BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg325159
Length=1599
Score E
Sequences producing significant alignments: (Bits) Value
AT5G05260.1 | Symbols: CYP79A2 | cytochrome p450 79a2 | chr5:15... 2329 0.0
AT5G35917.1 | Symbols: CYP79A3P | cytochrome P450, family 79, s... 1554 0.0
AT5G35920.1 | Symbols: CYP79A4P | cytochrome P450, family 79, s... 499 3e-140
> AT5G05260.1 | Symbols: CYP79A2 | cytochrome p450 79a2 | chr5:1559778-1561765
REVERSE LENGTH=1572
Length=1572
Score = 2329 bits (1261), Expect = 0.0
Identities = 1477/1582 (93%), Gaps = 11/1582 (1%)
Strand=Plus/Plus
Query 19 ATGCTTGCGTTTATTCTAGGTTTGCTTCTCCTTGCATTAACTATGAAGCGTAAGGAGACG 78
||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 1 ATGCTCGCGTTTATTATAGGTTTGCTTCTTCTTGCATTAACTATGAAGCGTAAGGAGAAG 60
Query 79 AAGAAAACCATGTTAATGACTAGCCAC-ACGAGAAACCTCTCTCTCCCTCCCGGGCCGAA 137
||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||
Sbjct 61 AAGAAAACCATGTTAAT---TAGCC-CTACGAGAAACCTCTCTCTCCCTCCCGGGCCGAA 116
Query 138 ATCTTGGCCTCTAATCGGAAACTTACCGGACATACTAGGGAGGAACAGACCGGTGTTCCG 197
|||||||||| ||||||||||| ||||||| |||||||||||||||| ||||||||||||
Sbjct 117 ATCTTGGCCTTTAATCGGAAACCTACCGGAAATACTAGGGAGGAACAAACCGGTGTTCCG 176
Query 198 TTGGATACATTCTCTTATGAAAGAACTCAACACCGATATTGCATGTATCCGTCTTGCCAA 257
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 177 GTGGATACATTCTCTCATGAAAGAACTCAACACCGATATTGCATGTATCCGTCTTGCGAA 236
Query 258 TACTCACGTGATCCCCGTGACATCCCCGAGAATTGCAAGGGAGATTCTGAAGAAGCAAGA 317
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 237 TACTCACGTGATCCCCGTGACATCCCCGAGAATTGCAAGAGAGATTCTGAAGAAGCAAGA 296
Query 318 CTCCCTTTTCGCCACTAGACCACTAACAATGGGGACAGAGTACTGCAGCCGCGGGTACTT 377
|||| |||||||||||||||| ||||| ||||| || |||||||||||||||||||||||
Sbjct 297 CTCCGTTTTCGCCACTAGACCGCTAACGATGGGCACGGAGTACTGCAGCCGCGGGTACTT 356
Query 378 GACTATTGCGGTGGAGCCACAAGGAGAGCAGTGGAAGAAGATGAGGAGAGTGGTGTCATC 437
||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 357 GACCGTTGCGGTGGAGCCACAAGGAGAGCAGTGGAAGAAGATGAGGAGAGTGGTGGCATC 416
Query 438 TCACGTGACGAGCAAGAAGAGCTTCCAATTGACGCTCCAAAAGAGAACCGAAGAGGCTGA 497
|||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct 417 TCACGTGACGAGCAAGAAGAGCTTCCAAATGATGCTACAAAAGAGAACCGAAGAGGCTGA 476
Query 498 TAACTTCGTCCGGTACATCAATAACCGCAGTGTCAAAAACCGTGGTAATGGTAATGGTTA 557
|||||| |||||||||||||||||||| ||||||||||||||||||||| | | ||
Sbjct 477 TAACTTAGTCCGGTACATCAATAACCGTAGTGTCAAAAACCGTGGTAAT-G--CT--TT- 530
