BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg326092 Length=462 Score E Sequences producing significant alignments: (Bits) Value AT5G16490.1 | Symbols: RIC4 | ROP-interactive CRIB motif-contai... 721 0.0 > AT5G16490.1 | Symbols: RIC4 | ROP-interactive CRIB motif-containing protein 4 | chr5:5384305-5385213 REVERSE LENGTH=633 Length=633 Score = 721 bits (390), Expect = 0.0 Identities = 438/462 (95%), Gaps = 0/462 (0%) Strand=Plus/Plus Query 1 ATGAGAGATAGAATGGAGAGACTTGTGGTGCTTCCTTTCTCCGTCGGATGTATCTCCGAC 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 9 ATGAGAGATAGAATGGAGAGACTTGTGGTGCTTCCTTTCTCCATCGGATGTATCTCCGTC 68 Query 61 TCAAGTGTTGCCGTTTTATCTCCTCTCTCAAAGCCTCATCATCATCACTCTCGTCAAGAG 120 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | Sbjct 69 TCAAGTGTTGCCGTTTTGTCTCCTCTCTCTAAGCCTCATCATCATCACTCTCGTCAAGTG 128 Query 121 ATTCGTGATCAAGAGGAGGAAGATAACATGAAGAATGTATTCAAGTTCCTTGCGGTTTCT 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129 ATTCGTGAACAAGAGGAGGAAGATAACATGAAGAATGTATTCAAGTTCCTTGCGGTTTCT 188 Query 181 AAGCCCGAGATTTCTACCGGTATTAACCGGCTTTTCAAGAGCTTCAAGACCATTTCTCAA 240 || || |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 189 AAACCGGAGATTTCTATCGGTATTAACCGGATTTTCAAGAGCTTCAAGACCATTTCTCAA 248 Query 241 CTCTTTGCTGACAAAGAAGAAGAGAAGGAAGAAGTCGAGACATCAGGAATGGAGATAGGA 300 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 249 CTCTTTGCTGACAAAGATGAAGAGAAGGAAGAAGTCGAAACATCAGGAATGGAGATAGGA 308 Query 301 GTTCCCACAAACGTAAAACATGTATCGCACATCGGATGGGAAAGCGGTTTAACCGCGGCT 360 ||||| || |||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 309 GTTCCAACGAACGTAAAACATGTATCGCACATCGGTTGGGAAAGCGGTCTAACCGCGGCT 368 Query 361 ACAGGTCCAGGTAAAGGATGGGAAGATCTCATACCACCGGAGTTGCTTGCAGCCGCTTCT 420 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 369 ACAGGTCCTGGTAAAGGATGGGAAGATCTCATACCGCCGGAGTTGCTTGCAGCCGCTGCT 428 Query 421 ACaaaaaaaGATGTTAATCCTCATCTTCACCCAACTTTATAA 462 |||||||||| |||| ||||||||||| |||||||||||| Sbjct 429 TCAAAAAAAGAAATTAACCCTCATCTTCATCCAACTTTATAA 470 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22017274062 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5