCTTTTCTCTTCCAATATCTCCCAACTCTCTGAAGAATCTAAG 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 628 GGAAAATCCAGGAAGAAGCTTTTCTCTTCCAATCTCTCCCAACTCTCTGAAGAATCTAAG 687
Query 121 CAAGCAAAAGAGAATGTTCAAAACCCCTCTATTACGCGGCATTCTGTTTTTGAGGTCGAT 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||
Sbjct 688 CAAGCAAAAGAGAATGTTCAAAACCCCTCTATTACGCCGCATTCTGTTTTTGAAGTTGAT 747
Query 181 CAGAGTGTAAAGAACCCAACTTACAACCCGAGAAGTGACTCGAGCTGTTGTGCTTCATCT 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 748 CAGAGTGTAAAGAACCCAACTTACAACCCGAGAAGTGACTCTAGCTGTTGTGCTTCATCT 807
Query 241 GTAACCAGTGATGATGGAAATGTGGTTAGAGCAAGTGTGGTAGCGAGGCTCATGGGTTTA 300
|| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 808 GTTACTAGTGATGATGGAAATGTGGTTAGAGCAAGTGTGGTAGCGAGGCTTATGGGTTTA 867
Query 301 GAGGGTTTACCACTACCAAATGTTTTGGAACAACGGGTTAATCCTGATCTGGATCCATAC 360
|||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||
Sbjct 868 GAGGGTTTACCACTACCAAACGTTTTGGAACCACGGGTTAATCCTGATCTTGATCCATAC 927
Query 361 TTTCTAAGATCCTCGCGCCAAGCAAACACTTGGGATGCTAATGTTGATCGTCAGAGTGAC 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928 TTTCTCAGATCCTCGCGCCAAGCAAACACTTGGGATGCTAATGTTGATCGTCAGAGTGAC 987
Query 421 TTCGATGGTGTTTCTTGGGATCATTTGGATTCAAGAACCAGTAAAGGGCCGCGTAAGA-G 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 988 TTCGATGGTGTTTCTTGGGATCATTTGGATTCAAGAACCAGTAAAGGGCCGCGTAA-ACG 1046
Query 480 GATGATTGAGCGATTTCAAACCGAAACTTTACCCCCAAGATCAGCTAAACCGATCTCTGT 539
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1047 GATGATTGAGCGGTTTCAAACCGAAACTTTACCCCCGAGATCAGCTAAACCGATCTCTGT 1106
Query 540 CACTCATAATAAGCTCTTGTCTCCAATAAGGAATCCTGGATTTGTTCCATCTAGGAACCC 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 CACTCACAATAAGCTCTTGTCTCCAATAAGGAATCCTGGATTTGTTCCATCTAGGAACCC 1166
Query 600 TGCTTATGTAATGGAAGCTGCTTCAAGAATGATTGAGCAAAGTCCACGGATGATTGCAAG 659
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1167 TGCTTATGTAATGGAAGCTGCTTCAAGAATGATCGAGCAAAGTCCACGGATGATTGCAAG 1226
Query 660 AACAAGGGTGGTGTCATCGTCTGATTCTTCTTCGCCAGTTCCATTGAGGATTCGAGATTT 719
|||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1227 AACACGGATGGTGTCATCGTCTGATTCTTCTTCTCCAGTTCCATTGAGGATTCGAGATTT 1286
Query 720 GAAAGAGAAACTAGAAGCTGCGCAGAAAGCGTCAACTTCAGTTCTTCCTCAACTCTCTAA 779
|||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 1287 GAAAGAGAAACTTGAAGCTGCGCAGAAAGCGTCAACTTCAG---TTCCTCAAATCTCTAA 1343
Query 780 TGATACTCGCAACAGTAGGTACTTAAGAGGAGATCAAAACGGGAAGAAAACTACAGTATT 839
||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 1344 TGATACTCGGAACAGTAGGTACCTAAGAGGAGATCAAAACGAGAAGAAAACTACAGTATT 1403
Query 840 GGGGAAAAGCAGTTGTGATGGGTTGAAA---AGTGAAGTGAAGCCACCTTCTTTCTCTGC 896
|||||||| ||||| ||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 1404 GGGGAAAAACAGTTATGATGCTTTGAAAGGTGGTGAAGTGAAGCCACCTTCTTTCGCTGC 1463