Query 558 TGTGGTTATTGATTTAAGGCTTGTGGTGCGGCAATACAGCGGAAATGTAGCTCGGAAGAT 617
||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct 531 TGTGGTTATTGATTTAAGGCTTGCGGTACGGCAATACAGTGGAAATGTAGCTCGGAAGAT 590
Query 618 GATGTTTGGTATAAGGCATTTTGGTAACGGAAGTGAAGATGGATCGGGACCAGGGTTCGA 677
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 591 GATGTTTGGTATAAGGCATTTTGGTAAAGGAAGTGAAGATGGATCGGGACCAGGGTTGGA 650
Query 678 AGAGATTGAACATGTGGAATCTTTGTTTACGGTTTTAACCCATCTTTACGCCTTTGCATT 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 AGAGATTGAACATGTGGAATCTTTGTTTACGGTTTTAACCCATCTTTACGCCTTTGCATT 710
Query 738 GTCAGATTATGTCCCGTGGCTAAGGTTCTTGGACTTGGAAGGGCATGAGAAGATTGTGAG 797
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 711 GTCAGATTATGTCCCGTGGCTAAGGTTCTTGGACTTGGAAGGCCATGAGAAGGTTGTGAG 770
Query 798 TGATGCAATGAGAAAGGTAAGTAAGTATAACGATCCTTTTGTTGATGAAAGACTTATGCA 857
| | ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 771 TAACGCAATGAGAAATGTAAGTAAGTATAACGACCCTTTTGTTGATGAAAGACTCATGCA 830
Query 858 TTGGCGAAATGGGAAGATGAAAGAGCCTCAAGATTTTCTTGACATGTTTATAATGGCAAA 917
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 831 ATGGCGAAATGGGAAGATGAAAGAACCTCAAGATTTTCTTGACATGTTTATAATAGCTAA 890
Query 918 AGACACTGACGGGAAGCCTACTCTGTCGGACGAAGAGATCAAAGCACAAGTGACGGAGCT 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 891 AGACACTGACGGGAAGCCTACTCTGTCGGACGAAGAGATCAAAGCACAAGTGACGGAACT 950
Query 978 AATGTTGGCGACGGTGGATAATCCGTCTAATGCGGCAGAGTGGGCTATGGCGGAGATGAT 1037
||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 951 AATGTTGGCGACGGTTGATAATCCGTCTAACGCGGCAGAGTGGGGTATGGCGGAGATGAT 1010
Query 1038 TAACGAGCCAAGCATCATGCAAAAAGCCGTGGAGGAGATCGATAGGGTAGTTGGAAAAGA 1097
||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1011 TAACGAGCCGAGCATCATGCAAAAAGCCGTGGAAGAGATTGATAGGGTAGTTGGAAAAGA 1070
Query 1098 CCGTCTTGTCCTTGAGTCCGACCTCCCAAATCTCAACTACGTAAAGGCTTGTGTGAAAGA 1157
|||||||||| ||||||| || ||||||||||| ||||| || |||||||||||||||||
Sbjct 1071 CCGTCTTGTCATTGAGTCTGATCTCCCAAATCTTAACTATGTGAAGGCTTGTGTGAAAGA 1130
Query 1158 GGCATTCCGGTTACACCCCGTGGCACCGTTCAACCTCCCTCACATGTCCACCGCTGACGC 1217
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1131 AGCATTCCGGTTACACCCCGTGGCACCGTTCAACCTCCCTCACATGTCCACCACTGATAC 1190
Query 1218 TGAGGTAGACGGTTACTTCATCCCCAAGGGAAGCCATGTGCTGATTAGTCGTATGGGGAT 1277
|| |||||||||||| |||||||||||||||||||| || |||||||||||||||||||
