BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg326484
Length=2547
Score E
Sequences producing significant alignments: (Bits) Value
AT5G21030.1 | Symbols: | PAZ domain-containing protein / piwi ... 3347 0.0
AT5G21150.1 | Symbols: AGO9 | Argonaute family protein | chr5:7... 1035 0.0
AT2G27040.1 | Symbols: AGO4, OCP11 | Argonaute family protein |... 150 5e-35
> AT5G21030.1 | Symbols: | PAZ domain-containing protein / piwi
domain-containing protein | chr5:7139892-7144272 REVERSE LENGTH=2553
Length=2553
Score = 3347 bits (1812), Expect = 0.0
Identities = 2328/2569 (91%), Gaps = 68/2569 (3%)
Strand=Plus/Plus
Query 1 ATGGAACGGGAATCTGTGAAGAACAAGAGTA-TACTTCTTCCAATGGCTCGGCGTGGCAA 59
|||||||| ||| || |||||| |||||||| | |||||||||||| |||| ||||||||
Sbjct 31 ATGGAACGTGAACCTTTGAAGAGCAAGAGTAGT-CTTCTTCCAATGACTCGCCGTGGCAA 89
Query 60 CGGTTCCAAAGGATC-GAAGATTCATCTTCTCACTAACCACTTTAGAGTTAACTTCAGTC 118
||||||||||||| | |||||||| ||| |||||||||||||| ||||| ||||||||
Sbjct 90 CGGTTCCAAAGGA-CAGAAGATTCTTCTGCTCACTAACCACTTCAGAGTCAACTTCAGAA 148
Query 119 AACCAAACAGTCATGATTTCTTCCATTACAGCGTTGCTATCACATATGAAGATGGTAGTC 178
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 149 AACCAAACAGTCATAATTTCTTCCATTACAGCGTTACTATCACATATGAAGATGGTAGTC 208
Query 179 CAGTTGAAGCCAAGGGTATTGGTAGAAAGATTCTTGAAAAAGTTCAACAGACTTATCAAA 238
|| || |||||| ||| |||| ||||||||||||||||||||||||||||||| ||||
Sbjct 209 CACTTTTAGCCAAAGGTTTTGGCAGAAAGATTCTTGAAAAAGTTCAACAGACTTGTCAAG 268
Query 239 CTGATTTGGGTTTCAAACACTTTGCTTATGACGGCGACAAGAATCTTT-TCACTGCCGGT 297
|||||||||||| |||||| ||||||||||| |||||||||||||||| | |||| |||
Sbjct 269 CTGATTTGGGTTGCAAACATTTTGCTTATGATGGCGACAAGAATCTTTAT-ACTGTTGGT 327
Query 298 CCTCTTCCCGGATCCAATCTAGAATTCTCTGTTGTTCTTGAAGA-CATGTCTTCTAGGAG 356
|||||||| |||||| |||||| |||||||||||||||||| | | | ||||||||||
Sbjct 328 CCTCTTCCTAGATCCAGTCTAGACTTCTCTGTTGTTCTTGAA-ACCGCGCCTTCTAGGAG 386
Query 357 AAATGCAGGCAAAAGACTAAGGCTTTCTCACCAATCCAAGAAATTCAATGTTGCAATCAG 416
||| |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 387 AAACGCAGACAAAAGACTAAAGCTTCCTCACCAATCCAAGAAATTCAATGTTGCAATCCT 446
Query 417 CTTT--G-CTGCAAAAATCCCTATGAAAGCTATTGCAAATGCTCTTCAAGGAAAGGAAAC 473
||| | || || ||||||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct 447 TTTTGCGCCTCCAGAAATCCCAATGGAAGCTATTGCAAATGCTCTTCAAGGAAAGAAAAC 506
Query 474 -AAACCATTTTCAAGATGCTATCAGAGTGATGGA-TGTTATTTTGTGCCAAAATGCAGCT 531
||| ||| ||| ||||||||||||||||||||| || ||||||| ||||||||||||||
Sbjct 507 TAAA-CATCTTCTAGATGCTATCAGAGTGATGGACTG-TATTTTGAGCCAAAATGCAGCT 564
