BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325380 Length=1437 Score E Sequences producing significant alignments: (Bits) Value AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:2... 2338 0.0 > AT5G07670.1 | Symbols: | RNI-like superfamily protein | chr5:2430146-2432196 FORWARD LENGTH=1837 Length=1837 Score = 2338 bits (1266), Expect = 0.0 Identities = 1384/1440 (96%), Gaps = 12/1440 (1%) Strand=Plus/Plus Query 1 ATGTCTTATAATACGGGGAAGAAGGAGAGTAGTCCAGTTTCGCCATTGAAGAAGCGACGA 60 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 276 ATGTCTTATAATAC-GGG--GAAGGAGAGTAGTCCAGTTTCGCCATTGAAGAAGCGACGA 332 Query 61 GCGAGCTGGTCGGAACTTTGGGTTAACCATCACCAGTTATTGTCTTCTTCGCCGCTTGAT 120 || |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 333 GCAAGCTGGTCGGAACTTTGGGTTAACCATCACCACTTATTGTCTTCTTCGCCCCTTGAT 392 Query 121 TTTGCCGCAAAGTTTCAGTCTTTGACTCCTCCAATCTCCAAATCCAAAACCCTACTTCCT 180 || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 393 TTAGCCGCAAAGTTTCAGTCTTTGACTCCTCCTATCTCCAAATCCAAAACCCTACTTCCT 452 Query 181 GATTTCACGCTTCTCTTACCTGACCTCATTCTCATCAGAGTCATTGAGAAAATCCCTAAA 240 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 453 GATTTCACGCTTCTCTTACCTGACCTCATTCTCATCAGAGTCATTCAGAAAATCCCTAAT 512 Query 241 TCTCAACGGAAAAATCTCTCTTTGGTTTGTAAGAGATGGTTTAAACTCCATGGTCGTCTT 300 |||||||||||||||||||| ||||| || ||||||||||||| |||||||||||||||| Sbjct 513 TCTCAACGGAAAAATCTCTCCTTGGTATGCAAGAGATGGTTTAGACTCCATGGTCGTCTT 572 Query 301 GTACGGTCTTTTAAGGTTTCGGATTGGGAATTTCTAGCGTCTGGTCGGCTGATTTCGAGG 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 573 GTACGGTCTTTTAAGGTTTCGGATTGGGAATTTCTATCGTCTGGTCGGCTGATTTCGAGG 632 Query 361 TTTCCCAATCTGGACACTGTTGATTTGGTCAGTGGGTGTTTAATTTCGCCGCCAAATTCA 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct 633 TTTCCCAATCTGGAGACTGTTGATTTGGTCAGTGGGTGTTTAATTTCGCCGCCAAATTTA 692 Query 421 GGTATTTTAGTTAACCACAGGATAGTTTCGTTTACTGTTGGTGTAGGGTCTTATCAGAGT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 693 GGTATTTTAGTTAACCACAGGATAGTTTCGTTTACTGTTGGTGTAGGGTCTTATCAGAGT 752 Query 481 TGGAGTTTCTTTGAGGAGAATTTGTTGTCTGTTG-ATATAGTTGAGAGAGGGCTTAAAGC 539 |||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||| Sbjct 753 TGGAGTTTCTTTGAGGAGAATTTGTTGTCTGTTGAAT-TAGTTGAGAGAGGGCTAAAAGC 811 Query 540 TCTTGCTGGTGGTTGCTCTAATCTCCGGAAACTCGTAGTGACCAATACTAGTGAATTAGG 599 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 812 ACTTGCTGGTGGTTGCTCTAATCTCCGGAAACTCGTAGTGACGAATACTAGTGAATTAGG 871 Query 600 GTTGTTGAATGTAGCTGAAGAGTGTTCCAGGTTGCAAGAACTCGAATTGCACAAGTGTTC 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 872 GTTGTTGAATGTAGCTGAAGAGTGTTCCAGGTTGCAAGAACTCGAATTGCACAAGTGTTC 931 Query 660 TGATAGTGTTTTGCTTGGCATTGGTGCGTTTGAGAATCTGCAGATCTTGAGATTGGTTGG 