Sbjct 1191 TGTGGTAGACGGTTATTTCATCCCCAAGGGAAGCCACGTATTGATTAGTCGTATGGGGAT 1250
Query 1278 TGGGAGAAACCCTAGCGTATGGGACAAGCCTCTTAAGTTCGACCCGGAGAGACATTTGTT 1337
||||||||| ||||| || ||||||||||| | |||||||||||| ||||||||||||
Sbjct 1251 TGGGAGAAATCCTAGTGTGTGGGACAAGCCGCATAAGTTCGACCCTGAGAGACATTTGAG 1310
Query 1338 CAATAACATAGGCGTGGATCCAAACGAGCCTGATCTCAATATAATATCGTTCAGTGCAGG 1397
|| ||||| | | ||||||| ||||||| ||||||| |||||||||||||||||||||||
Sbjct 1311 CACTAACACATGTGTGGATCTAAACGAGTCTGATCTGAATATAATATCGTTCAGTGCAGG 1370
Query 1398 ACGAAGAGGGTGTATGGGTGTGGACATTGGGTCAGCCATGACGTACATGTTGTTGGCTCG 1457
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1371 ACGAAGAGGTTGTATGGGTGTGGACATTGGGTCAGCCATGACGTACATGTTACTGGCTCG 1430
Query 1458 GTTGATTCAAGGGTTCACGTGGTCACCAGTGCCCGGTGAGAGTAAGATCGATATTTCAGA 1517
|||||||||||| |||||||||| ||||||||| ||| ||| |||||| |||||||||||
Sbjct 1431 GTTGATTCAAGGATTCACGTGGTTACCAGTGCCTGGTAAGAATAAGATTGATATTTCAGA 1490
Query 1518 AAACAAGAATGATCTTTTTATGGCAAAACCATTACACGCGGTTGCAATACCTCGTCTGGC 1577
|| ||||||||||||||||||||||||||||||| |||||||||| | ||||||| | ||
Sbjct 1491 AAGCAAGAATGATCTTTTTATGGCAAAACCATTATACGCGGTTGCCACACCTCGTTTAGC 1550
Query 1578 TCCACATGTGTATCCAACCTAA 1599
||||||||||||||||||||||
Sbjct 1551 TCCACATGTGTATCCAACCTAA 1572
> AT5G35917.1 | Symbols: CYP79A3P | cytochrome P450, family 79,
subfamily A, polypeptide 3 pseudogene | chr5:14049123-14051128
FORWARD LENGTH=1473
Length=1473
Score = 1554 bits (841), Expect = 0.0
Identities = 1003/1082 (93%), Gaps = 8/1082 (1%)
Strand=Plus/Plus
Query 6 CGACTCCACCCCAATGCTTGCGTTTATTCTAGGTTTGCTTCTCCT-TGCATTAACTATGA 64
|||||| ||| |||||||||||||||| ||||||||||||||||| | ||||||| ||||
Sbjct 9 CGACTCTACCTCAATGCTTGCGTTTATCCTAGGTTTGCTTCTCCTAT-CATTAACAATGA 67
Query 65 AGCGTAAGGAGACGAAGAAAACCATGTTAATGACTAGCCACACGAGAAACCTCTCTCTCC 124
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 68 AGCGTAAAGAGACGAAGAAAACCATGTTAATGACTAGCCACACGAGAAACCTCTCTCTTC 127
Query 125 CTCCCGGGCCGAAATCTTGGCCTCTAATCGGAAACTTACCGGACATACTAGGGAGGAACA 184
|||| ||||| |||||||||||| || | |||||| |||| || ||||||||||||||||
Sbjct 128 CTCCGGGGCCAAAATCTTGGCCTTTAGTTGGAAACCTACCAGAAATACTAGGGAGGAACA 187
Query 185 GACCGGTGTTCCGTTGGATACATTCTCTT-ATGAAAGAACTCAACACCGATATTGCATGT 243
|||||||||||| ||||||||||| || ||| ||||||||||||||||||||||||||
Sbjct 188 AACCGGTGTTCCGGTGGATACATTC-ATTGATGGAAGAACTCAACACCGATATTGCATGT 246
Query 244 ATCCGTCTTGCCAATACTCACGTGATCCCCGTGACATCCCCGAGAATTGCAAGGGAGATT 303
