BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg325917 Length=1101 Score E Sequences producing significant alignments: (Bits) Value AT5G14470.1 | Symbols: | GHMP kinase family protein | chr5:466... 1746 0.0 AT3G01640.1 | Symbols: ATGLCAK, GLCAK | glucuronokinase G | chr... 922 0.0 > AT5G14470.1 | Symbols: | GHMP kinase family protein | chr5:4662803-4664657 REVERSE LENGTH=1327 Length=1327 Score = 1746 bits (945), Expect = 0.0 Identities = 1050/1102 (95%), Gaps = 2/1102 (0%) Strand=Plus/Plus Query 1 ATGGATCCGAATCCGAAACCGGCGATTTCAGGCAATGATAA-GGCCGTGTTCGAGCATCG 59 |||||||||||||| |||||||||||||| ||||| ||||| || ||||||||||||||| Sbjct 1 ATGGATCCGAATCCTAAACCGGCGATTTCTGGCAAAGATAATGG-CGTGTTCGAGCATCG 59 Query 60 TTCGTTCGCTAGAATCGGGTTTCTGGGAAACCCTAGCGACGTTTACTTCGGTCGTACGAT 119 ||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 60 CTCGTTTGCTAGAATCGGGTTTCTTGGAAACCCTAGCGATGTTTACTTCGGTCGTACGAT 119 Query 120 TTCATTTACCATTGGTAATTTCTGGGCTTGGGCTAAGCTCGAACCATCCGATCATCTTTT 179 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || Sbjct 120 TTCATTTACCATTGGTAATTTCTGGGCGTGGGCTAAGCTCGAACCATCTGATCATCTCTT 179 Query 180 GATCAAACCTCATCCATTCCATGATCTTGTCCAGTTCGATTCTCTCGACAATCTCGTTTA 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 180 GATCAAACCTCATCCATTCCATGATCTTGTCCAGTTCGATTCTCTCGATAATCTCGTTTA 239 Query 240 TCGATTGGAAAATGATGGATACTACGGAGGTGTAAGGTTGCTAATGGCGATTTGCAAAGT 299 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 240 TCGATTGGAAAATGATGGATACTATGGAGGTGTAAGGTTACTAATGGCGATTTGCAAAGT 299 Query 300 ATTCCGCAACTATTGCAAAGATAATGGCATACAACTTCATGaaaaaaaCTTCTCTCTTTC 359 |||||| |||||||||||||| ||||| |||||||||||||| ||||||||| ||||||| Sbjct 300 ATTCCGAAACTATTGCAAAGAAAATGGTATACAACTTCATGACAAAAACTTCACTCTTTC 359 Query 360 TTATGATACCAATATCCCTAGGCAGACAGGGCTTTCGGGTTCTAGTGCCATTGTATCTGC 419 |||||||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| Sbjct 360 TTATGATACCAATATCCCAAGACAGACGGGGCTTTCAGGTTCTAGTGCAATTGTATCTGC 419 Query 420 TGCTCTTAGCTGCCTTCTCGACTTCTACAATGTCAGGCAATCAATCAGAATCGAAGTCCG 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 TGCTCTTAGCTGCCTTCTCGACTTCTACAATGTCAGGCAATCAATCAGAATCGAAGTCCG 479 Query 480 ACCTAACCTTATTCTCAATGCGGAGAAAGAACTTGGTATTGTTGCTGGTCTTCAAGACCG 539 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 ACCTAACCTTATTCTTAATGCGGAGAAAGAACTTGGTATTGTTGCTGGTCTTCAAGACCG 539 Query 540 TGTTGCTCAAGTCTATGGTGGTGGTCTTGTTCACATGGATTTTAGTAAAGAACATATGGA 599 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 540 TGTTGCTCAAGTCTATGGTGGTGGTCTTGTTCACATGGATTTTAGTAAAGAGCATATGGA 599 Query 600 TAAAGTTGGATATGGGATATACACTATAATGGATATCAATCTTCTTCCTCCTCTGCATCT 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 TAAAGTTGGATATGGGATATACACTATAATGGATATCAATCTTCTTCCTCCTCTGCATCT 659 Query 660 AATCTATGCTGAGAATCCAAGTGACTCTGGCAAGGTACATAGCACGGTTCGTAGAAGGTG 