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 932 TGATAGTGTTTTGCTTGGCATTGGTGCGTTTGAGAATCTGCAGATCTTGAGATTGGTTGG 991 Query 720 GAATGTCGATGGTTTGTATAACTCTTTGGTTTCGGATATCGGATTGATGATTTTGGCTCA 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 992 GAATGTCGATGGTTTGTATAACTCTTTGGTTTCGGATATCGGATTGATGATTTTGGCTCA 1051 Query 780 AGGGTGCAAGAGACTGGTAAAGCTTGAACTCGTTGGATGCGAGGGAGGATTTGACGGGAT 839 |||||| ||||||||||| |||||||| || |||||||| |||||||||||||||||||| Sbjct 1052 AGGGTGTAAGAGACTGGTGAAGCTTGAGCTTGTTGGATGTGAGGGAGGATTTGACGGGAT 1111 Query 840 TAAAGAGATAGGTGAGTGTTGTCAAATGCTTGAGGAACTCACTCTTTGCGATCATAAGAT 899 ||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| Sbjct 1112 TAAAGAGATAGGTGAGTGTTGTCAAATGCTTGAGGAACTCACTGTTTGTGATAATAAGAT 1171 Query 900 GGAGTCGGGTTGGCTTGGAGGTCTTCGATATTGTGAGAATCTCAAGACGCTGAAACTCGT 959 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1172 GGAGTCGGGTTGGCTTGGAGGTCTTCGATATTGTGAGAATCTCAAGACTCTGAAACTCGT 1231 Query 960 GTCTTGTAAAAAGATCGATAATGATCCAGATGAGTGCTTGAGTTGTTGTTGTTGTCCTGC 1019 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct 1232 TTCTTGTAAAAAGATCGATAATGATCCAGATGAGTCCTTGAGTTGTTGTTGT---CCTGC 1288 Query 1020 TCTCGAGCGATTACACTTGGAGAAGTGTCAATTAAGAGATAAGAATACCTTAAAGGCTTT 1079 |||||||||||| || |||||||||||||| |||||||||||||||||| |||||||||| Sbjct 1289 TCTCGAGCGATTGCAGTTGGAGAAGTGTCAGTTAAGAGATAAGAATACCGTAAAGGCTTT 1348 Query 1080 GTTTAAGATGTGTGAAGCAGCGAGAGAGATTGTTTTCCAAGATTGTTGGGGATTGGATAA 1139 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1349 GTTTAAAATGTGTGAAGCAGCGAGAGAGATTGTTTTCCAAGATTGTTGGGGATTGGATAA 1408 Query 1140 TGATATATTCAGCTTGGCATTGGCTTGCGGGAGAGTGAAGCT-TCTGTATCTAGAAGGAT 1198 ||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||| Sbjct 1409 TGATATATTCAGCTTGGCAATGGCTTTCGGGAGAGTGAAGCTGT-TGTATCTAGAAGGAT 1467 Query 1199 GCTCATTGCTAACAACATCATGTCTAGAATCCGTGATTCTACATTGGCACGAGCTCGAAC 1258 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1468 GCTCATTGCTAACAACATCAGGTCTAGAATCCGTGATTCTACATTGGCACGAGCTCGAAC 1527 Query 1259 ATCTGAAAGTGGTTTCATGCAAGAACATAAAAGATTCGGAAGTCTCTCCGTCGCTGTCTG 1318 |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| | Sbjct 1528 ATCTGAAAGTAGTTTCATGCAAGAACATAAAAGATTCAGAAGTCTCTCCTTCGCTGTCAG 1587 Query 1319 CTCTGTTCTCAGCTTTAGTAGAATTGCAGTGGAGACCAGACACCAGATCCCATCTCTCTT 1378 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1588 CTCTGTTCTCAGCATTAGTAGAATTGCAGTGGAGACCAGACACCAGATCCCATCTCTCTT 1647 Query 1379 CAAGCCTTACAGGGACCGGAATTGGGGGGAAAGGCGG-AAAGTTTTTCAAGAAAACATGA 1437 ||||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||| Sbjct 1648 CAAGCCTTACAGGGACCGGAATTGGGGAAAAAGGTGGGAAA-TTTTTCAAGAAAACATGA 1706 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70832968995 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5