BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg324483
Length=1086
Score E
Sequences producing significant alignments: (Bits) Value
AT3G60290.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1480 0.0
AT2G44800.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1002 0.0
> AT3G60290.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:22282627-22284556
FORWARD LENGTH=1251
Length=1251
Score = 1480 bits (801), Expect = 0.0
Identities = 995/1089 (91%), Gaps = 12/1089 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGAAACAATTAAGAGTGTGGTTGATGATTGCTTCACCAGTGCTATGGCACTTACC 60
||||| ||||||| ||||||||||||| |||||| ||| ||||||||||||| ||||||
Sbjct 36 ATGGAGGAAACAAATAAGAGTGTGGTTAATGATTACTTTACCAGTGCTATGGAACTTACA 95
Query 61 GACTCAGGTGTCCTTCATGTGCCTACTCGTTACATTCTTCCACCTTCACAACGACCAATG 120
|| ||||||| || ||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 96 GAGTCAGGTGACCCTCACGTGCCTACCCGTTACATTCTTCCACCTTCACAACGACCAATG 155
Query 121 CTCGGTTCAAGCATTGGCAGTGA-CACCATCACGCTTCCTGTCATTGATCTCTCCCTCTT 179
|||||| |||||||||||| | ||||||| ||||||||||||||||||||| ||||
Sbjct 156 CTCGGTCCAAGCATTGGCA-CCAGTACCATCAATCTTCCTGTCATTGATCTCTCCTTCTT 214
Query 180 ACACGATCCTTTGCTTAGACGCTGTGTCATCCATGAGATTGAAATGGCCTGCAAGGGATT 239
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 215 ACACGATCCTTTGCTTAGACTATGTGTCATCCATGAGATTGAATTGGCCTGCAAGGGATT 274
Query 240 TGGTTTCTTTCAGATTATAAACCATGGAATATCATCATCAGTGGTGAAAGATGCGCTAGA 299
||||||||||||| ||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct 275 TGGTTTCTTTCAGGTTATAAACCATGGAATATCATCAGCAGTGGTGAAAGATGCACAAGA 334
Query 300 TGCAGCTACAAGGTTCTTTGACTTACCTGTTGATGAGAAGATGCTTCTGGGTTCTGATAA 359
| ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct 335 TTCAGCTACAAGGTTCTTTGACTTACCTGCCGATGAGAAGATGCATCTGGTTTCTGATAA 394
Query 360 CGTTCATACA-CCAGTAAGGTATGGCACCAGCTTAAACCACTCAACAGACAAAGTTCATT 418
|||| | |||||||||||||| |||||| ||||||| |||||||||| ||||||||
Sbjct 395 TTTTCA-GGAGCCAGTAAGGTATGGTACCAGCATAAACCATTCAACAGACAGAGTTCATT 453
Query 419 ACTGGAGAGATTTCATCAAACATTACTCCCATCCTCTTTCAAAGTGGATCGATTTGTGGC 478
|||||||||||||||| |||||||||||||||||||| ||||| |||||| |||||||||
Sbjct 454 ACTGGAGAGATTTCATAAAACATTACTCCCATCCTCTCTCAAACTGGATCAATTTGTGGC 513
Query 479 CATCCAACCCTCCATGCTACAAGGAAAAAGTGGGGAAATACGCAGAAGCAACGCATGTGC 538
| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 514 CTTCCAATCCTCCCTGCTACAAGGAAAAGGTGGGGAAATACGCAGAAGCAACGCATGTTT 573
Query 539 TGCATAAGCAACTAATTGAAGCTATCTCAGAAAGTCTAGGACTGGAGAAAAATTACTTAC 598
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 TACATAAGCAACTAATTGAAGCTATCTCAGAAAGTCTAGGACTGGAGAAAAATTACTTAC 633
Query 599 AAGAAGAAATTGAAGAAGACTCGCAAGTCATGGCGGTGAACTGCTATCCAGCTTGTCCCG 658
| |||||||| ||||||| ||| |||||||||||||| |||||||||||||||||||| |
Sbjct 634 AGGAAGAAATAGAAGAAGGCTCACAAGTCATGGCGGTAAACTGCTATCCAGCTTGTCCTG 693
