BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg326545

Length=876
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G22370.1 | Symbols: EMB1705, QQT1 | P-loop containing nucleo...  1402    0.0  
  AT5G02650.1 | Symbols:  | BEST Arabidopsis thaliana protein mat...   134    2e-30


> AT5G22370.1 | Symbols: EMB1705, QQT1 | P-loop containing nucleoside 
triphosphate hydrolases superfamily protein | chr5:7406097-7408702 
FORWARD LENGTH=1195
Length=1195

 Score = 1402 bits (759),  Expect = 0.0
 Identities = 817/846 (97%), Gaps = 0/846 (0%)
 Strand=Plus/Plus

Query  1    ATGGTGTTTGGACAAGTAGTAATAGGTCCTCCTGGATCAGGCAAGACCACTTACTGCAAT  60
            |||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||
Sbjct  106  ATGGTGTTTGGACAAGTAGTAATAGGTCCTCCAGGATCGGGAAAGACCACTTATTGCAAT  165

Query  61   GGCATGTGTCAGTTCCTCTCTCTAATGGGCAGGAAGGTTGCTATTGTTAATCTGGATCCT  120
            || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  166  GGAATGTCTCAGTTCCTCTCTCTAATGGGCAGGAAGGTTGCTATTGTTAATCTGGATCCT  225

Query  121  GCAAATGATGCATTACCTTATGAATGTGCTGTGAATATAGAAGAATTGATTAAGTTAGAA  180
            ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||
Sbjct  226  GCAAATGATGCATTACCTTATGAGTGTGGTGTGAATATAGAAGAATTGATCAAGTTAGAA  285

Query  181  GATGTTATGCCGGAACACTCACTTGGTCCTAATGGAGGTCTTGTATATTGTATGGAGTAC  240
            ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  286  GATGTTATGTCGGAACACTCGCTTGGTCCTAATGGAGGTCTTGTATATTGTATGGAGTAC  345

Query  241  TTGGAGAAAAACATTGACTGGCTGGAATCTAAACTAAAGCCTCTTTTGAAGGATCATTAC  300
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  346  TTGGAGAAAAACATTGACTGGCTGGAATCTAAACTAAAGCCTCTTCTGAAGGATCATTAC  405

Query  301  ATTCTCTTTGATTTTCCTGGCCAAGTGGAATTGTTCTTCATTCATGACAGTACCAAGAAT  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  406  ATTCTCTTTGATTTTCCTGGCCAAGTGGAATTGTTCTTCATTCATGACAGTACCAAGAAT  465

Query  361  GTTCTCACGAAGCTGATAAAATCATTGAACCTTAGATTAACTGCTGTGCAACTAATTGAT  420
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  466  GTTCTCACGAAGCTGATTAAATCATTGAACCTTAGATTAACTGCTGTGCAACTAATTGAT  525

Query  421  TCCCATCTATGTTGTGATCCCGGGAACTATGTAAGCGCGTTGCTTCTCTCCTTATCCACA  480
            ||||||||||||||||||||||||||||| |||||  || | ||||||||||||||||||
Sbjct  526  TCCCATCTATGTTGTGATCCCGGGAACTACGTAAGTTCGCTACTTCTCTCCTTATCCACA  585

Query  481  ATGCTTCACATGGAACTCCCACATGTCAATGTCTTGTCTAAAATCGATCTGATTGGAAGC  540
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  586  ATGCTTCACATGGAACTCCCACATGTCAATGTATTGTCTAAAATCGATCTGATTGGAAGC  645

Query  541  TACGGAAAGCTAGCTTTCAATTTAGATTTCTATACCGATGTTCAAGACTTATCATACTTG  600
            ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  646  TACGGGAAGCTAGCTTTCAATTTAGATTTCTATACCGATGTTCAAGACTTGTCATACTTG  705

Query  601  GAGCACCATCTTAGTCAAGATCCTCGCTCTGCTAAGTACAGAAAACTAACAAAAGAGCTA  660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  706  GAGCACCATCTTAGTCAAGATCCTCGCTCTGCTAAGTACAGAAAACTAACAAAAGAGCTA  765

Query  661  TGTAGTGTTATTGAAGATTACAGTCTTGTTAATTTTACTACCTTGGATATTCAGGACAAA  720
            |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct  766  TGTAGTGTCATTGAAGATTACAGTCTTGTTAATTTTACAACCTTGGATATTCAGGATAAA  825

Query  721  GAAAGTGTTGGGAATCTAGTAAAGCTCATTGACAAGAGCAATGGATACATATTTTCTGGC  780
            |||||||||||| |||||||||||||||| |||||||||||||||||||||||| | |||
Sbjct  826  GAAAGTGTTGGGGATCTAGTAAAGCTCATCGACAAGAGCAATGGATACATATTTGCCGGC  885

Query  781  ATTGATGCAAGTGTGGTTGAATACAGCAAGATTGCGATTGGTCAAACTGATTGGGATTAT  840
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  886  ATTGATGCAAGTGTGGTTGAATACAGCAAGATTGCAATTGGTCAAACTGATTGGGATTAT  945

Query  841  AACAGA  846
            ||||||
Sbjct  946  AACAGA  951


> AT5G02650.1 | Symbols:  | BEST Arabidopsis thaliana protein match 
is: Telomerase activating protein Est1 (TAIR:AT1G28260.2); 
Has 20 Blast hits to 20 proteins in 2 species: Archae - 
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses 
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:597504-599786 
FORWARD LENGTH=988
Length=988

 Score =  134 bits (72),  Expect = 2e-30
 Identities = 91/99 (92%), Gaps = 6/99 (6%)
 Strand=Plus/Plus

Query  2    TGGTGTTTGGACAAGTAGTAATAGGTCCTCCTGGATCAGGCAAGACCACTTACTGCAATG  61
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  157  TGGTGTTTGGACAAGTAGTAATAGGTCCTCCTGGATCGGGCAAGACCACTTACTGCAATG  216

Query  62   GCATGTGTCAGT-TC----C-TCTCTCTAATGGGCAGGA  94
            |||||| ||||| ||    | ||||||||||||||||||
Sbjct  217  GCATGTCTCAGTGTCAGTGCATCTCTCTAATGGGCAGGA  255



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 42749259097


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5