BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg325650
Length=2754
Score E
Sequences producing significant alignments: (Bits) Value
AT5G11210.1 | Symbols: ATGLR2.5, GLR2.5 | glutamate receptor 2.... 3770 0.0
AT5G11180.1 | Symbols: ATGLR2.6, GLR2.6 | glutamate receptor 2.... 2222 0.0
> AT5G11210.1 | Symbols: ATGLR2.5, GLR2.5 | glutamate receptor
2.5 | chr5:3571214-3574537 REVERSE LENGTH=2490
Length=2490
Score = 3770 bits (2041), Expect = 0.0
Identities = 2339/2481 (94%), Gaps = 28/2481 (1%)
Strand=Plus/Plus
Query 200 ATGGCTTCAAGACAAGGATTGTCCTCAACATCCGCGACTCTAAACAAACTGTTGTTGGTG 259
||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||
Sbjct 1 ATGGCTTCAAGACAAGGATTGTCCTCAACGTCCGAGACTCCAAACAAACTGTTGTTGGTG 60
Query 260 CTGCCGCTTCAGCTTTATACTTGATAAAGAAGAGGGAAGTGGTGGCCATTATTGGACCAG 319
|| || | || | | | |||||||||||||||||||||||||||||||||
Sbjct 61 CT---GC--C-GC--T-T-C-------AGAAGAGGGAAGTGGTGGCCATTATTGGACCAG 103
Query 320 GGAATTCAATGCAAGCTCCATTTCTAATCAACCTCGGAAACCAAACTAAAGTTCCAATCA 379
||| ||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||
Sbjct 104 GGACTTCAATGCAAGCTCCATTTTTAATCAACCTTGGAAACCAATCTAAAGTTCCAATCA 163
Query 380 TTTCATTCTCTGCAACAAGTCCTCTTCTTGATTCTCTCCGTAGTCCGTATTTCATCAGAG 439
||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct 164 TTTCATTCTCTGCAACAAGCCCTCTTCTTGATTCCCTCCGTAGTCCATATTTCATCAGAG 223
Query 440 CCACACACGACGATTCGTCTCAAGTCCAAGCCATTAGCGCCATCATAGAGTCGTTTAGAT 499
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 224 CCACTCACGACGATTCGTCTCAAGTCCAAGCCATTAGCGCCATCATAGAGTCATTTAGAT 283
Query 500 GGAGAGAAGTTGTGCCTATTTATGTGGACAATGAGTTCGGAGAAGGTATTCTTCCTTACT 559
||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||
Sbjct 284 GGAGAGAAGTTGTGCCTATATATGTAGACAATGAGTTCGGAGAAGGTATTCTTCCTAACT 343
Query 560 TAGTTGATGCTTTTCAAGAGATCAACGTTCACATCCGATACCGAAGTGCCATATCAGTAC 619
|||||||||||||||||||||| || |||| |||||||||||||||||||| ||| |||
Sbjct 344 TAGTTGATGCTTTTCAAGAGATTAATGTTCGTATCCGATACCGAAGTGCCATCTCATTAC 403
Query 620 ATTCCTCTGATGATCAAATCAAGAAAGAGCTTTACAAACTTATGACCATGCCCACTAGGG 679
||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 404 ATTACTCTGATGATCAAATCAAGAAAGAGCTTTACAAACTAATGACCATGCCTACTAGGG 463
Query 680 TTTTTATCGTGCACATGCTTCCTGATCTCGGATCAAGGCTCTTTTCGATAGCAAAAGAGA 739
||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 464 TTTTTATCGTGCACATGCTGCCTGATCTCGGGTCAAGACTCTTTTCGATAGCAAAAGAGA 523
Query 740 TTGGTATGATGAGCAAAGGATATGTATGGATCGTCACAAATGGTATAGCTGATCTCATGA 799
||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 524 TTGATATGCTGAGCAAAGGATATGTATGGATAGTCACAAATGGTATAGCTGATCTCATGA 583