Query 532 CGGA-AAGGTTGCCTCCTAGTTCGCCAATCTTTCTTCCACAATGATGCAAAGTACTTTAC 590
|| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| |
Sbjct 565 -AGACAAGGTTGCCTCCTAGTTCGGCAATCTTTCTTCCACAATGACGCAAAGTACTTTGC 623
Query 591 GAATATCGGTGAAGGTGTTGATTGTTGCAAAGGATTCCATTCAAGCTTCAGAACTACTCA 650
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 624 GAATATCGGTGAAGGTGTAGATTGTTGCAAAGGATTTCATTCAAGCTTCAGAACTACTCA 683
Query 651 GGGAGGCTTGTCCCTCAATATTGATGTTTCGACTACGATGATAGTAAAACCTGGTCCTGT 710
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 684 GGGAGGCTTGTCCCTCAATATTGATGTTTCGACTGCTATGATAGTAAAACCTGGTCCTGT 743
Query 711 TGTTGGTTTTCTTATTGGAAACCAAGGTGTGAAAGATCCATTCTCTATTAACTGGAAAAA 770
||||| ||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 744 TGTTGATTTTCTTATTGCAAATCAAGGTGTGAACGATCCATTCTCTATTAACTGGAAAAA 803
Query 771 GGCTAAAAGTACTCTCAAGAATCTTAGAGTTAAAGTCATCCCCTCAAATCAAGAATACAA 830
|||||||| |||||| || |||||||||||||||||| |||| |||||||||||||||||
Sbjct 804 GGCTAAAAATACTCTGAAAAATCTTAGAGTTAAAGTCCTCCCTTCAAATCAAGAATACAA 863
Query 831 GATAACCGGACTAAGTGGACTACACTGCAAAGATCAAATGTTTACTTGGAAGAAAAAGAA 890
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 864 GATAACCGGACTAAGTGGACTACACTGCAAAGATCAAACGTTTACTTGGAAGAAAAGGAA 923
Query 891 CCAAAACGGGGAAGTTGAGGAGGTTGAGATTACAGTGTTTGATTACTTCACCAAAATCCG 950
||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||||
Sbjct 924 CCAAAACAGGGAATTTGAGGAGGTTGAGATTACAGTGTCCGATTACTTCACTAGGATCCG 983
Query 951 TGACATCAAACTGCATTATTCAGGTGGCTTACCATGTATCAATGTTGGTAAGCCAAATCG 1010
||| ||| |||||| ||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct 984 TGAAATCGAACTGCGTTACTCGGGTGGCTTACCTTGTATCAATGTTGGTAAGCCAAATCG 1043
Query 1011 TCCTACCTACTTTCCCATTGAGCTCTGTGAGCTTGTATCTCTACAACGCTATACTAAAGC 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1044 TCCTACCTACTTTCCCATTGAGCTCTGTGAGCTTGTATCTCTACAACGCTATACTAAAGC 1103
Query 1071 TCTTAC-AAGTTTTCAGAGGAGTAACCTTGTCAAAGAATCAAGGCAAAACCCTCATCAAA 1129
|| || || || ||||||||||||||| |||||||||||||||| || || || ||||
Sbjct 1104 GCTAACCAAATTC-CAGAGGAGTAACCTTATCAAAGAATCAAGGCAGAATCCACAACAAA 1162
Query 1130 GAAT-GGAAGTGTTAACCAGAGCTCTCAAGAAC-AGTAATTATAGTGATGACCCAATGTT 1187
|||| || |||||||||||||||||||||| | |||||||||| |||||||||||||||
Sbjct 1163 GAATTGGT-GTGTTAACCAGAGCTCTCAAGA-CTAGTAATTATAATGATGACCCAATGTT 1220
Query 1188 GCAAGAATGTGGTGTTAGAATAGGCTCTGACTTCACTCAAGTCGAAGGTCGCTTGTTACC 1247
|||||||||||||||||| || |||||||||||||||||||||||||| ||| |||||||
Sbjct 1221 GCAAGAATGTGGTGTTAGGATTGGCTCTGACTTCACTCAAGTCGAAGGCCGCGTGTTACC 1280