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 ATCCGTCTTGCGAATACTCACGTGATCCCCGTGACATCCCCGAGAATTGCAAGGGAGATT 306
Query 304 CTGAAGAAGCAAGACTCCCTTTTCGCCACTAGACCACTAACAATGGGGACAGAGTACTGC 363
|||||||||||||||||| ||||||||| |||||| |||||||||||||| ||||| |||
Sbjct 307 CTGAAGAAGCAAGACTCCGTTTTCGCCATTAGACCGCTAACAATGGGGACGGAGTATTGC 366
Query 364 AGCCGCGGGTACTTGACTATTGCGGTGGAGCCACAAGGAGAGCAGTGGAAGAAGATGAGG 423
||||||||||||||||| ||||||||| || ||||||||||||||||||| |||||||||
Sbjct 367 AGCCGCGGGTACTTGACCATTGCGGTGCAGTCACAAGGAGAGCAGTGGAAAAAGATGAGG 426
Query 424 AGAGTGGTGTCATCTCACGTGACGAGCAAGAAGAGCTTCCAATTGACGCTCCAAAAGAGA 483
||||||||| ||||||||||||| ||||||||||||||| |||||| ||| ||||||||
Sbjct 427 AGAGTGGTGGCATCTCACGTGACAAGCAAGAAGAGCTTCAAATTGATGCTTGAAAAGAGA 486
Query 484 ACCGAAGAGGCTGATAACTTCGTCCGGTACATCAATAACCGCAGTGTCAAAAACCGTGGT 543
||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct 487 ACCGAAGAGGCAGATAACTTAGTCCGGTACATCAATAACCGCTGTGTCAAAAACCGTGGT 546
Query 544 AATGGTAATGGT-TATGTGGTTATTGATTTAAGGCTTGTGGTGCGGCAATACAGCGGAAA 602
|||||||||||| | || ||||||||||||||| ||||||| || ||||||||||| ||
Sbjct 547 AATGGTAATGGTCT-TGCGGTTATTGATTTAAGATTTGTGGTACGACAATACAGCGGGAA 605
Query 603 TGTAGCTCGGAAGATGATGTTTGGTATAAGGCATTTTGGTAACGGAAGTGAAGATGGATC 662
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||
Sbjct 606 TGTAGCTCGGAAGATGATGTTTGGTATACGGCATTTTGGTAAAGGAAGTGAAGATGAATC 665
Query 663 GGGACCAGGGTTCGAAGAGATTGAACATGTGGAATCTTTGTTTACGGTTTTAACCCATCT 722
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 666 GGGACCAGGGTCCGAAGAGATTGAACATGTCGAATCTTTGTTTACGGTTTTAACCCATCT 725
Query 723 TTACGCCTTTGCATTGTCAGATTATGTCCCGTGGCTAAGGTTCTTGGACTTGGAAGGGCA 782
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||
Sbjct 726 TTACGCCTTTGCATTGTCGGATTATGTCCCGTGGTTAAGGTTCTTGGACTTGGAAGGCCA 785
Query 783 TGAGAAGATTGTGAG-TGATGCAATGAGAAAGGTAAGTAAGTATAACGATCCTTTTGTTG 841
||||||| ||||| | ||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct 786 TGAGAAGGTTGTG-GCTGACGCAATGAGAAATGTAAGTAAGTATAACGATCCTTTTGTCG 844
Query 842 ATGAAAGACTTATGCATTGGCGAAATGGGAAGATGAAAGAGCCTCAAGATTTTCTTGACA 901
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 845 ATGAAAGACTCATGCAATGGCGAAATGGGAAGATGAAAGAGCCTCAAGATTTTCTCGACA 904
Query 902 TGTTTATAATGGCAAAAGACACTGACGGGAAGCCTACTCTGTCGGACGAAGAGATCAAAG 961
||||||||||||| |||||||| |||| ||||||||||| ||||| |||||||||||||
Sbjct 905 TGTTTATAATGGCGAAAGACACCAACGGAAAGCCTACTCTATCGGAAGAAGAGATCAAAG 964