719 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 660 CATCTATGCTGAGAATCCTAGTGACTCTGGCAAGGTACATAGCACGGTTCGTAGAAGGTG 719 Query 720 GTTAGATGGTGATGAGTTCATAATATCATCAATGGCAGAAATTGCAAAATTAGCTGAAGA 779 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 720 GTTAGACGGTGATGAGTTTATAATATCATCAATGGCAGAAATTGCAAAATTAGCTGAAGA 779 Query 780 AGGTCGAACTGCATTACTTAAAAAAGATTACTCCAAACTCAAGGAACTCATGAACCGTAA 839 ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 780 AGGTCGAACTGCATTGCTTAAGAAAGATTACTCCAACCTCAAGGAACTCATGAACCGTAA 839 Query 840 CTTCGATCTTCGAAGGAGTATGTTTGGAGATGAATGTTTGGGAGCTATGAACATAGAAAT 899 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 840 CTTCGATCTTCGAAGGAGTATGTTTGGAGATGAATGTTTGGGAGCTATGAACATAGAGAT 899 Query 900 GGTGGAAGTGGCTCGTAAGATCGGAGCAGCTGCAAAGTTCACTGGAAGCGGAGGGGCTGT 959 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 900 GGTGGAAGTGGCACGTAAGATCGGCGCAGCTGCAAAGTTCACTGGAAGCGGAGGAGCTGT 959 Query 960 GGTTGTTTTCTGCCCCGATGGACCATCTCAGGTCAAACTCCTCGAAGAAGAATGTCGAAA 1019 ||| ||||||||||| || || ||||||||||||||||| || |||||||||||||| || Sbjct 960 GGTGGTTTTCTGCCCTGAGGGGCCATCTCAGGTCAAACTTCTAGAAGAAGAATGTCGGAA 1019 Query 1020 ATCTGGATTTATAGTTGAGCCAGTAAAGCTTGTGCCTACACGCCTCAATAATTCTGATCT 1079 |||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||| | Sbjct 1020 ATCTGGATTTATCGTTGAGCCAGTAAAGCTTGTGCCTACCCGCCTCAGTAGTTCTGATAT 1079 Query 1080 TAAGACTTTATCAAAACCATGA 1101 |||||| ||||||||| ||||| Sbjct 1080 TAAGACATTATCAAAAACATGA 1101 > AT3G01640.1 | Symbols: ATGLCAK, GLCAK | glucuronokinase G | chr3:239381-241443 FORWARD LENGTH=1371 Length=1371 Score = 922 bits (499), Expect = 0.0 Identities = 880/1063 (83%), Gaps = 29/1063 (3%) Strand=Plus/Plus Query 52 GAGCATCGTTCGTTCGCTAGAATCGGGTTTCTGGGAAACCCTAGCGACGTTTACTTCGGT 111 |||||||| || |||||| | ||||| ||||| |||||||| ||||| || |||||||| Sbjct 89 GAGCATCGGTCCTTCGCTCGGATCGGATTTCTCGGAAACCCGAGCGATGTATACTTCGGG 148 Query 112 CGTACGATTTCATTTACCATTGGTAATTTCTGGGCTTGGGCT-AAGCTCGAACCATCCGA 170 || || || ||||| ||||| || || |||||||| | | | ||||| || ||||| || Sbjct 149 CGAACCATATCATTGACCATCGGAAACTTCTGGGCATCCG-TGAAGCTGGAGCCATCGGA 207 Query 171 TCATCTTTTGATCAAACCTCATCCATTCCATGATCTTGTCCAGTTCGA-TTCTCTCGACA 229 ||||| | ||||| |||||||||||||||||||| ||||||||| | ||||||||| Sbjct 208 GCATCTCGTAATCAAGCCTCATCCATTCCATGATCTCGTCCAGTTC-ACCTCTCTCGACC 266 Query 230 ATCTCGTTTATCGATTGGAAAATGATGGATACTACGGAGGTGTAAGGTTGCTAATGGCGA 289 ||||| | |||| ||| ||||||| ||||||||||| || ||||||||||||||||||| Sbjct 267 ATCTCCTGAATCGTTTGCAAAATGAAGGATACTACGGTGGGGTAAGGTTGCTAATGGCGA 326 Query 290 TTTGCAAAGTATTCCGCAACTATTGCAAAGATAATGGCATACAACTTCATGaaaaaaaCT 349 | || ||||||||||| |||||||||||||| |||| ||| |||||||| || |||| Sbjct 327 TATGTAAAGTATTCCGTAACTATTGCAAAGAGAATGACATTCAACTTCACCAAGCCAACT 386 Query 350 