BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg326314 Length=252 Score E Sequences producing significant alignments: (Bits) Value AT5G19175.1 | Symbols: | Cysteine-rich protein | chr5:6449803-... 213 6e-55 > AT5G19175.1 | Symbols: | Cysteine-rich protein | chr5:6449803-6450245 REVERSE LENGTH=249 Length=249 Score = 213 bits (115), Expect = 6e-55 Identities = 211/256 (82%), Gaps = 11/256 (4%) Strand=Plus/Plus Query 1 ATGGGTATTGCAAAAAATTTGGTGATCTTTTTTCACATTGTCATCTTAGCAGTTTTGTTG 60 ||||||| | | |||| |||| | ||||||||||| ||| |||| ||||||||||| | | Sbjct 1 ATGGGTA-T-C-AAAACTTTGATTATCTTTTTTCATATTTTCATATTAGCAGTTTTATCG 57 Query 61 TCCAACGAA-ATCATTTTGGCCTCAGGTGCAGAGATCAAAAAATTCTCATATGATCATTG 119 |||||| || ||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 58 TCCAAC-AATATCATTTTGACTTCAGGTGCAGAGATCAAAAAATTCTCATATGATCATTG 116 Query 120 CTACCATTTGTGTGAGGAC-GGAGGGTATGGATCACGTGAATGCTTT-GTAGACTGTACT 177 || ||||| |||| || | || | || |||||| |||||| ||| || || ||| || Sbjct 117 CTTTCATTTATGTGTGG-CTGGCGAATACGGATCAAATGAATG-TTTCGTGGATTGTGCT 174 Query 178 GAAAAAGGATTCCGTACA-GGAGATTGTGCAAACCGAACTCCCAAAGATCCTATTAGATG 236 |||| ||||| | || ||||||||||||||||||||| |||||||||||| |||| Sbjct 175 CAAAAGGGATTTTGG-CATGGAGATTGTGCAAACCGAACTGAAAAAGATCCTATTCGATG 233 Query 237 TTGTTGCAATAACTAA 252 |||||| |||||||| Sbjct 234 TTGTTGTTATAACTAA 249 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11461046772 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5