BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg324657
Length=1086
Score E
Sequences producing significant alignments: (Bits) Value
AT3G62220.1 | Symbols: | Protein kinase superfamily protein | ... 1773 0.0
AT2G47060.4 | Symbols: | Protein kinase superfamily protein | ... 876 0.0
AT3G17410.1 | Symbols: | Protein kinase superfamily protein | ... 479 3e-134
> AT3G62220.1 | Symbols: | Protein kinase superfamily protein
| chr3:23029100-23031155 REVERSE LENGTH=1367
Length=1367
Score = 1773 bits (960), Expect = 0.0
Identities = 1044/1086 (96%), Gaps = 0/1086 (0%)
Strand=Plus/Plus
Query 1 ATGAGCTGTTTTGGCTGTTGCCGCGACGATGATTTGCCTGGAGCTGCTGATTATGGAGCT 60
||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |
Sbjct 106 ATGAGCTGTTTTGGCTGTTGCCGTGAAGATGATTTGCCTGGAGCTAATGATTATGGAGGT 165
Query 61 CACAATATGACCAAACAATCTGGAGGAAATGATGGAAGACGCAATGGTTCTGAAACTGCA 120
|||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct 166 CACAATATGACCAAACAATCTGGAGGAAATGATGGAAGGCGCAACGGCTCTGAAACTGCA 225
Query 121 CAAAAAGGTGCTCAAAGTGTGAAAGTGCAGCCTATAGAAGTAGCTGCTATTCTCGCTGAT 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 226 CAAAAAGGTGCTCAGAGTGTGAAAGTGCAGCCTATAGAAGTAGCTGCTATTCTCGCTGAT 285
Query 181 GAACTGATAGAGGCAACTAATGATTTTGGAACAAATTCTCTTATCGGTGAAGGCTCGTAT 240
|||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 286 GAACTGATTGAAGCAACGAATGATTTTGGAACTAATTCTCTTATCGGTGAAGGCTCGTAT 345
Query 241 GCGAGAGTGTATCACGGGGTGTTAAAGAATGGCCAGCCTGCCGCGGTTAAAAAGTTAGAT 300
|||||||||||||||||||||||||||||||| |||| ||| || ||||||||||||||
Sbjct 346 GCGAGAGTGTATCACGGGGTGTTAAAGAATGGTCAGCGTGCAGCCATTAAAAAGTTAGAT 405
Query 301 TCTAACAAACAGCCTGATGAGGAATTTCTTGCCCAGGTTTCCATGGTTTCGAGGTTGAAG 360
||||||||||||||| |||| || ||||| || |||||||||||||||||||||||||||
Sbjct 406 TCTAACAAACAGCCTAATGAAGAGTTTCTAGCACAGGTTTCCATGGTTTCGAGGTTGAAG 465
Query 361 CATACTAACTTTGTTGAGCTGCTTGGTTACTCTGTTGATGGGAATTCGCGGATACTTGTC 420
||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 466 CATGTTAACTTTGTTGAGCTGCTTGGTTACTCTGTTGATGGGAATTCGAGGATACTTGTC 525
Query 421 TTTGAGTTTGCCCAAAATGGATCTCTTCATGATATTCTTCATGGGAGAAAAGGTGTGAAG 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 526 TTTGAGTTTGCCCAAAATGGATCTCTTCATGATATTCTTCACGGGAGAAAAGGTGTGAAG 585
Query 481 GGAGCAAAGCCTGGTCCACTCTTGTCGTGGCATCAACGAGTGAAGATTGCGGTTGGAGCA 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 586 GGAGCAAAGCCTGGTCCACTCTTGTCGTGGCATCAACGAGTGAAGATTGCTGTTGGAGCA 645
Query 541 GCAAGAGGGCTTGAGTACTTACATGAAAAGGCGAATCCACATGTCATCCACCGTGACATA 600
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 646 GCAAGAGGGCTTGAGTATTTACATGAAAAGGCAAATCCACATGTCATCCACCGTGACATA 705
Query 601 AAGTCCAGCAACGTTCTAATCTTTGATAATGATGTAGCTAAAATTGCTGACTTTGATCTG 660
|| |||||||| ||||||||||||||||| |||||||| || || ||||||||||||||