Query 1248 AACACCCAAGCTTAAAGCTGGCAATGAACAAGACATCTATCCTAAGAATGGGCGTTGGAA 1307
|||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||
Sbjct 1281 AACACCAAAGCTTAAAGCTGGCAAAGAACAAGACATCTATCCTATTAATGGGAGTTGGAA 1340
Query 1308 CTTCAATAACAAGATAGTTTTTGAGTCAGCAACAGTTACTAGATGGGCCGTTGTGAACTT 1367
|||||| |||||| || | || |||||||||||||||| |||||||||||
Sbjct 1341 CTTCAAGAACAAGCCAG---------C--CA-CAGTTACTAGATGGGCTGTTGTGAACTT 1388
Query 1368 CTCTGCTCGCTGTGACCCGCGCAAGATTGTTCG-TGATTTGATCAGATGTGGAAATATGA 1426
|||||||||||||||||||| |||||| || | |||||||| |||||||||||| ||||
Sbjct 1389 CTCTGCTCGCTGTGACCCGCAAAAGATTATT-GATGATTTGACCAGATGTGGAAAGATGA 1447
Query 1427 AAGGAATTAACGTAGATCCTCCATACAAAGTTGTCTTTGAAGAAGATCCTCAGTTTAAGG 1486
||||||||||||||||| |||||||| | || |||||||||||| |||||||||||||||
Sbjct 1448 AAGGAATTAACGTAGATTCTCCATACCATGTCGTCTTTGAAGAAAATCCTCAGTTTAAGG 1507
Query 1487 ATGC-ACCAGGTTCTGTAAGAGTTGAAAAGATGTTTGAACGTTTAGAATCCACACTCGGT 1545
|||| || ||||||||||||||||| ||||||||| ||| |||| |||| | ||||||
Sbjct 1508 ATGCCACT-GGTTCTGTAAGAGTTGATAAGATGTTTCAACATTTACAATCAATACTCGGC 1566
Query 1546 GACGTTCCTCCAAATTTCCTTCTATGCATACTCGAAAAGAAAAACTCTGATGTTTATGGT 1605
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1567 GAAGTTCCTCCAAAATTCCTTCTATGCATACTCGAAAAGAAAAACTCTGATGTTTATG-- 1624
Query 1606 CCTTGGAAAAAGAAAAATCTTGTTCAA-GTTGGAATTGTGAATCAGTGTATTGCTCCTCC 1664
||||| |||||||||| || |||||||||||| || |||| ||||||
Sbjct 1625 ------AAAAA------TCTTGTTCAATGT-GGAATTGTGAAT--GT--ATTGTTCCTCC 1667
Query 1665 TCAAAACGTTAA-TGATCATTATCTCACAAATGTTCTCCTCAAGATAAATGCCAAGCTTG 1723
||||||| |||| |||||| |||||||||||| |||| || |||||||||||||||||||
Sbjct 1668 TCAAAAC-TTAAATGATCAGTATCTCACAAATCTTCTACTAAAGATAAATGCCAAGCTTG 1726
Query 1724 GTGGATTGAATTCAGTGTTGGATATGGAGCGGTCACGGG-CAATGCCTTTGGTAATGAAA 1782
|||||||||||||||| ||||||||||||| |||| || |||||||| ||||||||| |
Sbjct 1727 GTGGATTGAATTCAGTTTTGGATATGGAGCTGTCA-GGAACAATGCCTCTGGTAATGAGA 1785
Query 1783 GTTCCTACCATCATTATTGGGATGGATGTATCTCATGGTTCTCCTGGACAGTCTGATG-T 1841
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 1786 GTTCCTACCATCATTATTGGAATGGATGTATCTCATGGTTCTCCTGGACAGTCTGATCAT 1845
Query 1842 A--CCATCCATTGCCGCGGTTGTGAGCTCCAGAGAATGGCCACTGATCTCAAAATACAGG 1899
| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1846 ATACCATCCATTGCCGCGGTTGTGAGCTCCAGAGAGTGGCCACTGATCTCAAAATACAGG 1905
Query 1900 GCTTGTGTGCGTACACAGTCGCGTAAAGTTGAAATGATCGATAACCTCTTTAAACCAGTC 1959
|||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||
Sbjct 1906 GCTTGTGTGCGTACACAGTCGCCTAAAGTTGAAATGATCGATAGCCTCTTTAAACCCGTC 1965