Query 800 GTGTAATGGGGGAACCAGGCTTGGAGAATATGCATGGTGTCTTGGGCGTCAAGACATATT 859
|| ||||||||||| || |||||| |||||||||||||||||||||||||||||||||||
Sbjct 584 GTATAATGGGGGAATCAAGCTTGGTGAATATGCATGGTGTCTTGGGCGTCAAGACATATT 643
Query 860 TTGCAAGAA-CAAAAGAGCTAATGTATCTTGAAGCTCGTTGGCGAAAAAGATTCGGAGGA 918
|||||| || | ||||||||| | |||||||||||||||||| ||||||||||||||||
Sbjct 644 TTGCAA-AATCCAAAGAGCTACTACATCTTGAAGCTCGTTGGCAAAAAAGATTCGGAGGA 702
Query 919 GAAGAGCTAAACAACTTTGCATGTTGGGCTTATGATGCTGCAACAGCACTTGCAATGTCA 978
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 703 GAAGAGCTGAACAACTTTGCATGTTGGGCTTATGATGCTGCCACAGCACTTGCAATGTCA 762
Query 979 GTTGAGGAAATTAGGCACGTAAACATGAGTTTCAACACGACCCAAGAAAACACTTCAAGA 1038
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 763 GTTGAGGAAATTAGGCACGTAAACATGAGTTTCAACACGACCAAAGAAGACACTTCAAGA 822
Query 1039 GATGATATTGGAACTGATCTTGATGATCTCGGATTTGCTCTCTCTGGTCCCAAACTTCTT 1098
||||||||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||||
Sbjct 823 GATGATATTGGGACTGATCTTGATGAACTCGGCGTTGCTCTATCTGGTCCCAAGCTTCTT 882
Query 1099 CAAGCGTTATCAACAGTCAGTTTCAAAGGCGTTTCCGGGAGATTTCAGCTGAAAAACGGA 1158
| || || |||||||||||||||||||| ||| |||||||||||||||| |||||||||
Sbjct 883 GATGCCTTGTCAACAGTCAGTTTCAAAGGTGTTGCCGGGAGATTTCAGCTAAAAAACGGA 942
Query 1159 AATCTAGAGGCGACGACTTTCAAGATTATCAATATAGAGGAAAGCGGTGAAAGAACGGTT 1218
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 943 AAGCTAGAGGCGACGACTTTCAAGATTATCAATATAGAGGAAAGCGGTGAAAGAACGGTT 1002
Query 1219 GGATTTTGGAAATCAAAAGTGGGATTAGTAGAGAGCCTAAGAGT-GCATCAAGTGTCACA 1277
|||||||||||||||||||| ||||||||| ||||| ||||||| | || ||||||| ||
Sbjct 1003 GGATTTTGGAAATCAAAAGTAGGATTAGTAAAGAGCTTAAGAGTAG-ATAAAGTGTCTCA 1061
Query 1278 CAGATCGCGTCGCCTTAGACCAATTATATGGCCAGGGGACACTATTTTTGTGCCTAAAGG 1337
||| || |||||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct 1062 CAGCTCCCGTCGCCTTAGACCGATAATATGGCCTGGTGACACTATTTTTGTGCCTAAAGG 1121
Query 1338 TTGGGAATTCCCAACAAACGCAAAGAAGCTGCGAATAGCGGTTCCAAAGAAGGATGGTTT 1397
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1122 TTGGGAATTCCCAACAAACGCAAAGAAGCTGCGAATAGCAGTTCCAAAGAAGGATGGTTT 1181
Query 1398 CAACAATTTTGTTGAGGTAACCAAGGATGAAAATGCTAATGTTCCAAGGGTCACTGGGTT 1457
|||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||
Sbjct 1182 CAACAATTTTGTTGAGGTAACCAAGGATGAAAATACTAATGTTCCAACGGTCACCGGGTT 1241
Query 1458 TTGCATAGATGTTTTCAACACGGTAATGAGCCAAATGCCATATGCTGTCTCCTATGAGTA 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 TTGCATAGATGTTTTCAACACGGTAATGAGCCAAATGCCATATGCTGTCTCCTATGAGTA 1301
Query 1518 CGTCCCCTTTGAGACTCCTGATGGAAAACCTAGTGGAAGTTACGATGAAATGGTTTATAA 1577