Sbjct 706 AAATCCAGCAATGTTCTAATCTTTGATAACGATGTAGCCAAGATAGCTGACTTTGATCTC 765
Query 661 TCAAATCAAGCTCCTGATATGGCAGCACGCCTTCATTCAACTCGTGTTCTTGGAACCTTT 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 TCAAATCAAGCTCCTGATATGGCAGCACGCCTTCATTCAACTCGTGTTCTTGGAACCTTT 825
Query 721 GGTTACCATGCCCCTGAATATGCAATGACTGGGCAACTGAGTGCCAAGAGTGATGTATAC 780
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 826 GGTTACCATGCCCCTGAATATGCAATGACTGGGCAATTGAGTGCCAAGAGTGACGTATAC 885
Query 781 AGTTTCGGAGTTGTACTGCTCGAGCTTCTTACAGGTCGAAAGCCTGTTGATCATACATTG 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 AGTTTCGGAGTTGTACTGCTCGAGCTTCTTACAGGTCGAAAGCCTGTTGATCATACATTG 945
Query 841 CCTCGAGGCCAGCAAAGTCTAGTCACATGGGCTACACCAAAGCTAAGCGAAGACAAGGTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 CCTCGAGGCCAGCAAAGTCTAGTCACATGGGCTACACCAAAGCTAAGCGAAGACAAGGTT 1005
Query 901 AAGCAGTGTGTTGATTCAAGACTCGGAGGAGATTACCCTCCAAAAGCTGTTGCTAAGTTA 960
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1006 AAGCAGTGTGTTGATTCAAGACTGGGAGGAGATTACCCTCCAAAAGCTGTTGCTAAGTTA 1065
Query 961 GCTGCTGTTGCTGCATTGTGTGTACAATACGAAGCTGATTTCAGACCAAACATGAGTATT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066 GCTGCTGTTGCTGCATTGTGTGTACAATACGAAGCTGATTTCAGACCAAACATGAGTATT 1125
Query 1021 GTCGTGAAGGCTCTGCAACCATTGTTGAATGCTCGGTCCGGACCTGCGGGAGAAGGAGCA 1080
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 1126 GTCGTGAAGGCTCTGCAACCATTGTTGAATGCTCGGACCGGACCTGCAGGAGAAGGAGCA 1185
Query 1081 CCTTAG 1086
||||||
Sbjct 1186 CCTTAG 1191
> AT2G47060.4 | Symbols: | Protein kinase superfamily protein
| chr2:19332904-19334971 REVERSE LENGTH=1500
Length=1500
Score = 876 bits (474), Expect = 0.0
Identities = 825/988 (84%), Gaps = 50/988 (5%)
Strand=Plus/Plus
Query 1 ATGAGCTGTTTTGGCTGTTGCCGCGACGATGAT--T-TGCCTGGAGCTGCTGATTATGGA 57
||||| || ||||| ||||| | || |||||| | ||| | | ||||||||||||||
Sbjct 95 ATGAGTTGCTTTGGGTGTTGTGGGGAGGATGATGATATGCATAAAACTGCTGATTATGGA 154
Query 58 -G-C-TCACAA-TATGACCAAACA--AT-CTGGAGGAAATGATGGAA-G-A-C-GCAATG 106
| | ||| || | | ||||||| | || ||||||||||| || | | | ||| |
Sbjct 155 GGTCGTCATAACCAAG-CCAAACACTTTCCTCCAGGAAATGATGCAAGGCACCACCAA-G 212
Query 107 GTTCTGAAACTGCACAAAAAGGTGCTCAAAG-TGTGAAAG-TGCAGCCTATAGAAGTAGC 164
|||||||||||||| || ||| ||| || |||| ||| |||||||||| |||||| |
Sbjct 213 CCTCTGAAACTGCACAGAAGGGTCCTC-CAGTTGTG-AAGTTGCAGCCTATTGAAGTA-C 269
Query 165 TGCTATTCTCGC--TGA-TGAACTGATAGAGGCAACTAATGATTTTGGAACAAATTCTCT 221
||||| || | | | |||||| | ||| |||||| ||||||||||| | ||||||||
Sbjct 270 --CTATTATCCCTTTTAGTGAACTCAAAGAAGCAACTGATGATTTTGGATCGAATTCTCT 327
Query 222 TATCGGTGAAGGCTCGTATGCG-AGAGTGTATC-ACGGGGTGTTAAAGAATGGCCAGCCT 279
|||||||||||||| |||| | ||||| || | ||||||| ||||| |||| | ||||
Sbjct 328 CATCGGTGAAGGCTCTTATG-GAAGAGTATA-CTACGGGGTATTAAACAATGATCTGCCT 385
