BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325255 Length=1479 Score E Sequences producing significant alignments: (Bits) Value AT3G13640.1 | Symbols: ATRLI1, RLI1 | RNAse l inhibitor protein... 130 4e-29 > AT3G13640.1 | Symbols: ATRLI1, RLI1 | RNAse l inhibitor protein 1 | chr3:4458461-4461733 REVERSE LENGTH=2197 Length=2197 Score = 130 bits (70), Expect = 4e-29 Identities = 112/132 (85%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 733 AGATACAAATATCCGAACATGAGTATAAC-CCTTGGAGATTTCAAGCTGGAAGTGATGGA 791 ||||||||||| || || |||| || | | ||||||||||||||||||||||||||||| Sbjct 1140 AGATACAAATACCCAAATATGACTA-AGCAACTTGGAGATTTCAAGCTGGAAGTGATGGA 1198 Query 792 AGGGGAGTTCACAGACTGTCAGGTT-TCTGTAGTGCTGGGAGAGAGCGGTTCAGGGAAGA 850 ||||||||||||||||| |||| || || ||| |||| ||||||| ||| ||||||| | Sbjct 1199 AGGGGAGTTCACAGACTCTCAGATTATC-GTAATGCTTGGAGAGAATGGTACAGGGAAAA 1257 Query 851 CCACCTTCCTCC 862 | |||||| ||| Sbjct 1258 CGACCTTCATCC 1269 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72941391885 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5