Query 1960 TCTGACAAAGATGATGAAGGTATCATGAGGGAGCTCTTGCTTGACTTTTACTCAAGTTCT 2019
||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 1966 TCTGACAAAGATGATCAAGGTATCATGAGAGAGCTCTTGCTTGACTTTCACTCAAGTTCT 2025
Query 2020 GCAGTCAAACCCAATCACATTATTATTTTCAGGGATGGTGTGAGTGAATCTCAGTTTAAC 2079
| | ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 2026 GGAAAGAAACCGAATCACATTATCATTTTCAGGGATGGTGTCAGTGAATCTCAGTTTAAC 2085
Query 2080 CAAGTTCTTAATATTGAACTGGATCAGATGAAGCaaaaaaaCCACCACACCAAGTTCTTC 2139
||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct 2086 CAAGTTCTTAATATTGAACTGGATCAGATGATGCAAATAAACCACCACACGAAGTTCTTC 2145
Query 2140 CAGACCAGGA-GCCCTGATAATGTTCCTCCAGGAACAATAATTGATAGCAACATCTGTCA 2198
|| ||| | | ||||| ||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 2146 CAAACC-GAAAGCCCTAATAATGTTCTTCCAGGAACAATAATTGACAGCAACATCTGTCA 2204
Query 2199 CCAACACAACAATGATTTCTATCTTTGTGCTCATGCTGGAATGATTGGAACTACAAGGCC 2258
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2205 CCAACACAACAACGATTTCTATCTTTGTGCTCATGCTGGAAAGATTGGAACTACAAGGCC 2264
Query 2259 AACACATTACCATGTGCTGTATGACGAGATTGGATTTGACACAGATCAACTCCAAGAACT 2318
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 2265 AACACATTACCATGTGCTCTACGACGAGATTGGATTTGACACAGATCAACTCCAAGAACT 2324
Query 2319 TGTGCATTCCCTATCCTATGTCTACCAGCGGAGCACAACTGCAATCTCTCTTGTTGCGCC 2378
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2325 TGTGCATTCACTATCCTATGTCTACCAGCGGAGCACAACTGCCATCTCTCTTGTTGCGCC 2384
Query 2379 GATATGTTATGCTCATTTGGCGGCTGCACAGATGGGAACTGCGATGAAGTTTGAGGACAT 2438
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 2385 GATATGTTATGCTCATTTGGCGGCTGCACAGATGGCAACTGCAATGAAGTTTGAGGACAT 2444
Query 2439 TTCTGAGACTTCATCGAGCCACGGCGGGATCACCATAGCTGGAGCAGTCTCTGTGCCACC 2498
|||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||
Sbjct 2445 GTCTGAGACTTCATCGAGCCACGGCGGGATCACCACAGCTGGAGCAGTCCCTGTGCCTCC 2504
Query 2499 CATGCCGAAGCTGAACACCAATGTTGCTAGTTCAATGTTCTTCTGCTGA 2547
||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 2505 CATGCCGAAGCTGAACACCAACGTTGCTAGTTCAATGTTCTTTTGCTGA 2553
> AT5G21150.1 | Symbols: AGO9 | Argonaute family protein | chr5:7192239-7198324
FORWARD LENGTH=3018
Length=3018
Score = 1035 bits (560), Expect = 0.0
Identities = 1404/1799 (78%), Gaps = 108/1799 (6%)
Strand=Plus/Plus
Query 367 AAAAGACT-AAGGCTTTCTC-ACCAATCCAAGAAATTCAAT-GTTGCA-ATCAGCTT-TG 421
|||||| | ||||| || | ||||| | ||||||||| || |||| | || || || ||
Sbjct 576 AAAAGA-TCAAGGC-GTCCCAACCAAACTAAGAAATTC-ATGGTTG-AGATAAG-TTATG 630