| |||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1302 CATCCCCTTTGATACGCCTGATGGAAAACCTCGTGGAAGTTACGATGAAATGGTTTATAA 1361
Query 1578 TGTGTTTCTTGGGGAGTTTGATGGAGCTGTAGGTGATACAACAATCTTGGCAAATCGGTC 1637
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1362 TGTGTTTCTTGGGGAGTTTGATGGAGCTGTAGGTGATACAACAATTTTGGCTAATCGGTC 1421
Query 1638 GCATTATGTCGATTTCGCGTTGCCATACTCAGAGACCGGAATTGTATTCGTTGTACCTGT 1697
||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||
Sbjct 1422 GCATTATGTTGATTTCGCGTTGCCATACTCGGAGACCGGAATTGTATTCCTTGTACCAGT 1481
Query 1698 CAAGGATGGGAAAGAAAAAGGAGAATGGGTCTTCTTAAAGCCTTTGACAAAGGAGCTATG 1757
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1482 CAAGGATGGGAAAGAAAAAGGAGAATGGGTCTTCTTAAAGCCTTTAACAAAGGAGCTATG 1541
Query 1758 GTTGATTACTGCTGCTTCTTTTCTCTACATTGGAATTATGGTTTGGATTTTTGAGTACCA 1817
|||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1542 GTTGGTCACTGCTGCTTCTTTTCTCTACATTGGAATCATGGTTTGGATTTTTGAGTACCA 1601
Query 1818 AGCAGATGAGGAGTTCAGGGAACAGATGATAATTGATAAAATATCTAGTGTGTTCTACTT 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1602 AGCAGATGAGGAGTTCAGGGAACAGATGATAATTGATAAAATATCTAGTGTGTTCTACTT 1661
Query 1878 CTCGTTTTCGACTCTCTTTTTCGCACACAGGAGGCCATCAGAGAGCTTTTTCACAAGGGT 1937
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1662 CTCGTTTTCGACTCTCTTTTTCGCACACAGGAGGCCATCAGAGAGCTTTTTTACAAGGGT 1721
Query 1938 TCTTGTTGTGGTTTGGTGCTTTGTGTTGTTAATTCTGACTCAGAGCTACACAGCAACATT 1997
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1722 TCTTGTTGTGGTTTGGTGCTTTGTGTTGCTAATTCTGACTCAGAGCTACACAGCAACACT 1781
Query 1998 GACATCTATGCTGACGGTTCAAGAGCTTCGACCAACAGTGAGACACATGGATGATCTGAG 2057
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1782 GACATCGATGCTGACAGTTCAAGAGCTTCGACCAACAGTGAGACACATGGATGATTTGAG 1841
Query 2058 GAAGAGCGGAGTGAACATTGGATATCAAACTGGTTCGTTTACATTTGAAAGGCTGAAACA 2117
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1842 GAAGAGCGGAGTGAACATTGGATATCAAACTGGTTCGTTTACATTCGAAAGGCTGAAACA 1901
Query 2118 AATGCGTTTCGATGAATCGAGGTTAAAGACATATAATTCTCCTGAAGAAATGCGTGAACT 2177
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1902 AATGCGTTTCGATGAATCGAGGTTAAAGACATATAATTCTCCTGAAGAGATGCGTGAACT 1961
Query 2178 TTTTCTTAAAAAGAGCAGCAATGGCGGGATTGATGCTGCATTCGATGAAGTCGCTTATAT 2237
||||||| | ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1962 TTTTCTTCACAAGAGCAGCAATGGCGGGATTGATGCTGCGTTCGATGAGGTCGCTTATAT 2021
Query 2238 CAAACTTTTCATGGCTAAGTATTGCTCACAGTATTCCATAATCGAGCCTACCTTTAAGGC 2297
||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 2022 CAAGCTTTTCATGGCTAAGTATTGCTCAGAGTATTCCATCATCGAGCCTACCTTTAAGGC 2081