Query 962 CACAAGTGACGGAGCTAATGTTGGCGACGGTGGATAATCCGTCTAATGCGGCAGAGTGGG 1021
||||||||||||| ||||||||||| || || |||||||||||||||||||| |||||||
Sbjct 965 CACAAGTGACGGAACTAATGTTGGCTACAGTAGATAATCCGTCTAATGCGGCGGAGTGGG 1024
Query 1022 CTATGGCGGAGATGATTAACGAGCCAAGCATCATGCAAAAAGCCGTGGAGGAGATCGATA 1081
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1025 CTATGGCGGAGATGATTAACGAGCCGAGCATCATGCAAAAAGCTGTGGAGGAGATCGATA 1084
Query 1082 GG 1083
||
Sbjct 1085 GG 1086
> AT5G35920.1 | Symbols: CYP79A4P | cytochrome P450, family 79,
subfamily A, polypeptide 4 pseudogene | chr5:14056437-14056904
FORWARD LENGTH=468
Length=468
Score = 499 bits (270), Expect = 3e-140
Identities = 388/447 (87%), Gaps = 0/447 (0%)
Strand=Plus/Plus
Query 1151 TGAAAGAGGCATTCCGGTTACACCCCGTGGCACCGTTCAACCTCCCTCACATGTCCACCG 1210
|||||||||||||||||||||| | ||||| || |||||||||||||||||||||||
Sbjct 20 TGAAAGAGGCATTCCGGTTACATCATGTGGCGCCATTCAACCTCCCTCACATGTCCACTA 79
Query 1211 CTGACGCTGAGGTAGACGGTTACTTCATCCCCAAGGGAAGCCATGTGCTGATTAGTCGTA 1270
|||| | || ||| || |||||||||||||||||||||||||| ||| ||||||||||
Sbjct 80 CTGATGTTGTGGTGGATGGTTACTTCATCCCCAAGGGAAGCCACAAGCTTATTAGTCGTA 139
Query 1271 TGGGGATTGGGAGAAACCCTAGCGTATGGGACAAGCCTCTTAAGTTCGACCCGGAGAGAC 1330
||||||| ||||||||||||| || |||||||| || |||||||| || || |||||||
Sbjct 140 TGGGGATCGGGAGAAACCCTAAAGTGTGGGACAAACCGCTTAAGTTTGATCCTGAGAGAC 199
Query 1331 ATTTGTTCAATAACATAGGCGTGGATCCAAACGAGCCTGATCTCAATATAATATCGTTCA 1390
|||| |||||||| | | || || | ||| ||||||||||||||||||||| |||||
Sbjct 200 ATTTAAGCAATAACACATGTGTAGAACTAAAAGAGCCTGATCTCAATATAATAACGTTCG 259
Query 1391 GTGCAGGACGAAGAGGGTGTATGGGTGTGGACATTGGGTCAGCCATGACGTACATGTTGT 1450
|||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 260 GTGCAGAAAGACGAGGGTGTATGGGTGCGGACATTGGGTCAGCCATGACGTACATGTTGG 319
Query 1451 TGGCTCGGTTGATTCAAGGGTTCACGTGGTCACCAGTGCCCGGTGAGAGTAAGATCGATA 1510
||||||||||||||||||||||||||||||||||||| ||| |||| ||||| || ||||
Sbjct 320 TGGCTCGGTTGATTCAAGGGTTCACGTGGTCACCAGTACCCAGTGAAAGTAAAATTGATA 379
Query 1511 TTTCAGAAAACAAGAATGATCTTTTTATGGCAAAACCATTACACGCGGTTGCAATACCTC 1570
|||||| || ||||| ||||||||||||||||||||| ||| | ||||||| || |||||
Sbjct 380 TTTCAGTAAGCAAGAGTGATCTTTTTATGGCAAAACCCTTAAATGCGGTTGTAACACCTC 439
Query 1571 GTCTGGCTCCACATGTGTATCCAACCT 1597
|| ||| |||| ||||||||||| |||
Sbjct 440 GTTTGGATCCAAATGTGTATCCAGCCT 466
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78965457285
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5