Query 422 CTGCAAAAATCCCTATGAAAGCTATTGCAAATGCTCTTCAAGGAAAGGAAACAAACCATT 481
||||||| ||||| ||| | |||||||||| ||||||||||| ||||| ||| | ||
Sbjct 631 CTGCAAAGATCCCCATGCAGGCTATTGCAAGCGCTCTTCAAGGGAAGGAGACAGAGAATC 690
Query 482 TTCAAGATGCTATCAGAGTGATGGATGTTATTTTGTGCCAAAATGCAGCTCGGAAAGGTT 541
||||||| ||| | |||||| ||||| |||||||| |||| | ||||||| || ||||||
Sbjct 691 TTCAAGACGCTCTGAGAGTGCTGGATATTATTTTGCGCCAGAGTGCAGCTAGGCAAGGTT 750
Query 542 GCCTCCTAGTTCGCCAAT-CTTTCTTCCACAATGATGCAAAGTAC-TT-TACGAATATCG 598
||||||| |||||||| | |||| ||||||||||| | |||| || || ||| ||| |
Sbjct 751 GCCTCCTTGTTCGCCAGTCCTTT-TTCCACAATGACGTAAAGAACTTTGTAC--CTATTG 807
Query 599 GTGAAGGTGTTGA-TTGTTGCAAAGGATTCCATTCAAGCTTCAGAACTACTCAGGGAGGC 657
||| ||||| | | | |||||| ||| ||||||||||| |||||||||||||||||||||
Sbjct 808 GTGGAGGTG-TCAGTGGTTGCAGAGGGTTCCATTCAAGTTTCAGAACTACTCAGGGAGGC 866
Query 658 TTGTCCCTCAATATTGATGTTTCGACTACGATGATAGTAAAACCTGGTCCTGTTGTTGGT 717
|| ||||| |||||||| ||| ||||||||||||||| ||||||| ||||| |||| |
Sbjct 867 TTATCCCTGAATATTGACACTTCAACTACGATGATAGTACAACCTGGACCTGTAGTTGAT 926
Query 718 TTTCTTATTGGAAACCAAG-GTGTGAAAGATCCATTCTCTATTAACTGGAAAAAGGCTAA 776
|| || ||| |||| || ||||||||||| | || ||||||| ||||||
Sbjct 927 TTCCTGCTTGCTAACC-AGAACAAGAAAGATCCATACGGAATGGACTGGAACAAGGCTCG 985
Query 777 AAGTACT-CTCAAGAATCTTAGAGTT-AAAGTCATC-CCCTCAAATCA-AGAATACAAGA 832
| || | ||||||||||| |||||| ||| | | | | || ||| | |||||||||||
Sbjct 986 ACGT-GTCCTCAAGAATCTGAGAGTTCAAA-TTA-CTCTTTCCAAT-AGAGAATACAAGA 1041
Query 833 TAACCGGACTAAGTGGACTACA-CTGCAAAGATCAAATGTTTACTTGGAAGAAAAAGAAC 891
||| |||||||||| || ||| ||||||||||||| | ||||| |||| |||| |||
Sbjct 1042 TAAGTGGACTAAGTGAAC-ACAGCTGCAAAGATCAACTATTTACATGGAGGAAACCTAAC 1100
Query 892 CAAAACGGG-GAAGTTGAGGAGGTTGAGATTACAGTGTTTGATTACTTCACCAAA-ATCC 949
| || ||| ||| |||||||||||||||| |||||| | ||||| | | ||| | |
Sbjct 1101 GACAA-GGGAGAATTTGAGGAGGTTGAGATCACAGTGCTCAATTAC-T-A-TAAAGA-GC 1155
Query 950 GTGACATCAAACTGCATTATTCAGGTGGCTTACCATGTATCAATGTTGGTAAGCCAAATC 1009
|| |||| || ||| ||||||||||| ||| || || ||||||||||||||||| || |
Sbjct 1156 GTAACATTGAAGTGCGTTATTCAGGTGACTTCCCTTGCATCAATGTTGGTAAGCCGAAGC 1215
Query 1010 GTCCTACCTACTTTCCCATTGAGCTCTGTGAGCTTGTATCTCTACAACGCTATACTAAAG 1069
|||| || ||||| ||||||||| ||||| | ||||| |||||||| || || || |||
Sbjct 1216 GTCCCACTTACTTCCCCATTGAGTTCTGTAATCTTGTGTCTCTACAGCGATACACAAAAT 1275
Query 1070 CTCTTA-CAAGTTTTCAGAGGAG-TAACCTTG-TCAAAGAATCAAGGCAAAACCCTCATC 1126
| |||| ||| |||||||||| | | ||| | | ||| | || ||||| || || | |
Sbjct 1276 CGCTTACCAA-TTTTCAGAGG-GCTGCCCTAGTTGAAA-AGTCTAGGCAGAAGCCACCTG 1332