Query 280 GCCGCGGTTAAAAAGTTAGATTCTAACAAACAGCCTGATGAGGAATTTCTTGCCCAGGTT 339
| ||| |||||||||| |||||||||||||||||||| | ||||| ||||| ||||||
Sbjct 386 TCAGCGATTAAAAAGTTGGATTCTAACAAACAGCCTGACAATGAATTCCTTGCTCAGGTT 445
Query 340 TCCATGGTTTCGAGG-TTGAAGCAT-ACTAACTTTGTTGAGCTGCTTGGTTACTCTGTTG 397
||||||||||| ||| || || ||| | |||||||||| | || ||||| |||| |||||
Sbjct 446 TCCATGGTTTCTAGGCTT-AAACATGA-TAACTTTGTTCAACTTCTTGGCTACTGTGTTG 503
Query 398 ATGGGAATTCGCGGATACTTGTCTT-TGAGTTTGCCCAA-AATGGATCTCTTCATGATAT 455
|||||||||| ||||||||| |||| ||| |||| |||| ||||||||||||||||||||
Sbjct 504 ATGGGAATTCACGGATACTT-TCTTATGAATTTG-CCAATAATGGATCTCTTCATGATAT 561
Query 456 TCTTCATGGGAGAAAAGGTGTGAAGGGAGCAAAGCCTGGTCCACTCTTGTCGTGGCATCA 515
|||||||||||||||||||||||| |||||| |||| ||||| ||||||||||| ||||
Sbjct 562 TCTTCATGGGAGAAAAGGTGTGAAAGGAGCACAGCCAGGTCCTGTCTTGTCGTGGTATCA 621
Query 516 ACGAGTGAAGATTGCGGTTGGAGCAGCAAGAGGGCTTGAGTACTTACATGAAAAGGCGAA 575
|||||| || ||||| |||||||| |||||||| ||||||||||| |||||||| || ||
Sbjct 622 ACGAGTCAAAATTGCAGTTGGAGCTGCAAGAGGCCTTGAGTACTTGCATGAAAAAGCTAA 681
Query 576 TCCACATGTCATCCACCGTGACAT-AAAGTCCAGCAACGTTCTAATCTTTGATA-ATGAT 633
||| || |||| ||||||||||| ||| |||||||| || || ||||||| | |||||
Sbjct 682 TCCTCACATCATTCACCGTGACATTAAA-TCCAGCAATGTCCTCCTCTTTGA-AGATGAT 739
Query 634 GTAGCTAAAATTGCTGACTTTGATCTGTCAAATCAAGCTCCTGATATGGCAGCACGCCTT 693
|| || |||||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct 740 GTTGCCAAAATTGCTGACTTTGATCTCTCTAATCAAGCTCCTGATATGGCAGCTCGCCTT 799
Query 694 CATTCAACTCGTGTTCTTGGAACCTTTGGTTACCATGCCCCTGAATATGCAATGACTGGG 753
||||| || || |||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct 800 CATTCCACCCGAGTTCTTGGGACTTTTGGTTACCATGCCCCTGAATATGCAATGACCGGG 859
Query 754 CAACTGAGTGCCAAGAGTGATGTATACAG-TTTCGGAGTTGTACTG-CTCGAGCTTCTTA 811
|| | | ||||||||||||||| ||||| ||| |||||||| || ||||| |||||||
Sbjct 860 CAGTTAAATGCCAAGAGTGATGTCTACAGCTTT-GGAGTTGT-CTTACTCGAACTTCTTA 917
Query 812 CAGGTCGAAAGCCTGTTGATCATACATTGCCTC-GAGGCCAGCAAAGTCTAGTCACATGG 870
|||||||||||||||||||||||| | | || | |||||||||||||| |||||||||||
Sbjct 918 CAGGTCGAAAGCCTGTTGATCATAGACTACC-CAGAGGCCAGCAAAGTTTAGTCACATGG 976
Query 871 GCTACACC-AAAGCTAAGCGAAGACAAGGTTAAGCAGTGTGTTGATTCAAGACTCGGAGG 929
|||||||| ||| || || |||||||||||||| || || |||||| |||||||||| ||
Sbjct 977 GCTACACCTAAA-CTGAGTGAAGACAAGGTTAAACAATGCGTTGATGCAAGACTCGGTGG 1035
Query 930 AGATTACCCTCCAAAAGCTGTTGCTAAG 957
|||||||||||||||||||||||||||
Sbjct 1036 CGATTACCCTCCAAAAGCTGTTGCTAAG 1063
> AT3G17410.1 | Symbols: | Protein kinase superfamily protein
| chr3:5955909-5959106 FORWARD LENGTH=1480
Length=1480
Score = 479 bits (259), Expect = 3e-134
Identities = 608/774 (79%), Gaps = 34/774 (4%)
Strand=Plus/Plus
Query 298 GATTCTAACAAACAGCCTGATGAGGAATTTCTTGCCCAGGTTTCCATGGTTTCGAGGTTG 357