Query 897 ACAAGCAAAAGCCAGCAGTAATCAGAAGCAAGACAGCTTAACAACGTCCTCAAGTGGCAA 956
|||||||||| |||||||||||||||||||||||||||| ||| ||| |||||||||||
Sbjct 1464 GCAAGCAAAAGTCAGCAGTAATCAGAAGCAAGACAGCTTATCAATGTCTTCAAGTGGCAA 1523
Query 957 CAAGAGGATGTCTTCGGGACAAAAGGAGAAAATGGAAGCTAAGAATAGGGCGGTTAAAAG 1016
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1524 CAAGAGGATGTCTTCGGGACAAAAGGAGAAAGTGGAAGCTAAGAATAGGGCGGTTAAAAG 1583
Query 1017 CCAAAACAGTATCAAAGGATCTTCCTCGAGCACCGGAAAGAATGTGCTTAAGCAGAACCA 1076
||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||| ||| |
Sbjct 1584 CCAAAACAGTAGCAAAGGATCTTCCTTGAGTACCGGAAAGAATGTGCTTAGGCAAAACAA 1643
Query 1077 CCAGAAGCAGAACTGCAGAGACAATCAGCAATCCAGGAGAGTAATAAACAAAGTAGTAAA 1136
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1644 CCAGAAGCAGAACTGCAGAGACAATCAGCAATCCAGGAGAGTAATGAACAAAGTAGTAAA 1703
Query 1137 TAAGAATCTTGTGGAAAGTGGATCTATATCAAAAAGCCCGGGATTTACTATGACATCAGC 1196
|||| |||||||||||||||||||||||| || ||| | |||||||||||| |||||||
Sbjct 1704 TAAGGTTCTTGTGGAAAGTGGATCTATATCGAAGAGCTCAGGATTTACTATGTCATCAGC 1763
Query 1197 AGAAAAACTGACTTCTTTACCTTTATCCCGCAAAAAGAACCTTCCTCGAAACAAAAAACC 1256
|||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 1764 AGAAAAACCCACTTCTTTACCTTTATCCCGCAAAAAGAGTCTTCCTCGAAGCAAAAAACC 1823
Query 1257 GCGGAATGGAGTGCAAGAATCGGGAATTTATGAAGATAAGAGGATCAAAAGGGGTGAAAA 1316
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 1824 GCGGAATGGAGTGCAAGAATCTGGAATTTATGAAGATAAGCGGATCAAAAGGGGTGAAAA 1883
Query 1317 GTCGATAAAATGTAACATTTCCATTGATGGCGACTCGAGTACGAGTAAAGATGATAAGAA 1376
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1884 GTCGATAAAATGTAACATTTCCATTGATGGCGACTCGAGTACTAGTAAAGATGATCAGAA 1943
Query 1377 AAGGGACATGGATGTGATATCTTTCACTTTCTCATCTTCGATCAAAGGTTTATCA--T-C 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1944 AAGGGACATGGATGTGATATCTTTCACTTTCTCATCTTCGATCAAAGGTTTATCATCTCC 2003
Query 1434 TCATCCACAAGGAACCAAACAAGATGCAGACTCTGCTATAAGGTTCAATGTGATAGGTGG 1493
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2004 TCATTCACAAGGAACCAAACAAGATGCAGACTCTGCTATAAGGTTCAATGTGATAGGTGG 2063
Query 1494 TGATTCTTTAAATGCACTTTTGGAGCAGAAGCTCAGGGAATTGACCTCAAAGATTGAATC 1553
||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||
Sbjct 2064 TGATTCTTTAAATGCGCTTTTGGAGCAGAAGCTCAGGGAATTGACAACGAAGATTGAATC 2123
Query 1554 ATCTAGCTCTAGCTTGATCCAAGAAGAGTCTTTGAGTTCCCTTTCAAAGGATAGAGCGAA 1613
|||||||||||||||||||||||||||| | ||||||||| ||||||| |||||||||||
Sbjct 2124 ATCTAGCTCTAGCTTGATCCAAGAAGAGCCCTTGAGTTCCATTTCAAAAGATAGAGCGAA 2183
Query 1614 TGGGATGATTTCATCGCCTTCCAAATATAGCGAATTGACTCAAAGCAGTCTTGATAGAGT 1673
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2184 TGCGATGATTTCATCGCCTTCCAAATATAGCGGATTGACTCAAAGCAGTCTTGATAGAGT 2243
Query 1674 TTTAACAGAGAGTGAATCTGTTTCTGACTGCACTTCATTCTATAACAACCAGAAAGTCCA 1733
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 2244 TTTAACAGAGAGTGAATCTGTTTCTGACTGCACTTCATTCTTTAACAGCCAGAAAGTCCA 2303
