BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg325615
Length=1428
Score E
Sequences producing significant alignments: (Bits) Value
AT5G10770.1 | Symbols: | Eukaryotic aspartyl protease family p... 2180 0.0
AT5G10760.1 | Symbols: | Eukaryotic aspartyl protease family p... 483 3e-135
> AT5G10770.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr5:3403110-3405448 REVERSE LENGTH=1763
Length=1763
Score = 2180 bits (1180), Expect = 0.0
Identities = 1346/1428 (94%), Gaps = 3/1428 (0%)
Strand=Plus/Plus
Query 1 ATGAGCATAAATAGGAATTTGTTGAATATCATAGTTGTCCTTTGTGTATGTCTCAATTTG 60
|||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||||
Sbjct 118 ATGAGCATAAATAGGAATCTGTTGAATATCATAATAATCCTTTGTATATGTCTCAATTTG 177
Query 61 GGTTGTAACGAGGGAGCTCAAGAAAGAGAGATTGATGATTCTCATACAATCCAAGTCAGC 120
||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 178 GGTTGTAACGATGGAGCTCAAGAAAGAGAGA---CTGATTCTCATACTATCCAAGTCAGC 234
Query 121 TCTCTCTTCCCACCATCATCATCATCTTGTGTTCTTTCTCCCAGAGCGTCTACTACAAAG 180
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 TCTCTCCTCCCTTCATCATCATCATCTTGTGTTCTTTCTCCCAGAGCGTCTACTACAAAG 294
Query 181 TCCTCACTGCACGTGACGCATAGGCACGGCACGTGCTCGCGTCTAAACAATGGCAAAGCC 240
|| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 295 TCTTCACTGCACGTGACGCATAGACACGGCACGTGTTCGCGTCTAAACAATGGCAAGGCC 354
Query 241 ACGAGTCCAGACCATGTCGAGATCCTAAGACTCGACCAGGCTCGCGTAAACTCCATCCAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 355 ACGAGTCCAGACCATGTCGAGATCCTAAGACTCGACCAGGCTCGCGTAAACTCAATCCAC 414
Query 301 TCAAAACTGTCGAAGAAACTCACAACAAATCACGTCAGTCAAAGCCAGTCAACGGATCTA 360
|||||||| |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||
Sbjct 415 TCAAAACTATCGAAGAAACTCGCAACAGATCACGTCAGTGAAAGCAAGTCAACGGATCTA 474
Query 361 CCGGCTAAAGACGGAAGCACACTCGGTTCAGGTAACTACATCGTGACGGTCGGACTCGGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 475 CCGGCTAAAGACGGAAGCACACTCGGTTCAGGTAACTACATCGTGACGGTCGGCCTCGGG 534
Query 421 ACACCAAAGAACGATCTATCACTAATCTTCGACACCGGAAGCGATTTAACGTGGACTCAA 480
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 535 ACACCAAAGAACGATCTATCACTAATCTTCGACACTGGAAGCGATTTAACGTGGACTCAG 594
Query 481 TGTCAGCCATGTGTTCGAACTTGCTATGACCAAAAGGAACCAATCTTTAACCCTTCTAAG 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 595 TGTCAGCCATGTGTTCGAACTTGCTATGACCAGAAGGAACCAATCTTTAACCCTTCTAAG 654
Query 541 TCTACTTCTTACTACAACGTCTCCTGTTCATCATCAGCGTGTGGTTCCCTCTCTTCAGCT 600
|||||||||||||||||||| ||||| ||||| | ||||||||||| |||||||| |||
Sbjct 655 TCTACTTCTTACTACAACGTATCCTGCTCATCGGCTGCGTGTGGTTCTCTCTCTTCTGCT 714
Query 601 ACAGGAAACGCCGGAAGTTGTTCGGCTTCGAATTGCATCTACGGTATTCAATACGGCGAT 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 715 ACAGGAAACGCCGGAAGCTGTTCGGCTTCGAATTGCATCTACGGTATTCAATACGGCGAT 774