Query 2298 TGATGGCTTTGGCTTTGTAAGCATT-CCACTAGGATCTCCATTGGTATCAGATATTTCAA 2356
||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||
Sbjct 2082 TGATGGCTTTGGCTTTG----CATTTCCACTAGGATCTCCATTGGTGTCAGATATTTCAA 2137
Query 2357 GACAGATCTTGAACATAACAGAGGGAGATACCATGAAGGCTATAGAGAACAAGTGGTTCC 2416
||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 2138 GACAGATCTTGAACATAACAGAGGGAGATGCCATGAAAGCTATAGAGAACAAGTGGTTCC 2197
Query 2417 TTGGAGAAAAACATTGTCTGGACTCGACTACATCAGATTCTCCAATCCAGCTCGATCATC 2476
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2198 TTGGAGAAAAACATTGTCTGGACTCGACTACATCAGATTCTCCAATCCAGCTCGACCACC 2257
Query 2477 ACAGCTTTGAAGCTCTATTTCTGATCGTCTTTGTTGTTTCTATCATTCTACTCTTACTCA 2536
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 2258 ACAGCTTTGAAGCTCTATTTCTGATCGTCTTTGTTGTTTCTGTGATTCTACTCTTACTCA 2317
Query 2537 TGTTGGCTTCAAGAAGATACCAAGAGAGACAACGCAATGCTTCACTCAATCTACCAAATG 2596
|||||||||| ||| |||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2318 TGTTGGCTTCTAGAGGATACCAAGAGAGACAACACAATGCTTCACCCAATCTACCAAATG 2377
Query 2597 ATCAAGCCACTGCAGCTCAAGAAGAAAG-CAATGAAGAAGGTAATTTTGGAGATCATATT 2655
||||||||| |||||||||||||||| | |||||||||||||||| ||||||||||||||
Sbjct 2378 ATCAAGCCAATGCAGCTCAAGAAGAA-GTCAATGAAGAAGGTAATGTTGGAGATCATATT 2436
Query 2656 GTGGAAGTCGACACAGCTTTG 2676
|||||||||||||||||||||
Sbjct 2437 GTGGAAGTCGACACAGCTTTG 2457
> AT5G11180.1 | Symbols: ATGLR2.6, GLR2.6 | glutamate receptor
2.6 | chr5:3557261-3561575 REVERSE LENGTH=2721
Length=2721
Score = 2222 bits (1203), Expect = 0.0
Identities = 1625/1826 (89%), Gaps = 40/1826 (2%)
Strand=Plus/Plus
Query 1 ATGTCTTTTTTCCATCATC-TCGTGTCTCGTTTTCTTCCATTATGGCTTTTAATTTTCCT 59
|||||||| ||| |||||| || | |||||| |||||| |||||||||||| |||| |
Sbjct 1 ATGTCTTTATTCAATCATCTTC-TATCTCGTGCTCTTCCTTTATGGCTTTTATTTTTTAT 59
Query 60 CATCTTC-T--TATCACTCGGGAATTCTCAAAAGGAAGCTTTACAAGTAAAAGTGGGGAT 116
|| |||| | ||| ||||||||| |||||| |||||| ||||||||| ||||||| ||
Sbjct 60 CAACTTCTTAGTATTACTCGGGAAATCTCAACAGGAAGTTTTACAAGTTCAAGTGGGAAT 119
Query 117 TGTTCTTGGCAGTAATGTGACATTCGCAGATTTAAGCTTGCGAGCTTTCGAA-ATGTCTC 175
|||||||| || ||||| |||||| |||| ||| ||||| |||||| || || |||||||
Sbjct 120 TGTTCTTGACACTAATGCGACATTAGCAGCTTTGAGCTTACGAGCTATC-AACATGTCTC 178
Query 176 TGTCGGAATTCTATAATACTCATAATGGCTTCAAGACAAGGATTGTCCTCAACATCCGCG 235
| || ||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct 179 TCTCTGAATTCTATAACACTCATAATGGCTTCAAGACGAGGATTGTCCTCAACATCCGAG 238
Query 236 ACTCTAAACAAACTGTTGTTGGTGCTGCCGCTTCAGCTTTATACTTGATAAAGAAGAGGG 295
| || |||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 239 ATTCCAAACGAACTGTTGTTGGTGCTGCAGCTTCAGCTTTATACTTGATAAAGAAGAGGG 298