Query 1734 GAAGAAGAAGACGATGCAGGGAGAAGAACAAGAAGTTAGCAGCATCACCACGCTTACAGA 1793
|||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2304 GAAGCAGAAGGTAATACAGGGAGAAGAACAAGAAGTTAGCAGCATCACCACTCTTACAGA 2363
Query 1794 AGCCGATGATTTTGCACTCTCCTGCAGCAAGAGTATCTCAGATTGCAGACATGACAGAGA 1853
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2364 AGCTGATGATTTTGCACTCTCCTGCAGCAAGAGTATCTCAGATTGCAGACATGACAGAGA 2423
Query 1854 ATATGGCATGAAACAGAGTTCATCAGATCAGGAGCTCACTTGGGTTTCATCAAACGAGTC 1913
|||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||
Sbjct 2424 ATATGGCATGAAACAGAGTTCATCAGATCAAGAGCTCACTTGGGGTTCATCCAACGAGTC 2483
Query 1914 CCAGCACACCTTAGATGAAACAGAATCAGCAACACTCGATTGGGAGCTCGAGTACATAAC 1973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2484 CCAGCACACCTTAGATGAAACAGAATCAGCAACACTCGATTGGGAGCTCGAGTACATAAC 2543
Query 1974 CGAGATCCTCAACTCTGGGCAGCTCATGTTTCAAGACTTTGCCTCAGGGACAACCACTAA 2033
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2544 CGAGATCCTCAACTCTGGGCAGCTCATGTTTCAAGACTTCGCCTCAGGGACAACCACTAA 2603
Query 2034 TGAATCATTACTACCCTCGAGCCTCTTTGACGAAATGGAACGCTCTAGAGGAGCTGCGAT 2093
|||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||| |
Sbjct 2604 TGAATCATTACTACCCTCCAGCCTCTTTGATGAAATGGAACGCTCTCGAGGAGCTGCAAC 2663
Query 2094 GTCAATGAAGACAGAAAGAAAGGCGCTTTTCGACTGTGTGAATCAGTGCTTAGCGGTGAA 2153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2664 GTCAATGAAGACAGAAAGAAAGGCGCTTTTCGACTGTGTGAATCAGTGCTTAGCGGTGAA 2723
Query 2154 ATTTGAAAGGATGTTAATTGGAAGCTGCAAAGGGATGATGATGTCAGGTGGGATTTTGTT 2213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2724 ATTTGAAAGGATGTTAATTGGAAGCTGCAAAGGGATGATGATGTCAGGTGGGATTTTGTT 2783
Query 2214 GGAACATAGAGATCTGTTGGCTGAAGAAGTGAACAGAGAAGTAAAAGGGTTGAAGAAGAT 2273
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2784 GGAACATAGAGATTTGTTGGCTGAAGAAGTGAACAGAGAAGTAAAAGGGTTGAAGAAGAT 2843
Query 2274 GAGAGAGATGATGATCGACGAGCTTGTGGATCATGACATGAGCTGTTTCGAAGGGAGATG 2333
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2844 GAGAGAGATGATGATCGACGAGCTTGTGGATCATGACATGAGCTGTTTTGAAGGGAGATG 2903
Query 2334 GATTGGTTACGAAAGAGAGATGTTTGAGGAAGGCATAGACATGGAAGGAGAGATTGTTTC 2393
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2904 GATTGGTTATGAAAGAGAGATGTTTGAGGAAGGAATAGACATGGAAGGAGAGATTGTTTC 2963
Query 2394 TGATTTGGTTGATGATTTAGTTAGTGATCTTTTCTCTATTAGTGTTCTTAAACGGTCGTT 2453
|| ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||
Sbjct 2964 TGCTTTGGTTGATGATTTAGTTAGTGATATTTTATCTACTAGTGTTCTTAAACGGTCGTT 3023
Query 2454 GT 2455
||
Sbjct 3024 GT 3025
> AT5G26910.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G58650.1);
Has 1322 Blast hits to 684 proteins in 162 species: Archae
- 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155;
Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink).