Query 661 CAATCATTCTCCATCGGGTTTCTCGCCAAGGATAAATTTACACTAACGAGCTCCGACGTA 720
||||| |||||| |||| |||||||||||||| || ||||||||||||| ||||||||||
Sbjct 775 CAATCGTTCTCCGTCGGATTTCTCGCCAAGGAGAAGTTTACACTAACGAACTCCGACGTA 834
Query 721 TTTGACGGTGTTTATTTCGGTTGTGGTGAGAACAACCAAGGACTTTTCACCGGTGTCGCC 780
|||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 835 TTTGACGGCGTTTATTTCGGTTGCGGCGAGAACAACCAAGGACTTTTCACCGGTGTCGCC 894
Query 781 GGACTTCTCGGTCTCGGCCGTGACAAGCTTTCATTTCCGTCGCAGACGGCTACGGCTTAC 840
|||||||||||||| || |||||||||||||| ||||||||||||||||| |||||||||
Sbjct 895 GGACTTCTCGGTCTTGGTCGTGACAAGCTTTCGTTTCCGTCGCAGACGGCAACGGCTTAC 954
Query 841 AATAAAATCTTCTCTTACTGTCTCCCTTCATCCGCAAGCTATACCGGACATCTCACCTTC 900
||||| |||||||||||||| |||||||| ||||| ||||| |||||||||||||| |||
Sbjct 955 AATAAGATCTTCTCTTACTGCCTCCCTTCCTCCGCTAGCTACACCGGACATCTCACATTC 1014
Query 901 GGATCCGCCGGAATCTCCAGATCCGTCAAATTCACGCCGATTTCAACCATCACTGATGGA 960
|||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 1015 GGATCCGCCGGAATCTCCAGATCCGTTAAATTCACACCAATTTCAACCATCACTGATGGA 1074
Query 961 ACCTCGTTCTACGGCCTTAATATCGTTGCAATCACCGTCGGCGGTCAAAAACTGCCGATT 1020
|| || |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct 1075 ACTTCCTTCTACGGCCTTAATATCGTCGCAATCACCGTCGGCGGTCAGAAATTGCCGATT 1134
Query 1021 CCTTCAACCGTGTTCTCAACTCCGGGAGCTTTAATCGATTCAGGAACCGTTATCACTCGT 1080
|||||||| || ||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct 1135 CCTTCAACTGTATTCTCTACTCCGGGAGCTTTAATCGATTCCGGCACCGTTATCACTCGT 1194
Query 1081 CTCCCGCCGAAAGCTTACGCGGCGTTACGAAGCTCGTTCAAGGCGAAGATGTCAAAGTAT 1140
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1195 CTCCCGCCGAAAGCCTACGCGGCGTTAAGAAGCTCGTTCAAGGCGAAGATGTCAAAGTAT 1254
Query 1141 CCGACCACGTCAGGCGTCTCGATCTTGGACACGTGTTTCGATCTCAGCGGATTTAAGACG 1200
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1255 CCGACCACGTCGGGCGTCTCGATCTTGGACACGTGTTTCGATCTCAGCGGGTTTAAGACG 1314
Query 1201 GTGACGATCCCGAAAGTGGCGTTCTCTTTCAGCGGTGGCGCCGTCGTGGAACTTGGCTCA 1260
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1315 GTGACTATCCCGAAAGTGGCGTTCTCTTTCAGCGGTGGCGCCGTCGTGGAGCTTGGTTCG 1374
Query 1261 AAAGGAATATTTTACGCGTTTAAGATATCACAGGTTTGTTTGGCGTTTGCAGGGAATAGC 1320
||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 1375 AAAGGGATATTTTACGTGTTTAAGATATCTCAGGTTTGTCTGGCGTTTGCAGGGAATAGC 1434
Query 1321 GATGACAGTAACGCTGCCATCTTTGGAAACGTTCAGCAGCAAACGCTAGAAGTTGTGTAC 1380
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1435 GATGACAGTAACGCTGCCATCTTTGGAAACGTTCAGCAGCAAACGCTAGAAGTTGTGTAT 1494
Query 1381 GATGGTGCGGGTGGGCGGGTCGGGTTTGCTCCAAATGGGTGTAGTTAA 1428
||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1495 GATGGTGCGGGTGGGCGGGTCGGGTTTGCTCCAAACGGGTGTAGTTAA 1542
> AT5G10760.1 | Symbols: | Eukaryotic aspartyl protease family