Query 296 AAGTGGTGGCCATTATTGGACCAGGGAATTCAATGCAAGCTCCATTTCTAATCAACCTCG 355
|||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 299 AAGTGGTGGCCATTATAGGACCAGGGAATTCAATGCAAGCACCATTTTTAATCAACCTCG 358
Query 356 GAAACCAAACTAAAGTTCCAATCATTTCATTCTCTGCAACAAGTCCTCTTCTTGATTCTC 415
|||| ||| || ||||||| || |||||||||||||| |||| ||| ||||||||||||
Sbjct 359 GAAATCAATCTCAAGTTCCCATAATTTCATTCTCTGCGTCAAGCCCTGTTCTTGATTCTC 418
Query 416 TCCGTAGTCCGTATTTCATCAGAGCCACACACGACGATTCGTCTCAAGTCCAAGCCATTA 475
|||||||||| |||||||||||||| |||||||| || || |||||||| || |||||||
Sbjct 419 TCCGTAGTCCATATTTCATCAGAGCTACACACGATGACTCATCTCAAGTGCACGCCATTA 478
Query 476 GCGCCATCATAGAGTCGTTTAGATGGAGAGAAGTTGTGCCTATTTATGTGGACAATGAGT 535
|||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 479 GCGCCATCATAGAGTCATTTAGATGGAGGGAAGTTGTGCCTATTTATGCAGACAATGAGT 538
Query 536 TCGGAGAAGGTATTCTTCCTTACTTAGTTGATGCTTTTCAAGAGATCAACGTTCACATCC 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 539 TCGGAGAAGGTATTCTTCCTTACTTAGTTGATGCTTTTCAAGAGATCAACGTTCGTATCC 598
Query 596 GATACCGAAGTGCCATATCAGTACATTCCTCTGATGATCAAATCAAGAAAGAGCTTTACA 655
|||||||||||||||||||||| |||||| ||||||| | | ||||||||||||||||||
Sbjct 599 GATACCGAAGTGCCATATCAGTCCATTCCACTGATGACCTAGTCAAGAAAGAGCTTTACA 658
Query 656 AACTTATGACCATGCCCACTAGGGTTTTTATCGTGCACATGCTT-CCTGATCTCGGATCA 714
|||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 659 AACTAATGACCATGCCCACTAGGGTTTTTATCGTGCACATG-TTGCCTGATCTCGGATCG 717
Query 715 AGGCTCTTT-TCGATAGCAAAAGAGATTGGTATGATGAGC-AAAGGATATGTATGGATCG 772
||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||| |
Sbjct 718 AGGCT-TTTCTCGATAGCAAAAGAGATTGGTATGATGA-CTAAAGGATATGTATGGATTG 775
Query 773 TCACAAATGGTATAGCTGATCTCATGAGTGTAATGGGGGAACCAGGCTTGGAGAATATGC 832
||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||
Sbjct 776 TCACAAATGGTATAGCTGATCAAATGAGTGTAATGGGGGAATCAAGCTTGGAGAATATGC 835
Query 833 ATGGTGTCTTGGGCGTCAAGACATATTT-TGCAAGAACAAAAGAGCTAATGTATCTTGAA 891
|||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||
Sbjct 836 ATGGTGTCTTGGGCGTCAAGACATATTTCT-CAAGATCAAAAGAGCTAATGTATCTTGAA 894
Query 892 GCTCGTTGGCGAAAAAGATTCGGAGGAGAAGAGCTAAACAACTTTGCATGTTGGGCTTAT 951
|||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||
Sbjct 895 ACTCGTTGGCGAAAAAGATTCGGAGGAGAAGAGCTAAACAATTTTGAATGTTGGGGTTAT 954
Query 952 GATGCTGCAACAGCACTTGCAATGTCAGTTGAGGAAATTAG--GCA-CGTAAACATGAGT 1008
||| | || |||||||||||||||||| |||||||||| || | | |||||||||||||
Sbjct 955 GATACGGCCACAGCACTTGCAATGTCAATTGAGGAAATCAGTAGTAACGTAAACATGAGT 1014
