BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325665 Length=609 Score E Sequences producing significant alignments: (Bits) Value AT5G11360.1 | Symbols: | Interleukin-1 receptor-associated kin... 760 0.0 > AT5G11360.1 | Symbols: | Interleukin-1 receptor-associated kinase 4 protein | chr5:3625570-3626700 REVERSE LENGTH=953 Length=953 Score = 760 bits (411), Expect = 0.0 Identities = 542/602 (90%), Gaps = 22/602 (4%) Strand=Plus/Plus Query 1 ATGGGAAACATTGTAAAGCCTTTCAAACAACAACCTTCTTCATTTGCTTACCAGCCTCTC 60 |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 97 ATGGGAAACATTGTCAAGCCTTTCAAGCAACAACCTTCTTCTTTTGCTTACCAGCCTCTC 156 Query 61 ACCGTCCCTCTAATTTCAGAAGTGGAGGCACAAAACGAGAATCTGAGAGTCTTCAGCTTC 120 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 157 ACCGTCCCTCTAATTCCAGAAGTGGAGGCACAAAGCGAGAATCTGAGAGTCTTCAGTTTC 216 Query 121 AAGGAATGGATGAAAGCAACGAAGAAATACAGACAAGACAGGGTCG-AACTTTGCGACAA 179 |||||||||||||||||||||||||||| ||||||||||||||||| || || |||| | Sbjct 217 AAGGAATGGATGAAAGCAACGAAGAAATCCAGACAAGACAGGGTCGTAA-TTCGCGATGA 275 Query 180 TCCCTATATTCGATTTCGAACATTCTACAAGGGCTACATCGATAACACCACATTTGCACC 239 || |||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 276 TCACTATATTCGA--T----CATTCTACAAGGGCTACATCGATAACACCACATTTGCACC 329 Query 240 ATCAAGAACTAAAACCGGTACCCCTGTTTCTGTTGTCGAATATCTTCATAAAAGTTCACA 299 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 330 ATCAAGAACTAAAACCGGTACCCCTGTTTCTGTTGTCGAATATCTTCATGGCAGTTCACA 389 Query 300 GGCTCTACAAGAGTGGGTGGCCGATGTTTACATATTTGGCGTGATCTTGCTTGAGATTTT 359 |||||||||||||||||||| | ||||||||||||||||||||||||| |||| Sbjct 390 GGCTCTACAAGAGTGGGTGG---A------CATATTTGGCGTGATCTTGCTTGAGCTTTT 440 Query 360 AGCTGGTTCGA-AAGCTAGATCAAGAAATATGAAGAATCAAAGCTCCGATGATTGGACTG 418 || |||||| | ||| |||||||| | | |||||||||||||||| | |||||||||| Sbjct 441 AGTTGGTTC-ACAAGATAGATCAACAGCTTTGAAGAATCAAAGCTC--A-GATTGGACTG 496 Query 419 GATCTTTCTTGCCCGATAATTATAAAATTGAGGAAATAATCGATCCCCGACTAGGAAGTG 478 | ||||||||||||||||||||||| |||| |||||||||||| |||||| ||||||| | Sbjct 497 GGTCTTTCTTGCCCGATAATTATAAGATTGGGGAAATAATCGACCCCCGAATAGGAAGCG 556 Query 479 ATTATCCTGTGGATGCGGCAACAATGATGGTCACACTCATCCAAAGTTGCACCAAGCGGG 538 ||||||||||||||||||| |||| ||| ||||||||||||||||| |||||||| |||| Sbjct 557 ATTATCCTGTGGATGCGGCCACAAAGATTGTCACACTCATCCAAAGATGCACCAATCGGG 616 Query 539 ACAAGAAGAATCGACCACTGATGCAACAAGTTTTGGATGTTCTGAATAATATTGCAGAGA 598 |||||||||| |||||| |||||||| |||||||||||| ||||||| ||||||||| || Sbjct 617 ACAAGAAGAAACGACCATTGATGCAAGAAGTTTTGGATGCTCTGAATTATATTGCAGGGA 676 Query 599 TT 600 || Sbjct 677 TT 678 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29336741848 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5