Query 1127 AAAGAATGGAAGT-GTTAACCAGAGCTCTCAAGAACAGTAATTATAGTGATGACCCAATG 1185
|||| |||| | | |||||| || ||| ||| |||| ||||| | || ||||| |
Sbjct 1333 AAAGGATGG-CCTCGCTAACCAAAGGTCTGAAGGACAGCAATTACAATGCCGACCCGGTA 1391
Query 1186 TTGCAAGAAT-GTGGTGTTAG-AATAGGCTCTGACTTCACTCAAGTCGAAGGTCGCT-TG 1242
||||||| || |||||||||| | || | | | || || ||||| ||||| || | |
Sbjct 1392 TTGCAAG-ATAGTGGTGTTAGCATTA-TCACCAATTTTACCCAAGTTGAAGGCCG-TATC 1448
Query 1243 TTACCAACACCCAA-GCTTAAAGCT-GGCAATGAACAAGACATCTAT-CCTAA-GAATGG 1298
||||||||| |||| ||| |||| | ||||| | | || | | || | || || || ||
Sbjct 1449 TTACCAACA-CCAATGCTGAAAG-TGGGCAAGGGAGAA-A-ACCTTTCCCCAATCAAAGG 1504
Query 1299 GCGTTGGAACTTCAATAAC--AAGATAGTTTTTGAGTCAGCAACAGTTACTAGATGGGCC 1356
|||||||| || | |||| | | |||| || | || ||||||||||||||
Sbjct 1505 AAAATGGAACTT-TAT-GCGTAAGACACTCGCTGAGCCAACGACGGTTACTAGATGGGCT 1562
Query 1357 GTTGTGAACTTCTCTGCTCGCTGTGACCCGCGCA-AGA-TTGTTCGTGATTTGATCAGAT 1414
|||||||||||||||||||||||||| | | | | || ||||||| ||||| | ||
Sbjct 1563 GTTGTGAACTTCTCTGCTCGCTGTGA--TACAAATACACTTATTCGTGACTTGATTAAAT 1620
Query 1415 GTGGA-AATATGAAAGGAATTAACGTAGATCCTCCATACAAAGTTGTCTTTGAA-GAAG- 1471
||||| | |||||||||||| ||||| ||||||| ||| | |||| | || | ||
Sbjct 1621 GTGGACGGGA-GAAAGGAATTAATGTAGAGCCTCCATTCAAGGATGTC-ATCAACG-AGA 1677
Query 1472 ATCCTCAGTTTAAGG-ATGCACCAGGTTCTGTAAGAGTTGAAAAGATGTTTGAAC-GTTT 1529
||||||||||| ||| ||||||||| | |||| ||||| || || |||||||| | | |
Sbjct 1678 ATCCTCAGTTT-AGGAATGCACCAGCTACTGTGAGAGTAGAGAATATGTTTGAGCAG-AT 1735
Query 1530 AGAATCCACACTCGGTGACGTTCCTCCAAAT-TTCCTTCTATGCATACT--C-GAAAAGA 1585
| |||||| |||| | | || || | |||||||| |||||||| | |||| ||
Sbjct 1736 AAAATCCAAACTC-CCAAAG--CCGCC-TCTGTTCCTTCTTTGCATACTCGCTGAAAGGA 1791
Query 1586 AAAACTCTGATGTTTATGGTCCTTGGAAAAAGAAA-AATCTTGTTCAAGTTGGAATTGTG 1644
||||||||||||||||||| ||||||||||| ||| ||||||||| | |||||||||||
Sbjct 1792 AAAACTCTGATGTTTATGGCCCTTGGAAAAA-AAAGAATCTTGTTGATCTTGGAATTGTG 1850
Query 1645 AATCAGTGTATTGCTCCTCCTCAAAACGTTAATGATCATTATCTCACAAATGTTCTCCTC 1704
| |||||| |||||| | || | | || | || ||||| |||||||| |||||||||||
Sbjct 1851 ACTCAGTGCATTGCT-C-CCACCAGAC-TGAACGATCAGTATCTCACCAATGTTCTCCTG 1907
Query 1705 AAGATAAATGCCAAGCTTGGTGGATTGAATTCAGT-GTTGGATATGGAGCGGTCACGGGC 1763
|||||||||||||||||||||||||||||||| || ||| | ||||||||| |||| ||
Sbjct 1908 AAGATAAATGCCAAGCTTGGTGGATTGAATTC-GTTGTTAGCTATGGAGCGCTCACCAGC 1966
Query 1764 AATGCCTTTGGTAATGAAAGTTCCTACCATCATTATTGGGATGGATGTATCTCATGGTTC 1823
|||||| |||| | ||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 1967 AATGCCAAAAGTAACGCAAGTTCCTACCATCATTGTTGGGATGGATGTATCCCATGGTTC 2026