Query 659 AACCCGAAATTGCCTTGGGAATGCCACCACACTCGGACTTTGGCTCACTGACCATCTTAC 718
||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||
Sbjct 694 AACCCGAGATTGCCTTGGGAATGCCACCACACTCGGACTATGGCTCGCTGACAATCTTAC 753
Query 719 TCCAGAGTAGCCA-GGGCCTGCAGATAATGGACTGCAACAAGAACTGGGTTTGTGTGCCG 777
||||||||||| | |||| ||||||||| |||||||||||| ||||||||||||||||||
Sbjct 754 TCCAGAGTAGCGAAGGGC-TGCAGATAAAGGACTGCAACAACAACTGGGTTTGTGTGCCG 812
Query 778 TATATTGAAGGAGCTCTGATAGTCCAGTTGGGAGATCAAATAGAAGTCATGAGCAATGGC 837
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 813 TATATTGAAGGAGCTCTGATAGTCCAGTTGGGAGATCAGGTAGAAGTGATGAGCAATGGC 872
Query 838 ATATACAAGAGTGTGGTTCATCGTGTAACAGTGAACAAAAATTACAAGCGGCTCTCTTTT 897
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 873 ATATACAAGAGTGTGGTTCATCGTGTAACAGTGAACAAAGATTACAAGCGGCTCTCTTTT 932
Query 898 GCAAGTCTTCACAGTATGCCTCTGCACAAGAAAATAAGTCCAGCA-CTTGAGCTCGTCAA 956
||||||||||||||| | ||| ||||||||||||||||||||||| || ||||||||||
Sbjct 933 GCAAGTCTTCACAGTCTACCTATGCACAAGAAAATAAGTCCAGCAACTC-AGCTCGTCAA 991
Query 957 TGAAAATAAACCAGCTGCCTATGGAGAATTCAGCTTCAACGATTTTCTTGACTATATCTC 1016
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 992 TGAAAATAAACCAGCTGCATATGGAGAATTCAGCTTCAACGATTTTCTTGATTATATATC 1051
Query 1017 TAGCAATGATATTACACA-ACAAAGATTCATTGATACACTCAAGAA-GAACAATTTATGC 1074
|| || ||||||||||| | ||||||||||||||||||||| ||| ||| || | ||
Sbjct 1052 CAGAAACGATATTACACAGA-AAAGATTCATTGATACACTCA-GAAAGAAAAACCTCTGA 1109
Query 1075 AGATGGTGT 1083
|||||||||
Sbjct 1110 AGATGGTGT 1118
> AT2G44800.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr2:18466820-18468551
FORWARD LENGTH=1258
Length=1258
Score = 1002 bits (542), Expect = 0.0
Identities = 911/1084 (84%), Gaps = 46/1084 (4%)
Strand=Plus/Plus
Query 1 ATGGAAGAAACAATTAA-GAGTGTGGTTGATGATTGC-TTCACCAGTGCTATGGCACTTA 58
||||| ||||||| || |||| || ||||||||| | || || ||||| ||| ||||||
Sbjct 185 ATGGAGGAAACAA-AAATGAGTTTGCTTGATGATT-CTTTTACAAGTGCAATGACACTTA 242
Query 59 CCGACTCAGGTGT-CCTTCATGTGCCT-ACTCGTTACATTCTTCCACCTTCACAACGACC 116
|| | |||||||| || ||| || ||| | ||| ||| ||||||| ||||| ||| | ||
Sbjct 243 CCAATTCAGGTGTGCC-TCAAGTCCCTGA-TCGCTACGTTCTTCCTCCTTCGCAAAGGCC 300
Query 117 AATGCTC--GGTTCAAGCATT-GG---CAGTGACACCATCACGCTTCCTGTCATTGATCT 170
| |||| ||||||||| || || ||| || | | | || |||||||||||||||||
Sbjct 301 -A-GCTCTTGGTTCAAGC-TTAGGCACCAGCGAGA-C-T-ACACTTCCTGTCATTGATCT 354
Query 171 CTCCCTCTTACACGATCCTTTGCTTAGA-CGCTGTGTC-ATCCATGAGATTGA-AATGGC 227
||| || || ||| | ||||| ||| || | || | | ||||| |||||| | |||||
Sbjct 355 CTCTCTTTTGCACCAACCTTTCCTTCGATCCCT-CG-CAATCCACGAGATT-AGCATGGC 411
Query 228 CTGCAAGGGA-TTTGGTTTCTTTCAGATTATAAACCATGGAATATCATCATCAGTGGTGA 286
|||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |
Sbjct 412 CTGCAA-GGAGTTTGGTTTCTTTCAGGTTATAAACCATGGAATACCATCATCAGTGGTTA 470
Query 287 AAGATGCGC-TAGATGCAGCTACA-AGGTTCTTTGACTTACCTGTTGATGAGAAGATGCT 344
