BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg326585 Length=1107 Score E Sequences producing significant alignments: (Bits) Value AT5G22890.1 | Symbols: | C2H2 and C2HC zinc fingers superfamil... 1613 0.0 > AT5G22890.1 | Symbols: | C2H2 and C2HC zinc fingers superfamily protein | chr5:7653257-7654724 REVERSE LENGTH=1468 Length=1468 Score = 1613 bits (873), Expect = 0.0 Identities = 1033/1111 (93%), Gaps = 8/1111 (1%) Strand=Plus/Plus Query 1 ATGAATCGAGATGAGCATATTACAAATAAAGGAGAAGGGTCAATGTCTAGCTTCTCC-GG 59 ||||||||||||||||||||| |||| |||| ||||| ||||| |||||||||||| || Sbjct 78 ATGAATCGAGATGAGCATATTGCAAAGAAAGTTGAAGGATCAATCTCTAGCTTCTCCGGG 137 Query 60 GACGACCAGTACTTCCTCAAAACAAATCTCCCTTAATCCCGTGACCGCGGCCGGGGCAAA 119 || |||||||||||||||||||||||||| |||||||||||||| || ||||| | || Sbjct 138 GA-GACCAGTACTTCCTCAAAACAAATCTATGTTAATCCCGTGACCACGACCGGGACGAA 196 Query 120 ATCATTGGAAGAAGACGACGTTTCACTCTCCCTTCTATATAATCTGTCTACCTTACAAGA 179 |||| ||||||| ||||||||||||||||| |||||||| ||||| ||||||||||| || Sbjct 197 ATCAATGGAAGACGACGACGTTTCACTCTCTCTTCTATACAATCTATCTACCTTACATGA 256 Query 180 CAAAGTCCATCAGATCCAATCTCTGGTCAGCTTCTACATGATATCTAGTAATAACATTAA 239 ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct 257 AAAAGTCCATCAGATCCAATCTCTGGTCAGCTTCTACATGGTATCTACTAATAACATTAA 316 Query 240 TCAATACTCGGGGTCAACGTCTTTGGCCGTGGCTAACATCGGAAGTTTGGTTCAAGAGAT 299 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 317 CCAATCCTCGGGGTCAACGTCTTTGGCCGTGGCTAACATCGGAAGTTTGGTTCAAGAGAT 376 Query 300 CATTACGGCTGCTTCATCCATGTTGTACACTTGCCAACAACTCCACATCGGATCT---AA 356 ||| |||||||||||||||||||| || ||||||||||||||||| ||||||||| || Sbjct 377 CATCACGGCTGCTTCATCCATGTTATATACTTGCCAACAACTCCAAATCGGATCTAACAA 436 Query 357 CAACAGCAACGATATCGATAACGATCACACCGTAGATGCAATGGTTTTGGAGTTTTCCCG 416 ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 437 CAACAACAACGATATCGATAATGATCAAACCGTAGATGCAATGGTTTTGGAGTTTTCCCG 496 Query 417 ACAAGAAACCGACCCGGGTCATGATTTTGTGCAAGAGTCGACCAACCTTTTTGGTGTTCA 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 497 ACAAGAAACCGACCCGGGTCATGATTTTGTGCAAGAGTCGACCAACCTTTTTGGTGTCCA 556 Query 477 AGAAAGAGGACAGGTCTCGTTTCCTAACCAGAATCATGACTGGTATGACACAGAAACCCT 536 ||||||||| ||| |||||||||| ||||||||| ||| ||||| |||| |||||| | Sbjct 557 AGAAAGAGGGCAGATCTCGTTTCCCGACCAGAATCTTGATTGGTACAACACCGAAACCAT 616 Query 537 AAATCCTAAAAAAGATAAACATCGTTCTAAACCAAAACCCGGGAACTACGAGATATTGGA 596 ||| ||||||||||||||||||||||||||||||| |||||| |||||| ||| |||| Sbjct 617 AAACCCTAAAAAAGATAAACATCGTTCTAAACCAAGTTCCGGGAGCTACGATATACTGGA 676 Query 597 GCTAGACGTAGCGGACCTACTAGCGAAATACACGCATTACTGCCAGATTTGTGGGAAAGG 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 GCTAGACGTAGCGGACCTACTAGCGAAATACACGCATTACTGCCAGATTTGTGGGAAAGG 736 Query 657 GTTTAAGAGAGACGCGAATCTAAGGATGCACATGAGAGCGCACGGGGATGAGTACAAGAC 716 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 GTTTAAGAGAGACGCTAATCTAAGGATGCACATGAGAGCGCACGGGGATGAGTACAAGAC 796 Query 717 ACGCGAGGCCTTAATCAGCCCAACGAGCCAAGAAAAGAAAGGAGAATACACGTTGAAGAA 776 ||| |||||||| |||||||||||||||||||| |||||||||| |||| |||| ||||| Sbjct 797 ACGTGAGGCCTTGATCAGCCCAACGAGCCAAGACAAGAAAGGAGGATACTCGTTAAAGAA 856 Query 777 ACATTACTACTCGTGCCCTCATCAAGGGTGTAGATGGAACCAGAGACACGAGAAGTTCCA 836 |||||||||||| || ||||| || |||||||||||||||||||| ||||||||||| || Sbjct 857 ACATTACTACTCCTGTCCTCAACACGGGTGTAGATGGAACCAGAGGCACGAGAAGTTTCA 916 Query 837 ACCGTTGAAATCTGTGATTTGTGCCAAGAATCATTACAAGAGGAGTCATTGTCCTAAAAT 896 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 917 ACCGTTGAAATCTGTGATTTGCGCCAAGAATCATTACAAGAGGAGTCATTGTCCCAAAAT 976 Query 897 GTATATGTGCAGGAGATGTAGTGTGAAGCATTTCTCGGTTCTGTCTGATCTTAGGACGCA 956 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 977 GTATATGTGCAGGAGATGTAGTGTGAAGCATTTCTCGGTTCTGTCTGATCTTAGGACACA 1036 Query 957 CGAGAAGCATTGTGGGGATATAAAGTGGGTTTGCTCTTGTGGGACTAAATTTTCTAGGAA 1016 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1037 CGAGAAGCATTGTGGGGATATAAAGTGGGTTTGCTCTTGTGGGACTAAATTTTCTAGGAA 1096 Query 1017 AGACAAGCTTATGAGCCACGTTTCTTTGTTCTTGGGCCACGTACCGGCACATGGGTCGTC 1076 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1097 AGACAAGCTGATGAGCCACGTTTCTTTGTTTTTGGGCCACGTACCGGCACATGGGTCGTC 1156 Query 1077 CCAGCCGCCAACAACAATCACACTAAAGTAA 1107 | ||||||| |||| |||| ||||||||| Sbjct 1157 CAAGCCGCCGACAA---TCACCCTAAAGTAA 1184 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54266789145 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5