BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg326528 Length=495 Score E Sequences producing significant alignments: (Bits) Value AT5G22180.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 573 5e-163 > AT5G22180.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:7353070-7353706 REVERSE LENGTH=510 Length=510 Score = 573 bits (310), Expect = 5e-163 Identities = 454/518 (88%), Gaps = 31/518 (6%) Strand=Plus/Plus Query 1 ATGGCAAACAGGCAGATGGAAATAGAGACCGGATTCCCAACGCCACCGTCCTCCGCCACT 60 |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ATGGCAAACAGGCATCTGGAAATAGAGACCGGATTCCCAACGCCACTGTCCTCCGCCACT 60 Query 61 GATCCTCCTCCTCCATCACGGTGGTGGACACAACTGCATTCATTATTCCTTCGTCGTAAC 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 61 GATCCTCCTCCTCCATCACGGTGGTGGACACAACTACATTCATTATTCCTTCGTCGTAAC 120 Query 121 GAACTCACTAAAGAAGAGAAATCAGCTATATTTTTAA----A---AC--CCTATT-T--- 167 ||||||||||||||||||||||||||||| || || | || ||| || | Sbjct 121 GAACTCACTAAAGAAGAGAAATCAGCTAT-TTCAAAACCCCATGTACAACCTTTTATGCC 179 Query 168 -------CTTCTCCGTCGAATCCATCTCCGTTTCCCCCTCCTCTTCCGCCACGTGGCACG 220 | ||||| |||||||||| ||||||||||||||||||||||||||| |||| Sbjct 180 ACGCCAGCGTCTCC-TCGAATCCATAACCGTTTCCCCCTCCTCTTCCGCCACGTTGCACA 238 Query 221 TTGATTTTCTCGTGAACCCGAGCTCATGGTGTCCAATCGACTACAACGGAGATGACGTGT 280 | |||||||||||||| |||||||||| |||||| ||| | ||||||||||||||||||| Sbjct 239 TCGATTTTCTCGTGAAACCGAGCTCATCGTGTCCTATCCAATACAACGGAGATGACGTGT 298 Query 281 ACGCCAAGCTAGGCTCCTTAAACGCCGCCGAGGGTAATCAAAGAGTTTTCGAATTAGACA 340 ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| Sbjct 299 ACGCCAAGCTAGGTTCCTTAAACGCCGCCG-G--TAATCAAAGAGTTTTCGAATTAGACT 355 Query 341 TGAAACTTAGCGCGAAGAAGAAA-AGTCCTGCGTATGG-ATATGAATATGGACATCTCGA 398 |||||||||| ||| ||||||| || | ||||| | | |||||||||||||||| |||| Sbjct 356 TGAAACTTAGTACGATGAAGAAACAG-CTTGCGT-TAGTATATGAATATGGACATTTCGA 413 Query 399 TATCCGGTGTCAGAATCTGACTATTGGTTATCAGAAGACTAAGTGTCATTCGTCTTTCAA 458 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 414 TATCAGGTGTCAGAATCTGACTATCGGTTATCAGAAGACTAAGTGTCATTCGTCTTACAA 473 Query 459 AGCGTTGGA-GAACACGATACCTAAGCTATTGGATTAG 495 ||||||||| || | |||||| |||||||||| ||||| Sbjct 474 AGCGTTGGATGACC-CGATACGTAAGCTATTGAATTAG 510 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23610049090 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5