BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg326229 Length=231 Score E Sequences producing significant alignments: (Bits) Value AT5G18150.1 | Symbols: | Methyltransferase-related protein | c... 399 4e-111 AT5G14602.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 128 2e-29 > AT5G18150.1 | Symbols: | Methyltransferase-related protein | chr5:6000014-6000331 REVERSE LENGTH=231 Length=231 Score = 399 bits (216), Expect = 4e-111 Identities = 226/231 (98%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 1 ATGTGTCCGATGAGGTTCTTATTGGTTTTCTTCTCAGCTGTACTCGCCGGATATTTCGCA 60 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1 ATGTGTCCGATGAGGTTCTTATTGGTGTTCTTCTCAGCTGTACTCGCCGGATATTTCGCA 60 Query 61 TGGAAGACGGTGAGTTCTTCGCCGGAATTCGATTCACCGGACGAATTGAATGAGAAACAA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGGAAGACGGTGAGTTCTTCGCCGGAATTCGATTCACCGGACGAATTGAATGAGAAACAA 120 Query 121 GAACTCAATCTCAAAAAGAGGATGGAGAATGGGTTCTGGGTGTTCGTCGATATGGCTAGC 180 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 121 GAACTCAATCTCAAAAAGAAGATGGAGAATGGGTTTTGGGTGTTCGTCGATATGGCTAGC 180 Query 181 GGAAGATACCTTTGGAGGAATCTTAAGGAAATGAGAGAGAAAACTCAATGA 231 ||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 181 GGAAGATACCTTTGGAGGAATCTCAAGGAAATGAGAGAGAAATCTCAATGA 231 > AT5G14602.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:4709436-4709871 FORWARD LENGTH=436 Length=436 Score = 128 bits (69), Expect = 2e-29 Identities = 189/245 (77%), Gaps = 16/245 (7%) Strand=Plus/Plus Query 1 ATGTGTCCGATGAGGTTCT-TATTGGTTTTCTTCTCAGCTGTACTCGCCGGATATTTCGC 59 |||||||| |||| || | |||| || |||||||| || |||||||| |||||| |||| Sbjct 1 ATGTGTCCCTTGAGATT-TGTATTAGTGTTCTTCTCGGCGGTACTCGCAGGATATATCGC 59 Query 60 ATGGAAGACGGTGAGTTCTTCGCCGG-A--A-T-T----CGA--T-TCACCGGACGAATT 107 |||| |||||||| |||| |||||| | | | | ||| | | || | |||| Sbjct 60 GTGGAGGACGGTGAATTCTACGCCGGAACTATTCTCAGACGAGTTATTACAAGCCGAAGC 119 Query 108 GAATGAGAAACAAGAACTCAATCTCAAAAAG-AGGATGGAGAATGGGTTCTGGGTGTTCG 166 || || ||||||| |||| || || || || | |||||| |||||||| ||| ||||| Sbjct 120 CAAGGAAAAACAAGGACTCGATTTC-AAGAGAAAGATGGATAATGGGTTATGGACGTTCG 178 Query 167 TCGATATGGCTAGCGGAAGATACCTTTGGAGGAATCTTAAGGAAATGAGAGAGAAAACTC 226 | ||||||||||||||||||||||||||||| ||||| ||||| ||| | ||| || || Sbjct 179 TTGATATGGCTAGCGGAAGATACCTTTGGAGAAATCTCAAGGAGATGCGTCAGAGAAGTC 238 Query 227 AATGA 231 ||||| Sbjct 239 AATGA 243 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10405424043 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5