||||||| || || || ||| | |||||||| |||||||| || ||||||||||| |||
Sbjct 459 GATTCTAGTAAGCAACCAGATCAAGAATTTCTCGCCCAGGTATCAATGGTTTCGAGATTG 518
Query 358 AAG-CATACTAACT-TTGTTGAGCTGCTTGGTTACTCTGTTGATGG-GAATTCGCG-GAT 413
| || | || | |||||| ||| || || || | ||||||||| | || || | |
Sbjct 519 -CGACA-AGAAAATGTTGTTGCGCTTCTGGGCTATTGTGTTGATGGCCCACTC-CGTG-T 574
Query 414 ACTTGTCTT-TGAGTTTGC-CCAAAATGGATCTCTTCATGATATTCTTCATGGGAGAAAA 471
|||| ||| ||| | ||| || ||||||||||||||||||||||||||||| |||||
Sbjct 575 TCTTG-CTTATGAATATGCTCC-TAATGGATCTCTTCATGATATTCTTCATGGTCGAAAA 632
Query 472 GGTGTGAA-GGGAGCAAAGCCTGGTCCACT-CTTGTCGTGGCATCA-ACGAGTGAAGATT 528
||||| || ||| ||| |||| ||||| | || ||||||||| || | |||| || |||
Sbjct 633 GGTGTTAAAGGG-GCACAGCCAGGTCCTGTTCT-GTCGTGGCACCAGA-GAGTCAAAATT 689
Query 529 GCGGTTGGAGCAGCAAGAGGGCTTGAGTACTTACATGAAAAGGCGAATCCACATGTCATC 588
|| ||||| || || ||||| || |||||||| ||||| ||||| || || ||||| |||
Sbjct 690 GCTGTTGGTGCGGCTAGAGGACTCGAGTACTTGCATGAGAAGGCAAACCCTCATGTTATC 749
Query 589 CACCGTGACAT-AAAGTCCAGCAACGTTCTAATCT-TT-GATAATGATGTAGCTAAAATT 645
||| | ||||| ||| |||||||| || || ||| || ||| ||||||| || || |||
Sbjct 750 CACAGAGACATCAAA-TCCAGCAATGTACT--TCTGTTCGATGATGATGTTGCCAAGATT 806
Query 646 GCTGACTTTGATCTGTCAAATCAAGCTCCTGATATGGCAGCACGCCTTCATTCAACTCGT 705
||||| |||||| |||| || ||||| ||||| ||||| || |||||||| ||||| |||
Sbjct 807 GCTGATTTTGATTTGTCCAACCAAGCCCCTGACATGGCTGCTCGCCTTCACTCAACCCGT 866
Query 706 GTTCTTGGAACCTTTGGTTACCATGCCCCTGAATATGCAATGACTGGGCAAC-T-GAGTG 763
|| || ||||||||||| || || || || || ||||||||||| ||| | | | |||
Sbjct 867 GTGCTCGGAACCTTTGGCTATCACGCTCCAGAGTATGCAATGACGGGG-A-CGTTGAGCA 924
Query 764 CCAAGAGTGATGTATACAGTTTCGGAGTTGTACTGCTCGAGCTTCTTACAGGTCG-AAAG 822
| ||||||||||| || ||||| || ||||| ||||| ||||| || |||||||| |||
Sbjct 925 CAAAGAGTGATGTCTATAGTTTTGGCGTTGTTCTGCTGGAGCTCCTCACAGGTCGTAAA- 983
Query 823 CCTGTTGATCATACATTGCCTCGAGGCCAGCAAAGTCTAGTCACATGGGCTACACC-AAA 881
|| ||||||||||| || || || || ||||| ||| | || |||||||| || || |||
Sbjct 984 CCAGTTGATCATACCTTACCACGTGGACAGCAGAGTGTCGTGACATGGGCAACCCCTAAA 1043
Query 882 GCTAAGCGAAGACAAGGTTAAGCAGTGTGTTGATTCAAGACTCGGA-GGAGATTACCCTC 940
| || ||||||||||| |||||||||||||| ||||||| | ||||| || ||||
Sbjct 1044 T-TGAGTGAAGACAAGGTGAAGCAGTGTGTTGACGCAAGACTAA-ACGGAGAATATCCTC 1101
Query 941 CAAAAGCTGTTGCTAAGTTAGCTGCTGTTGCTGCATTGTGTGTACAATACGAAGCTGATT 1000
| ||||||||||||||| | ||||| || |||||| ||||||| ||||| || || || |
Sbjct 1102 CCAAAGCTGTTGCTAAGCTGGCTGCGGTAGCTGCACTGTGTGTGCAATATGAGGCAGACT 1161
Query 1001 TCAGACCAAACATGAGTATTGTCGTGAAGGCTCTGCAACCATTGTTGAATGCTC 1054
|||| || |||||||| || || ||||||||||| || || ||| | ||| |||
Sbjct 1162 TCAGGCCTAACATGAGCATAGTGGTGAAGGCTCTTCAGCCGTTGCTCAATCCTC 1215
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53212577700
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5