| chr5:9465929-9470403 REVERSE LENGTH=3404
Length=3404
Score = 357 bits (193), Expect = 3e-97
Identities = 630/831 (76%), Gaps = 69/831 (8%)
Strand=Plus/Plus
Query 1116 AGT-AATAAACAAAGTAGTAAATAAGAATCTTGTGGAAAGTGGATCTATATCAAA-AAGC 1173
||| ||| |||||||| ||||| ||| || |||||||||||||| |||||||| ||
Sbjct 1742 AGTAAAT-AACAAAGTTGTAAACAAGGTTCCAGTGGAAAGTGGATCGATATCAAAGCAG- 1799
Query 1174 CCGGGATTTA-CTATGACATCAGCAGAAAA-ACTGACTTCTTTACCTTTATCCCGCAAAA 1231
||| |||| | | | | || || ||||| | | ||||||||| |||| || |||||||
Sbjct 1800 TTGGG-TTTATCAACGGCCTCGGCGGAAAAGAAT-ACTTCTTTATCTTTGTCACGCAAAA 1857
Query 1232 AGAAC-CTTCCTCGAAACAAAAAAC-CGCGGAAT-GGAGTGCAAGAATCGGGAATTTATG 1288
|| || ||||| || | |||||| | | | ||| ||| ||||| |||| ||||| | ||
Sbjct 1858 AG-ACTCTTCCCCGGAGCAAAAAGCTC-CCAAATGGGA-TGCAAAAATCTGGAATCTCTG 1914
Query 1289 AAGATAAGA-GGATCAAAAGGGGTGAAAAGT-CGATAAAATGTAACATTTCCATTGATGG 1346
| ||||| | ||| ||||||| | ||||| | ||| ||||||||||| ||||||||||
Sbjct 1915 ATGATAA-ACGGACCAAAAGGAGCGAAAA-TATGATCAAATGTAACATCACCATTGATGG 1972
Query 1347 CGACTCG-AGTACGAGTAAAGATGATAAGAAAAGGGACATGGATGTGATATCTTTCACTT 1405
| || | | | | ||||||||||| ||||| ||| ||||||||||| || ||||| |
Sbjct 1973 TGGCTTGAACAAAG-GTAAAGATGATCGGAAAAAGGAAATGGATGTGATTTCATTCACAT 2031
Query 1406 TCTCATCTTCGATCAAAGGTTTA---TC--A-TC-TCAT-C-C-A--CAAGGAACCAAAC 1453
|||||||| | |||||||||||| || | || | || | | | ||||||| |
Sbjct 2032 TCTCATCTCCCATCAAAGGTTTATCTTCTGATTCATTATCCTCTACTCAAGGAATTGGTC 2091
Query 1454 AAGATGCAGACTCTGCTA-TAAGGTTCAATGTGATAGGTGGTGATTCTTTAAATGCACTT 1512
|||| |||||||||| | | || ||||| | || || || ||||| |||||||| ||
Sbjct 2092 AAGACACAGACTCTGC-AGTTAGTTTCAA--T-ATTGGCGGCGATTCCTTAAATGCTCTG 2147
Query 1513 TTGGAGCAGAAGCTCAGGGAATTGACCTCAAAGATTGAATCATCTAGCTCTAGCTTGATC 1572
|||||||| |||||||| || |||| || ||| |||| || ||||||| |||| ||| |
Sbjct 2148 TTGGAGCAAAAGCTCAGAGAGCTGACTTCTAAGCTTGAGTCTTCTAGCTGTAGCCTGACC 2207
Query 1573 CAAGAAGAGTCTTTGA-GTTCCCTTTCAAAGGATAGAG-CGAATGGGATGATTTCATCGC 1630
||||||||| | || | |||| || ||| |||| ||| ||| |||||||||||||
Sbjct 2208 CAAGAAGAG-CCTTCATATTCCATTCCAATGGAT-GAGATGAACGGGATGATTTCATTTT 2265
Query 1631 CTTCCA-AATATAGCGAA-TTGACTCAAAGCAGTCTTG-ATAGAGTTTTAACAGAGAGTG 1687
| | || ||||| | || | || |||| | ||| || || ||||||| |||||||||
Sbjct 2266 CAT-CAGAATAT-GAAAAGTCAACCCAAAACGGTC-TGCGTAAAGTTTTATCAGAGAGTG 2322
Query 1688 AATCTGTTTCTGACTGCACTTCATTCTATAACAACCAGAAAGTCCAGAAGAAGAAGACGA 1747
||||||||||||||||||| ||||||||| |||| || ||| |||||| | ||| | |
Sbjct 2323 AATCTGTTTCTGACTGCACCTCATTCTATGACAAACAAAAATTCCAGAT-AC-AAG-C-A 2378
Query 1748 TGCAGGGAGAAGAACAAGAAGTTAGCAGCATCACCAC-GCTTACAGAAGCCGATGATTTT 1806