Query 1009 TTCAA-CACGACCCAA-GAAAACACTTCAAGAGATGATATTGGAACTGATCTTGATGATC 1066
|||| || |||| || |||| ||||||||||||||||| ||| || |||||||||||||
Sbjct 1015 TTCAGTCA-GACCAAAAGAAA-CACTTCAAGAGATGATACTGGGACAGATCTTGATGATC 1072
Query 1067 TCGGATTTGCTCTCTCTGGTCCCAAACTTCTTCAAGCGTTATCAACAGTCAGTTTCAAAG 1126
|| | |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1073 TCAGCTTTGCTCTCTCTGGTCCCAAGCTTCTTCAAGCGTTGGCAACAGTCAGTTTCAAAG 1132
Query 1127 GCGTTTCCGGGAGATTTCAGCTGAAAAACGGAAATCTAGAGGCGACGACTTTCAAGATTA 1186
||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct 1133 GCGTTGCCGGAAGATTTCAGCTAAAAAACGGAAAGCTAGAGGCGACGACTTTCAAGAT-A 1191
Query 1187 -TCAATATAGAGGAAAGCGGTGAAAGAACGGTTGGATTTTGGAAATCAAAAGTGGGATTA 1245
|||||||||||||||| || |||||||| ||||||||||||||||||||||| ||| ||
Sbjct 1192 GTCAATATAGAGGAAAGTGGGGAAAGAACAGTTGGATTTTGGAAATCAAAAGTAGGACTA 1251
Query 1246 GTAGA-GAGCCTAAGAGTGCATCAA---G---TG----T--CACACAGATCGCGTCGCCT 1292
|| || |||| |||||||| ||||| | | | ||||||| |||| |||||
Sbjct 1252 GT-GAAGAGCTTAAGAGTGAATCAAACAGGCATTAAAATATCACACAGCTCGCACCGCCT 1310
Query 1293 TAGACCAATTATATGGCCAGGGGACACTATTTTTGTGCCTAAAGGTTGGGAATTCCCAAC 1352
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1311 TAGACCGATAATATGGCCAGGGGACACTATTTTTGTGCCTAAAGGTTGGGAATTCCCAAC 1370
Query 1353 AAACGCAAAGAAGCTGCGAATAGCGGTTCCAAAGAAGGATGGTTTCAACAATTTTGTTGA 1412
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 1371 AAACGCAAAGAAGCTGCGAATAGCAGTTCCAAAGAAGGATGGTTTCAATAATTTTGTGGA 1430
Query 1413 GGTAACCAAGGATGAAAATGCTAATGTTCCAAGGGTCACTGGGTTTTGCATAGATGTTTT 1472
|||||| || |||| |||| |||||| ||||| | |||| ||||||||||||||||||||
Sbjct 1431 GGTAACAAAAGATGCAAATACTAATGCTCCAACGATCACCGGGTTTTGCATAGATGTTTT 1490
Query 1473 CAACACGGTAATGAGCCAAATGCCATATGCTGTCTCCTATGAGTACGTCCCCTTTGAGAC 1532
| |||||| |||||| |||||||| ||||||||| ||||||||||| | |||||||| ||
Sbjct 1491 CGACACGGCAATGAGACAAATGCCTTATGCTGTCCCCTATGAGTACATACCCTTTGAAAC 1550
Query 1533 TCCTGATGGAAAACCTAGTGGAAGTTACGATGAAATGGTTTATAATGTGTTTCTTGGGGA 1592
||||||||||||||| |||||||||| || |||||||||||| |||| |||||||||||
Sbjct 1551 TCCTGATGGAAAACCCCGTGGAAGTTATGACGAAATGGTTTATCATGTATTTCTTGGGGA 1610
Query 1593 GTTTGATGGAGCTGTAGGTGATACAACAATCTTGGCAAATCGGTCG-CATTATGTCGATT 1651
|||||||||||| ||||| ||||| |||||||| || |||||||| ||| | || ||||
Sbjct 1611 GTTTGATGGAGCAGTAGGGGATACCACAATCTTAGCTAATCGGTCTACAT-ACGTAGATT 1669
Query 1652 TCGCGTTGCCATACTCAGAGACCGGAATTGTATTCGTTGTACCTGTCAAGGATGGGAAAG 1711
|||||||||||||||| ||||| || |||||| |||| ||||| |||||||||| || |
Sbjct 1670 TCGCGTTGCCATACTCGGAGACGGGTATTGTAGTCGTGGTACCCGTCAAGGATGAGAGGG 1729
Query 1712 AAAAAGGAGAATGGGTCTTCTTAAAGCCTTTGACAAAGGAGCTATGGTTGATTACTGCTG 1771