Query 1824 TCCTGGACAGTCTGATGTACCATCCATTGCCGCGGTTGTGAGCTCCAGAGAATGGCCACT 1883
||||| ||||||||| ||||||| ||||| || ||||||||||| ||| ||||||||||
Sbjct 2027 CCCTGGCCAGTCTGATATACCATCAATTGCTGCTGTTGTGAGCTCAAGACAATGGCCACT 2086
Query 1884 GATCTCAAAATACAGGGCTTGTGTGCGTACACAGTCGCGTAAAGTTGAAATGATCGATAA 1943
||||||||||| | ||| ||||| || ||||| || || ||| | |||||||| |||||
Sbjct 2087 CATCTCAAAATATAAGGCATGTGTACGCACACAATCACGCAAAATGGAAATGATTGATAA 2146
Query 1944 CCTCTTTAAACCAGTCTCTGACAAAGATGATG-AAGGTATCATGAGGGAGCTCTTGCTT- 2001
||||| ||||| ||| || |||||| || | || || ||| | || | |||||| ||
Sbjct 2147 TCTCTTCAAACCCGTCAATGGCAAAGACGAAGGAATGT-TCA-G-GGAA-CTCTTG-TTA 2201
Query 2002 GACTTTTACT-CAAGTTCTGCAG--TC--AAACCCA-ATCACATTATTATTTTCAGGGAT 2055
|||||||||| || |||| | || | ||||| | | ||||| |||||||||||||||
Sbjct 2202 GACTTTTACTACA-GTTCAG-AGAATAGGAAACC-AGAGCACATCATTATTTTCAGGGAT 2258
Query 2056 GGTGTGAGTGAATCTCAGTTTAACCAAGTTCTTAATATTGAACTGGATCAGATGAAGCa 2114
||||| || || |||||||| || |||||||||||||||||| |||||||||||| |||
Sbjct 2259 GGTGTAAGCGAGTCTCAGTTCAATCAAGTTCTTAATATTGAATTGGATCAGATGATGCA 2317
Score = 455 bits (246), Expect = 1e-126
Identities = 372/433 (86%), Gaps = 8/433 (2%)
Strand=Plus/Plus
Query 2119 aaCCACCACACCAAGTTCTTCCAGACCAGGA-GCCCTGATAATGTTCCTCCAGGAACAAT 2177
||||||||||| |||||||||||| | || ||||||||||||||||||||||||||||
Sbjct 2379 AACCACCACACAAAGTTCTTCCAG-TCTCGAGGCCCTGATAATGTTCCTCCAGGAACAAT 2437
Query 2178 AATTGATAGCAACATCTGTCACCAACACAACAATGATTTCTATCTTTGTGCTCATGCTGG 2237
||||| ||| | |||||||||| || |||| |||||||||||| || || ||||||||
Sbjct 2438 CATTGACAGCCAGATCTGTCACCCACGCAACTTTGATTTCTATCTCTGCGCCCATGCTGG 2497
Query 2238 AATGATTGGAACTACAAGGCCAACACATTACCATGTGCTGTATGACGAGATTGGATTTGA 2297
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 2498 CATGATTGGAACTACAAGGCCAACACATTACCATGTTCTGTATGACGAGATTGGGTTTGC 2557
Query 2298 CACAGATCAAC-TCCAAGAACTTGTGCATTCCCTATCCTATGTCTACCAGCGGAGCACAA 2356
|||||| | || ||||||||||||||||||| || ||||||||||||||| ||||||| |
Sbjct 2558 CACAGA-CGACCTCCAAGAACTTGTGCATTCTCTGTCCTATGTCTACCAGAGGAGCACCA 2616
Query 2357 CTGCAATCTCTCTTGTTGCGCC-GATATGTTATGCTCATTTGGCGGCTGCACAGATGGGA 2415
|||| ||||| | ||||| || | ||||||| ||||||||||| |||||||||||||||
Sbjct 2617 CTGCGATCTCAGTCGTTGCACCTG-TATGTTACGCTCATTTGGCAGCTGCACAGATGGGA 2675
Query 2416 ACTGCGATGAAGTTTGAGGACATT-TCTGAGACTTCATCGAGCCACGGCGGGATCACCAT 2474
|||| |||||||| ||| || || ||||||||||| |||||||| || || |||||||
Sbjct 2676 ACTGTGATGAAGTATGAAGAG-TTGTCTGAGACTTCTTCGAGCCATGGAGGAATCACCAC 2734