protein | chr5:3400342-3402207 REVERSE LENGTH=1766
Length=1766
Score = 483 bits (261), Expect = 3e-135
Identities = 1096/1478 (74%), Gaps = 142/1478 (10%)
Strand=Plus/Plus
Query 1 ATGAGCATAAAT-AGGAATTTGTTGAATATCATAGTTGTCCTTTGTGTATGTCTCAATTT 59
|||||||| ||| |||||||| |||| ||| ||| || | ||||| ||||||||||| ||
Sbjct 43 ATGAGCAT-AATGAGGAATTTCTTGAGTATGATAATTATGCTTTGCGTATGTCTCAA-TT 100
Query 60 GG-GTTGTAAC-GAGGGAGCTCAAG-AAA--G--AG-AG-ATTG-A--TGATTCTCATAC 107
|| ||| | | || |||||| || ||| | || | | | | ||||||| | ||
Sbjct 101 GGTGTT-TTGCTGAAGGAGCT-GAGAAAAGCGATAGTGGAAAGGTACTTGATTCTTACAC 158
Query 108 AATCCAAGTCAGCTCTCTCTTCCCACCATCATCATCATCTTGTGTTCTTTCTCCCAGAGC 167
|| |||||||||||||| || | || ||||||||||||||||| | |||| | | |||
Sbjct 159 CATTCAAGTCAGCTCTCTGTT--C-CCTTCATCATCATCTTGTGTCCCTTCTTCAAAAGC 215
Query 168 GTCTACTACAAAGTCCTCACTGCACGTGACGCATAGGCACGGCACGTGCTCGCGTCTAAA 227
|||| ||| ||||| || |||| |||| ||| | ||| || ||||||||| ||| |
Sbjct 216 ATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCTCGCATCTTAG 275
Query 228 CAATGGCAAAGCCACGAGTCCAGACCATGTCGAGATCCTAAGACTCGACCAGGCTCGCGT 287
| | || | || | |||| | ||||||| ||| ||| | |||| ||| || || || ||
Sbjct 276 C-A--GCGATGCGA-GAGT-C-GACCATGACGAAATCATCAGACGCGATCAAGCACGTGT 329
Query 288 AAACTCCATCCACTCAAAACTGTCGAAGAAACTCA-CAACAAATCACGTCAGTCAAAGCC 346
| |||||| |||||||| |||| ||| || | | | ||||| | ||||| | |||||
Sbjct 330 GGAGTCCATCTACTCAAAATTGTCAAAG-AA-T-AGC-GCAAATGAAGTCAG-CGAAGCC 384
Query 347 -AGTCAACGGATCTACCGGCT-AAAGACGGAAGCACACTCGGTTCAGGTAACTACATCGT 404
|||||||||| ||||||||| |||| |||| ||||||||| ||||| |||||||||||
Sbjct 385 AAGTCAACGGAGCTACCGGCTAAAAG-TGGAATCACACTCGGATCAGGAAACTACATCGT 443
Query 405 GACGGTCGGACTCGGGACACCAAAGAACGATCTATCACTAATCTTCGACACCGGAAGCGA 464
|| ||||| |||||||||| ||| |||||||||| || |||||||||||||||| ||
Sbjct 444 AACAATCGGAATCGGGACACCGAAGCACGATCTATCGCTGGTCTTCGACACCGGAAGTGA 503
Query 465 TTTAACGTGGACTCAATGTCAGCCATGTGTTCGAACTTGCTA-TGACCAAAAGGAACCAA 523
| || |||||||||||| |||||||| | ||| |||||| | | |||||||||||||
Sbjct 504 CCTGACATGGACTCAATGTGAGCCATGTCTAGGAAGTTGCTATTCA-CAAAAGGAACCAA 562
Query 524 TCTTTAACCCTTCTAAGTCTACTTCTTACTACAACGTCTCCTGTTCATCAT-CAGCGTGT 582
|||||||||||| |||| || ||||| | |||||||| || ||||| | || |||
Sbjct 563 AATTTAACCCTTCTTCGTCTTCTACTTACCAAAACGTCTCGTGCTCATC-TCCA--ATGT 619
Query 583 GGTTCCCTCTCTTCAGCTACAGGAAACGCCGGA-AGTTGTTCGGCTTCGAATTGCATCTA 641
| | | | | | ||| | || |||||||||||||| || ||| | ||
Sbjct 620 -G----------T--G--A-A-G--ACG-CTGAGAGTTGTTCGGCTTCCAACTGCGTATA 659
Query 642 CGGTATTC-AATACGGCGATCAA-TC-ATT-CTCCATCGGGTTTCTCGCCAAGGATAAAT 697
| ||| || ||||||||| || || || | ||| || ||||| || ||||| ||||
Sbjct 660 CAGTA-TCGTTTACGGCGAT-AAGTCGTTTAC-CCA-AGGATTTCTTGCAAAGGAGAAAT 715
Query 698 TTACACTAACGAGCTCCGACGTATTT-GACGG-TGTTTA-TTTCGGTTGTGGTGAGAACA 754