TCTCTCTTTCTTATGATACCAATATCCCTAGGCAGACAGGGCTTTCGGGTTCTAGTGCCA 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 387 TCTCTCTTTCTTATGATACCAATATCCCTAGGCAGACAGGGCTTTCGGGTTCTAGTGCCA 446 Query 410 TTGTATCTGCTGCTCTTAGCTGCCTTCTCGACTTCTACAATGTCAGGCAATCAATCAGAA 469 | ||||| ||||| |||| |||||||||||||||||||||||||||||| | |||| || Sbjct 447 TCGTATCCGCTGCCCTTAACTGCCTTCTCGACTTCTACAATGTCAGGCATTTGATCA-AA 505 Query 470 -T-CGAAGTCCGACCTAACCTTATTCTCAATGCGGAGAAAGAACTTGGTATTGTTGCTGG 527 | | ||||||| |||||| || |||||| ||| |||||||||||||| ||||||||||| Sbjct 506 GTAC-AAGTCCGCCCTAACATTGTTCTCAGTGCTGAGAAAGAACTTGGCATTGTTGCTGG 564 Query 528 TCTTCAAGACCGTGTTGCTCAAGTCTATGGTGGTGGTCTTGTTCACATGGATTTTAGTAA 587 |||||| ||| | |||||||| |||||||||||| |||||||||||||||||||| || Sbjct 565 TCTTCAGGACAGGGTTGCTCAGGTCTATGGTGGT---CTTGTTCACATGGATTTTAGCAA 621 Query 588 AGAACATATGGATAAAGTTGGAT-ATGGGATATACACTA-TAATGGATATCAATCTTCTT 645 || || ||||||||| |||| ||||||| |||||| || ||||||||| ||| || Sbjct 622 GGAGCACATGGATAAA-TTGGGGCATGGGATTTACACTCCTA-TGGATATCAGTCTCCTC 679 Query 646 CCTCCTCTGCATCTAATCTATGCTGAGAATCCAAGTGACTCTGGCAAGGTACATAGCACG 705 |||||||||||||| ||||||||||||||||| || ||||| || ||||||||||| | | Sbjct 680 CCTCCTCTGCATCTCATCTATGCTGAGAATCCGAGCGACTCAGGGAAGGTACATAGTATG 739 Query 706 GTTCGT-AGAAGGTGGTTAGATGGTGATGAGTTCATAATATCATCAATGGCAGAAATTGC 764 ||||| | ||| |||||||| ||||||||||| ||||| ||||||||| |||| | | Sbjct 740 GTTCGGCA-AAGATGGTTAGACGGTGATGAGTTTATAATCTCATCAATGAAAGAAGTCGG 798 Query 765 AAAAT-TAGCTGAAGAAGGTCGAACTGCATTACTTAAAAAAGATTACTCCAAACTCAAGG 823 || | |||| ||||||||||||||||||||||| || || || | |||||||| || Sbjct 799 AAG-TCTAGCAGAAGAAGGTCGAACTGCATTACTCAACAAGGACCATTCCAAACTTGTGG 857 Query 824 AACTCATGAACCGTAACTTCGATC-TTCGAAGGAGTATGTTTGGAGATGAATGTTTGGGA 882 |||||||||||| ||| ||||| | |||| ||| | |||||||| |||||||| || ||| Sbjct 858 AACTCATGAACCTTAATTTCGA-CATTCGGAGGCGGATGTTTGGGGATGAATGCTTAGGA 916 Query 883 GCTATGAACATAGAAATGGTGGAAGTGGCTCGTAAGATCGGAGCAGC-TGCAAAGTTCAC 941 || ||||||||||| ||||||||||| || | | | | || ||||| | |||||||||| Sbjct 917 GCAATGAACATAGAGATGGTGGAAGTAGCAAGGAGGGTTGGTGCAGCCT-CAAAGTTCAC 975 Query 942 TGGAAGCGGAGGGGCTGTGGTTGTTTTCTGCCCCGATGGACCATCTCAGGTCAAACTCCT 1001 |||||| ||||| || ||||| ||||||||||| || || ||||||||||| ||||| || Sbjct 976 TGGAAGTGGAGGAGCAGTGGTGGTTTTCTGCCCTGAAGGTCCATCTCAGGTGAAACTTCT 1035 Query 1002 CGAAGAAGAATGTC-GAAAATCTGGATTTATAG-TTGAGCCAGTAAAGCTTGTGCCTACA 1059 ||||||||||| | | ||| | ||||||| | || |||| ||||| ||| |||| || Sbjct 1036 GGAAGAAGAATG-CAGGAAAGCGGGATTTAC-GCTTCAGCCGGTAAAAATTGCGCCTTCA 1093 Query 1060 CGCCTCAATAATTCTGATC-TTAAGACTTTATCAAAACCATGA 1101 | | ||| ||||||| | || |||| |||| ||| || ||| Sbjct 1094 TGTTTGAATGATTCTGA-CATTCAGACCTTATGAAAGCCTTGA 1135 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53965585875 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5