| ||||| | |||||||||| ||| | |||||| ||||||||||| || |||||||||||
Sbjct 471 ACGATGC-CTTAGATGCAGCAACACA-GTTCTTCGACTTACCTGTGGAAGAGAAGATGCT 528
Query 345 TCTGGGT-TCTG-ATAACGTTCATACA-CCAGTAAGGTATGGCACCAG-CTTAAACCACT 400
||| ||| |||| | ||||||||| | ||||| ||||||||||| || ||| ||||| |
Sbjct 529 TCT-GGTGTCTGCA-AACGTTCAT-GAGCCAGTCAGGTATGGCACAAGCCTT-AACCATT 584
Query 401 CAACAGACAAAGTTCATTACTGGAGAGATTTCATCAAACATTACTCCCATCCTCTTTCAA 460
||||||||| |||||| |||||||||||||||||||| |||||||| ||||| || ||||
Sbjct 585 CAACAGACAGAGTTCACTACTGGAGAGATTTCATCAAGCATTACTCTCATCCACTCTCAA 644
Query 461 AGTGGATCGATTTGTGGCCATCCAACCCTCCATGCTACAAGGAAAAAGTGGGGAAATACG 520
||||||||||| |||||||||| || ||||||||||||||||| |||||||| || || |
Sbjct 645 AGTGGATCGATATGTGGCCATCAAATCCTCCATGCTACAAGGATAAAGTGGGCAAGTATG 704
Query 521 CAGAAGCAACGCATGTGCTGCATAAGCAACTAATTGAAGCTATCTCAGAAAGTCTAGGAC 580
|||| ||||| ||| |||| || ||||| |||| ||||||||||||||||| || ||||
Sbjct 705 CAGAGGCAACACATTTGCTACACAAGCAGTTAATAGAAGCTATCTCAGAAAGCCTGGGAC 764
Query 581 TGGAGAAAAATTACTTACAAGAAGAAATTGAAGAAGACTCGCAAGTCATGGCGGTGAACT 640
||||||||||||||||||||||||| || ||||||| ||| ||||||||||| ||||| |
Sbjct 765 TGGAGAAAAATTACTTACAAGAAGAGATAGAAGAAGGCTCACAAGTCATGGCAGTGAATT 824
Query 641 GCTATCCAGCTTGTCCCG-AACCCGAAATTGCCTTGGGAATGCCACCACACTCGGACTTT 699
| |||||||| || |||| |||| ||||| ||||||||||||||||||||||| |||||
Sbjct 825 GTTATCCAGCATG-CCCGGAACCTGAAATGGCCTTGGGAATGCCACCACACTCAGACTTC 883
Query 700 GGCTCACTGACCATCTTACTCCAGAGTAGCCAGGGCCTGCAGATAATGGACTGCAACAAG 759
||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||||
Sbjct 884 AGCTCACTGACCATCTTACTTCAGAGTAGCAAGGGACTCCAGATAATGGACTGCAACAAA 943
Query 760 AACTGGGTTTGTGTGCCGTATATTGAAGGAGCTCTGATAGTCCAGTTGGGAGATCAAATA 819
||||||||||||||||||||||| ||||||||| ||||||| ||| |||||||||| ||
Sbjct 944 AACTGGGTTTGTGTGCCGTATATAGAAGGAGCTTTGATAGTTCAGCTGGGAGATCAGGTA 1003
Query 820 GAAGTCATGAGCAATGGCATATACAAGAGTGTGGTTCATCGTGTAACAGTGAACAAA-AA 878
|| || |||||||| |||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 1004 GAGGTGATGAGCAACGGCATATACAAGAGCGTCATTCATCGTGTAACAGTGAACAAAGAA 1063
Query 879 TTACAAGCGGCTCTCTTTTGCAAGTCTTCACAGTATGCCTCTGCACAAGAAAATAAGTCC 938
| ||| |||| ||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1064 GT-CAAAAGGCTATCTTTTGCAAGTCTTCACAGTCTACCTCTGCACAAGAAAATAAGTCC 1122
Query 939 AGCACTTGAGCTCGTCAATGAAAATAAACCAGCTGCCTATGGAGAATTCAGCTTCAACGA 998
||||| | |||||||| ||| || || | ||||||||||| || || ||||||||
Sbjct 1123 AGCACCAAAACTCGTCAACCCAAACAATGCACCAGCCTATGGAGAGTTTAGTTTCAACGA 1182
Query 999 TTTTCTTGA-CTATATCTCTAGCAATGATATTACACAACAAAGATTCATTGATACACTCA 1057
|||||| || ||| ||||| ||||| ||| ||| |||| ||||||||||||| ||| | |
Sbjct 1183 TTTTCT-GAACTACATCTCAAGCAACGATTTTATACAAGAAAGATTCATTGACACAATAA 1241
Query 1058 AGAA 1061
||||
Sbjct 1242 AGAA 1245
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53212577700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5