|||| ||||||| ||| || || ||| || || |||||| ||| ||||| ||||| ||||
Sbjct 716 TTACCCTAACGAACTCTGATGT-TTTGGA-GGATGTTTACTTT-GGTTGCGGTGAAAACA 772
Query 755 ACCAAGGACTTTTC-ACCGGTGTCGCCGGACTTCTCGGTCTCGGCCGTGACAAGCTTTCA 813
|||||||||||||| | |||||| || || |||||||| || |||| || ||| || |||
Sbjct 773 ACCAAGGACTTTTCGA-CGGTGTTGCTGGGCTTCTCGGCCTTGGCCCTGGCAAACTCTCA 831
Query 814 TTTCCGTCGCAGACGGCTACGGCTTACAATAAAATCTTCTCTTACTGTCTCCCTTCATCC 873
| ||| |||| || | ||| | ||||| || |||||||| |||||||| ||||| | |
Sbjct 832 CTACCGGCGCAAACAACAACGACCTACAACAATATCTTCTCCTACTGTCTACCTTCTTTC 891
Query 874 GCAAGCT---A-TACCGGACATCTCACCTTCGGATCCGCCGGAATCTCCAG-ATCCGTCA 928
|||| | | ||| || ||||| ||||| |||||||| ||||||| | | |||||| |
Sbjct 892 ACAAG-TAACAGTACTGGCCATCTTACCTTTGGATCCGCTGGAATCT-CTGAATCCGTTA 949
Query 929 AATTCACGCCGATTTCAACCATCACTGATG-GAACCTCGTTCTACGGCCTTAATATCGTT 987
||||||| |||||||| || || | | | | | || | || ||| | ||||| |
Sbjct 950 AATTCACACCGATTTCTTCCTTC-C-CAAGCGCA-TTCAAT-TATGGCATCGATATCATA 1005
Query 988 GCAATCACCGTCGGCGGTCAA-AAACT-GCCGATTCCTTCAACCGT-GTTCTCAACTCCG 1044
| |||| || ||| | ||| || | | ||||| || ||| | | ||||| | |||
Sbjct 1006 GGTATCAGTGTAGGC-GACAAGGAATTAG-CGATTACTCCAAAC-TCATTCTCGA--CCG 1060
Query 1045 --GGAGCTTTAATCGATTCAGGAACCGT-TATCACTCGTCTCCC-GCCGAAAGCT-TACG 1099
|| ||| ||||||| ||||| || || | | ||||| ||||| || |||| | ||||
Sbjct 1061 AAGGTGCTATAATCGACTCAGGCACAGTGT-TTACTCGCCTCCCTACC-AAAG-TCTACG 1117
Query 1100 CGGCGTTACGAAGCTCG--TTCAAGGCGAAGATGTCAAAG-TATC-CGACCACGTCAGGC 1155
||| | || || | | || |||| |||||||| || || | || ||||| ||
Sbjct 1118 CGGAACTCCGCAG-T-GTTTTTAAGGAAAAGATGTC-GAGTTA-CAAGAGTACGTC-GG- 1171
Query 1156 G-T-CTCGATCTTGGACACGTGTTTCGATCTCAGC-GGATTTAAGACGGTGACGAT-CCC 1211
| | | | | || ||||| |||| |||| ||| | || || | |||||||| || |||
Sbjct 1172 GATACGGGCTTTTTGACACATGTTACGATTTCA-CTGGCTTGGATACGGTGAC-ATACCC 1229
Query 1212 GAAAG-TGGCGTTCTCTTTCAG-CGGTGGCGCCGTCGTGGAACTTGGCT-CAAAAGGAAT 1268
| | | | || ||||| ||| | |||| || | ||||| |||||| | | | ||| ||
Sbjct 1230 G-ACGATTGCATTCTCCTTC-GCCGGTAGCACTGTCGTAGAACTT-GATGGATCAGGGAT 1286
Query 1269 ATT--TTACGCGTTTAAGATATCACAGGTTTGTTTGGCGTTTGCAGGGAATAGCGATGAC 1326
|| || | || | |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1287 -TTCGTTGC-CGATCAAGATATCACAGGTTTGTTTGGCGTTTGCAGGGAAT---GATGAC 1341
Query 1327 AGTAACGCTGCCATCTTTGGAAACGTTCAGCAG-CAAACGCTAGAAGTTGTGTACGATGG 1385
| | | |||||||||||||||||||||||| | | ||||||| ||||||||||| |
Sbjct 1342 -CT-TC-CCGCCATCTTTGGAAACGTTCAGCAGACGA-CGCTAGATGTTGTGTACGACG- 1396
Query 1386 TG-CGGGTGGGCGGGTCGGGTTTGCTCCAAATGGGTGT 1422
|| | ||||| || ||||| |||||||| ||||| |||
Sbjct 1397 TGGCTGGTGGACGAGTCGGTTTTGCTCCCAATGGTTGT 1434
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70381164090
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5