Query 2475 AGCTGGAGCAGTCTCTGTGCCACCCATGCCGAAGCTGAACACCAATGTTGCTAGTTCAAT 2534
| ||||||||||| |||||||||| |||||| ||||| ||| |||||| | | || ||
Sbjct 2735 ACCTGGAGCAGTCCCTGTGCCACCTATGCCGCAGCTGCACAATAATGTTTCAACCTCCAT 2794
Query 2535 GTTCTTCTGCTGA 2547
||||||||| |||
Sbjct 2795 GTTCTTCTGTTGA 2807
> AT2G27040.1 | Symbols: AGO4, OCP11 | Argonaute family protein
| chr2:11536534-11542357 REVERSE LENGTH=3170
Length=3170
Score = 150 bits (81), Expect = 5e-35
Identities = 387/532 (73%), Gaps = 32/532 (6%)
Strand=Plus/Plus
Query 1593 TGATGTTTATGGTCCTTGGAA-AAAGAAAAATCTT-GTTCAAGTTGGAATTGTGAATCAG 1650
|||| | |||||||| ||||| ||| ||||| ||| | || |||| ||||| | |||
Sbjct 1898 TGATCTCTATGGTCCATGGAAGAAA-AAAAA-CTTAACTGAATTTGGCATTGTTACTCAA 1955
Query 1651 TGTATTGCTCCTCCTC-AAAACGTTAATGATCATTATCTCAC-AAATGTTCTCCTCAAGA 1708
|| || ||||| | | ||| ||||||||| ||||| || || | | || || ||||
Sbjct 1956 TGCATGGCTCCAACGCGGCAAC-CTAATGATCAGTATCTTACTAACT-TACTTCTGAAGA 2013
Query 1709 TAAATGCCAAGCTTGGTGGATTGAATTCAGTGTTGGA-TATGGAGCGGT-CACGGGCAAT 1766
| ||||| |||||||| || |||| ||| |||| | | | |||| || ||| || |
Sbjct 2014 TTAATGCAAAGCTTGGAGGCCTGAACTCAATGTT-AAGTGTAGAGC-GTACACCTGC-GT 2070
Query 1767 GC-CTTTG-GTAATGAAAGTTCCTACCATCATTATTGGGATGGATGTATCTCATGGTTCT 1824
| || || | | || ||||| ||||| || ||||||||||||| || ||||| |||
Sbjct 2071 TCACTGTGATTTCT-AAGGTTCCAACCATTATCCTTGGGATGGATGTTTCACATGGATCT 2129
Query 1825 CCTGGACAGTCTGATGTACCATCCATTGCCGCGGTTGTGAGCTCCAGAGAATGGCCACTG 1884
||||||||||||||||| || ||||| || || || ||||| || || || |||||||||
Sbjct 2130 CCTGGACAGTCTGATGTCCCGTCCATCGCTGCTGTGGTGAGTTCTAGGGAGTGGCCACTG 2189
Query 1885 ATCTCAAAATACAGGGCTTGTGTGCGTACACAGTC-GCGTAAAGTTGAAATGATCGATAA 1943
|| || ||||| || || | ||| || |||||| | | ||| | ||| ||||| ||
Sbjct 2190 ATATCCAAATATAGAGCATCTGTTCGGACACAGCCTTC-TAAGGCTGAGATGATTGA-GT 2247
Query 1944 CCTCTT-TAAACCAGTCTCTGACAAAGATGATGAAGGTATCATGAGGGAGCT-CTTGCTT 2001
|| ||| | || | | || | || || || || || || | |||| | | || |
Sbjct 2248 CC-CTTGTCAAGAAAAAT-GGA-ACTGAAGACGATGGCATTATCAAGGAGTTGC-TGGTA 2303
Query 2002 GACTTT-TACTCAAGTTCTG---CAGTCAAACCCA-ATCACATTATTATTTTCAGGGATG 2056
|| ||| ||| | || || | || ||| ||| | || || || |||||||||||||
Sbjct 2304 GA-TTTCTACACCAGCTC-GAATAAGAGAAAACCAGAGCATATCATAATTTTCAGGGATG 2361
Query 2057 GTGTGAGTGAATCTCAGTTTAACCAAGTTCTTAATATTGAACTGGATCAGAT 2108
|||||||||||||||| || || || ||||| ||||||||||| ||||||||
Sbjct 2362 GTGTGAGTGAATCTCAATTCAATCAGGTTCTGAATATTGAACTTGATCAGAT 2413
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126420696360
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5