|||||||| |||||||||||||||||||||| |||| |||||| ||||| | ||||| |
Sbjct 1730 AAAAAGGAAAATGGGTCTTCTTAAAGCCTTTAACAAGGGAGCTCTGGTTCCTCACTGCAG 1789
Query 1772 CTTCTTTTCTCTACATTGGAATTATG 1797
||||||||||||||||||| || |||
Sbjct 1790 CTTCTTTTCTCTACATTGGGATCATG 1815
Score = 728 bits (394), Expect = 0.0
Identities = 523/585 (89%), Gaps = 10/585 (2%)
Strand=Plus/Plus
Query 1977 TCA-GAGCTACACAGCAACATTGACATCTATGCTGACGGTTCAAGAGCTTCGACCAACAG 2035
||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1811 TCATGAGCTACACAGCAACATTGACATCGATGCTGACGGTTCAAGAACTTCGACCAACAG 1870
Query 2036 TGAGACACATGGATGATCTGAGGAAGAGCGGAGTGAACATTGGATATCAAACTGGTTCGT 2095
||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| |
Sbjct 1871 TGAGACACATGGATGATCTGAGGAACAGTGGAGTTAACATTGGATATCAAACTGGTTCCT 1930
Query 2096 TTACATTTGAAAGGCTGAAACAAATGCGTTTCGATGAATCGAGGTTAAAGACATATAATT 2155
||||||| |||||||||||||||||| ||| | | ||||||||||||||||| ||| ||
Sbjct 1931 TTACATTCGAAAGGCTGAAACAAATGGGTTACAAAGAATCGAGGTTAAAGACTTATGATA 1990
Query 2156 CTCCTGAAGAAATGCGTGAACTTTTTCTTAAAAAGAGCAGCAATGGCGGGATTGATGCTG 2215
||||| | ||||||| ||| |||||||||||||||||||||||||| || ||||||||||
Sbjct 1991 CTCCTCAGGAAATGCATGAGCTTTTTCTTAAAAAGAGCAGCAATGGTGGTATTGATGCTG 2050
Query 2216 CATTCGATGAAGTCGCTTATATCAAACTTTTCATGGCTAAGTATTGCTCACAGTATTCCA 2275
||||||| |||||||||||| |||| |||||||||||||| ||||||||| | ||| |||
Sbjct 2051 CATTCGACGAAGTCGCTTATGTCAAGCTTTTCATGGCTAAATATTGCTCAAAATATACCA 2110
Query 2276 TAATCGAGCCTACCTTTAAGGCTGATGGCTTTGGCTTTGTAAGCATTCCACTAGGATCTC 2335
| ||||||||||||||||||||||||||||||||||||| | ||||| | |||||||
Sbjct 2111 TTATCGAGCCTACCTTTAAGGCTGATGGCTTTGGCTTTGC---CTTTCCATTGGGATCTC 2167
Query 2336 CATTGGTATCAGATATTTCAAGACAGATCTTGAACATAACAGAGGGAGATACCATGAAGG 2395
| ||||| ||||| ||||||||||||||||||| ||||| |||||||| |||||||| |
Sbjct 2168 CTTTGGTGCCAGATCTTTCAAGACAGATCTTGAATATAACGGAGGGAGAGACCATGAAAG 2227
Query 2396 CTATAGAGAACAAGTGGTTCCTTGGAGAAAAACATTGTCTGGACTCGACTACATCAGATT 2455
|||||||||| |||||| |||| ||||||||||||||||| ||||| || ||||| ||||
Sbjct 2228 CTATAGAGAATAAGTGGCTCCTCGGAGAAAAACATTGTCTTGACTCAACCACATCGGATT 2287
Query 2456 CTCCAATCCAGCTCGATCATCACAGCTTTGAAGCTCTATTT-CTGATCGTCTTTGTTGTT 2514
||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||||||||
Sbjct 2288 CTCCAATCCGGCTCGATCACCACAGCTTTGAAGCTCTATTTAC-GATCGTCTTTGTTGTT 2346
Query 2515 TCTAT-CATTCTACTCTTA-CTCATGTTGGCTTCAAGAAGATACC 2557
||||| | ||||||||||| | |||||||| || ||||||||||
Sbjct 2347 TCTATGC-TTCTACTCTTAGC-CATGTTGGTTTGTAGAAGATACC 2389
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136805253561
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5