| | ||| | || |||||||||||||| | ||| | | || ||||| |||||| |
Sbjct 2379 -G-A---AGA-GCAC--GAAGTTAGCAGCATTAGCACTG-TGACGGAAGCAGATGATCTA 2429
Query 1807 -GCA-CTCTCCTGCAGCAAGAGTATCTCAGATTGCAGACATGACAG-AGAATATGGCATG 1863
| | |||| ||||||||| || |||||||||||||||| ||| | ||||||||| |
Sbjct 2430 AGAAGCTCT--TGCAGCAAGGGTTTCTCAGATTGCAGACA-GACCGCAGAATATGGGAC- 2485
Query 1864 AA-ACAGAGTTCATCAGATCAGGAGCTCACTTGGGTTTCATCAAACGAGTC 1913
|| |||| ||||||||||| || ||||| |||||||||| ||| |||||
Sbjct 2486 AATACAGTCCTCATCAGATCAAGAACTCACCTGGGTTTCATTAAATGAGTC 2536
Score = 239 bits (129), Expect = 1e-61
Identities = 376/492 (76%), Gaps = 29/492 (6%)
Strand=Plus/Plus
Query 1948 CTCGATTGGGAGCTCGAGTACATAACCGAGATCCTCAACTCTGGGCAGCTCATGTTTCAA 2007
||||| |||||| ||||||||||| ||||||||||| |||| || || ||| | ||
Sbjct 2610 CTCGACTGGGAGTTCGAGTACATATCCGAGATCCTCGGGTCTGACCAACTGATGGTGAAA 2669
Query 2008 GACTTTGCCTCAGGGACAACCACTAATGAATCATTACTACCCT-CGAGCCTCTTTGACGA 2066
|| | ||| | |||| |||| || | | || || ||| ||||||||||||| ||
Sbjct 2670 GAATATGCTTTGGGGATGGCCAC---TG-A-C-GTATTA-CCTGCGAGCCTCTTTGATGA 2722
Query 2067 AATGGAACGCTCTAGAGGAGCTGCGA-TGTCAATGAAGA-CAGAAAGAAAGGCGCT-TTT 2123
||||||| || | |||||| | | | || || | || | |||||| | || |||
Sbjct 2723 AATGGAAGGC-C--GAGGAGAAGTAACAG-CAGCCAAAATCA-AGAGAAAGACACTGTTT 2777
Query 2124 CGACTGTGTGAATCAGTGCTTAGCGGTGAAATTTGA-AAGGATGTTAATTGGAAGCTGCA 2182
|| | ||||||| ||||||||||| | | || || | |||||| || || |||||||
Sbjct 2778 -GATTTTGTGAATAAGTGCTTAGCGCTCAGATGCGAGCA-GATGTTTATGGGTAGCTGCA 2835
Query 2183 AAGGGATGA-TGATGTCAGGTGGGATTTTGTTGGAACATAGAGATCT-GTTGGCTGAAGA 2240
|||| | | || | ||| ||| ||||||| || || |||||| | ||| || |||||
Sbjct 2836 GAGGGCT-ATTGGGGAAAGGCGGGTTTTTGTTTGAGCAAAGAGAT-TGGTTAGCAGAAGA 2893
Query 2241 AGTGAACAGAGAAG-TAAAAGGGTTGAAGAAGATGAGAGAGATGATGATCGACGAGCTTG 2299
| ||||||||| || | | ||||||||||||||||||||||||||||| ||||||||||
Sbjct 2894 ACTGAACAGAG-AGATTCATGGGTTGAAGAAGATGAGAGAGATGATGATGGACGAGCTTG 2952
Query 2300 TGGATCAT-GACATGAGCTGTTTCGAAGGGAGATGGATTGGTTACGAAAGAGAGATGTTT 2358
| || || || |||||| ||||||||||||||||| ||| || ||| ||||||| || |
Sbjct 2953 TTGA-CAAAGAGATGAGCAGTTTCGAAGGGAGATGGCTTGATTTCGAGAGAGAGACGTAT 3011
Query 2359 GAGGAAGGCATAGACATGGAAGGAGAGATTGTTTCTGAT-TTGGTTGATGATTTAGTTAG 2417
|| |||||||| ||||| || |||||||| || ||| | ||||| |||||||||||||
Sbjct 3012 GAAGAAGGCATTGACATTGAGGGAGAGATAGTCTCT-ACGTTGGTAGATGATTTAGTTAA 3070
Query 2418 TGATCTTTTCTC 2429
||||||| ||||
Sbjct 3071 TGATCTTGTCTC 3082
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121905671490
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5